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Robert de Vries

@rpdevrieslab.bsky.social
418 followers 274 following 61 posts

Virologist turned glycoscientist... Associate Prof @ Utrecht University Chemical Biology & Drug Discovery

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Robert de Vries @rpdevrieslab.bsky.social · 24/11/2025
Super happy to receive an M-2 weave grant from the NWO (Dutch Research Council). Together with Sayed Abd El-Whab we will study the molecular features of H5Nx HA and NA proteins. #glycotime www.nwo.nl/en/news/gran...
nwo.nl
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Robert de Vries @rpdevrieslab.bsky.social · 26/08/2025
#glycotime alert! Zhiyong synthesized O-acetylated GD3 gangliosides, which were used to examine viral receptor specificities in a cellular context by @LiangRuonan great work by @zeshi_li and @TheBoonsGroup @uu-cbdd.bsky.social www.biorxiv.org/content/10.1...
biorxiv.org
Chemoenzymatically Synthesized O-Acetylated GD3 Gangliosides to Examine Viral Receptor Specificities in a Cellular Context
Gangliosides are a class of sialic acid-containing glycosphingolipids involved in a wide range of biological processes. The terminal sialic acid of gangliosides can be O -acetylated at C7 and/or C9 hy...
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Robert de Vries @rpdevrieslab.bsky.social · 18/07/2025
Very happy that our paper on the receptor binding properties of contemporary H3N2 viruses is now published @CellReports # glycotime www.cell.com/cell-reports...
cell.com
Epistasis in the receptor-binding domain of contemporary H3N2 viruses that reverted to bind sialylated di-LacNAc repeats
Liang et al. shows how contemporary H3N2 viruses reverted to bind sialylated di-LacNAc at the molecular level. Using complex symmetrical and asymmetric N-glycans, major epistatic interactions were rev...
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Robert de Vries @rpdevrieslab.bsky.social · 10/07/2025
And now published! #glycotime "Sialic Acid-Containing Glycolipids Extend the Receptor Repertoire of Enterovirus-D68" fantastic collaboration with @lisabauervirus.bsky.social @debbyvanriel.bsky.social @TheBoonsGroup enjoy 👍https://pubs.acs.org/doi/10.1021/acsinfecdis.5c00063
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NWO XL Consortium "Viruses like it Sweet" @viruseslikeitsweet.bsky.social · 10/07/2025
We are happy to share the first publication of our consortium: pubs.acs.org/doi/10.1021/...
pubs.acs.org
Sialic Acid-Containing Glycolipids Extend the Receptor Repertoire of Enterovirus-D68
Enterovirus D68 (EV-D68) emerged as a pathogen of increasing health concern globally, particularly due to its association with outbreaks of severe respiratory diseases and acute flaccid myelitis (AFM) in children. Knowledge regarding the tissue tropism and pathogenesis of EV-D68 within the respiratory tract and central nervous system remains limited, primarily due to an incomplete understanding of the host factors that facilitate the entry of EV-D68 into host cells. Several cellular receptors involved in EV-D68 infections have been identified, including ICAM-5, sialylated glycoproteins, and heparan sulfate (HS). Here, we investigate the receptor requirement of a panel of EV-D68 strains covering all clades, focusing on HS and sialosides utilizing glycan arrays. We found that all EV-D68 strains binding to HS harbor a cell culture adaptive substitution in the structural protein VP1 at position 271, which changes the amino acid into a positively charged one. Glycan array analyses revealed that EV-D68 strains prefer α2,6-linked sialic acids presented on N-glycans, α2,8-linked sialic acids on gangliosides, or both. Inhibition of glycolipid biosynthesis or multivalent glycolipid mimics confirmed that ganglioside structures serve as entry receptors for certain EV-D68 strains. Lastly, we examined whether EV-D68 strains that bind to HS or glycolipids require different uncoating mechanisms. Bafilomycin A1 minimally affected the cell entry of HS-binding EV-D68 strains B2/039 and B2/947, and the ganglioside preferring B1/2013 and other viruses were strongly inhibited. Together, we identified that EV-D68 strains can use disialoglycolipids as novel receptors and that different EV-D68 strains show a promiscuous sialic acid binding repertoire.
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Robert de Vries @rpdevrieslab.bsky.social · 19/06/2025
New paper of Yunfei! Here, he synthesized sulfonates in different sialylated epitopes... although not better ligands for most lectins tested, they were tolerated and even preferred by siglec-4. #glycotime pubs.acs.org/doi/10.1021/...
pubs.acs.org
Chemoenzymatic Synthesis and Biological Recognition of a Sulfonate Isostere of 6-Sulfo-sialyl Lewisx
Sulfation of N-acetylglucosamine (GlcNAc) moieties of glycans is a common modification that has been implicated in many biological and disease processes. Glycans having sulfate replaced by a stable an...
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Robert de Vries @rpdevrieslab.bsky.social · 27/05/2025
What a great thread and very interesting preprint 👍
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Robert de Vries @rpdevrieslab.bsky.social · 17/05/2025
Happy Eurovision! Basel is awesome, getting ready for the final!🏳️‍🌈🇫🇮
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Robert de Vries @rpdevrieslab.bsky.social · 12/05/2025
Bijvoet symposia 👍 #glycotime @uu-cbdd.bsky.social
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Robert de Vries @rpdevrieslab.bsky.social · 09/05/2025
Happy to be able to contribute to this very cool preprint Characterization of the glycoproteins of novel fish influenza B-like viruses #glycotime #lovevirology @uu-cbdd.bsky.social www.biorxiv.org/content/10.1...
biorxiv.org
Characterization of the glycoproteins of novel fish influenza B-like viruses
Novel influenza-like virus sequences previously identified in fish and amphibians were found to cluster as a sister clade of influenza B viruses, but have thus far remained uncharacterized. We demonst...
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Robert de Vries @rpdevrieslab.bsky.social · 25/04/2025
Excited to have this story out on bioRxv! #glycotime #lovevirology #H5N1 The receptor binding properties of H5Nx influenza A viruses have evolved to promiscuously bind to avian-type mucin-like O-glycans. www.biorxiv.org/content/10.1...
biorxiv.org
The receptor binding properties of H5Nx influenza A viruses have evolved to promiscuously bind to avian-type mucin-like O-glycans
Highly pathogenic H5Nx influenza A viruses are causing unprecedented, season-independent outbreaks across avian and mammalian species, including dairy cattle, a novel reservoir. The sialoside-binding ...
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Robert de Vries @rpdevrieslab.bsky.social · 24/04/2025
Now published in PNAS, this is a fantastic paper on how HA moves within a virion upon receptor binding. By the way, do check the #badglycans in Figure 6 😐 www.pnas.org/doi/10.1073/...
pnas.org
PNAS
Proceedings of the National Academy of Sciences (PNAS), a peer reviewed journal of the National Academy of Sciences (NAS) - an authoritative source of high-impact, original research that broadly spans...
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Debby van Riel @debbyvanriel.bsky.social · 17/04/2025
We a looking for a Postdoc! Interested in virology, stem-cell derived models, glycans? Apply before 29th of October! @thijskuiken.bsky.social @lisabauervirus.bsky.social @marionkoopmans.bsky.social @rpdevrieslab.bsky.social www.werkenbijerasmusmc.nl/en/vacancy/1...
werkenbijerasmusmc.nl
Vacature: Postdoc Virology
The department of Viroscience at the Erasmus MC and the department of Chemical Biology & Drug discovery at Utrecht University have joined forces to identify functional glycan receptors for influenza A...
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Robert de Vries @rpdevrieslab.bsky.social · 16/04/2025
Now out in Nature! Bovine H5 maintains binding to avian-type receptors. #glycotyme #H5N1 @uu-cbdd.bsky.social www.nature.com/articles/s41...
nature.com
Receptor-binding specificity of a bovine influenza A virus - Nature
Nature - Receptor-binding specificity of a bovine influenza A virus
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Robert de Vries @rpdevrieslab.bsky.social · 16/04/2025
Happy to have this story now published in @PNAS The Q226L mutation can convert a highly pathogenic H5 2.3.4.4e virus to bind human-type receptors | PNAS #glycotime www.pnas.org/doi/10.1073/...
pnas.org
PNAS
Proceedings of the National Academy of Sciences (PNAS), a peer reviewed journal of the National Academy of Sciences (NAS) - an authoritative source of high-impact, original research that broadly spans...
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NWO XL Consortium "Viruses like it Sweet" @viruseslikeitsweet.bsky.social · 09/04/2025
#Viruseslikeitsweet is online! We are a consortium of the department of Viroscience @erasmusmc.bsky.social and the department of Chemical Biology & Drug discovery @utrechtuniversity.bsky.social Follow our progress here or via our Linked-In account: NWO-XL Consortium Viruses like it Sweet
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Robert de Vries @rpdevrieslab.bsky.social · 09/04/2025
This will be tons of fun.... 👍
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Robert de Vries @rpdevrieslab.bsky.social · 21/03/2025
Finally! A group picture! Enjoying the DAVS #lovevirology
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Robert de Vries @rpdevrieslab.bsky.social · 21/03/2025
The DAVS is always a blast! Happy to have it in Utrecht. Fyi same location for glycoscienceNL late June 😉
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Daniel Bojar @dbojar.bsky.social · 21/03/2025
Here comes the most complex non-human milk glycome! 🥁 >300 milk oligosaccharides in grey seals, analyzed over the lactation period (+metabolomics! +functional experiments!) Next to increasing known milk glycans by >20% we also present mega-milk glycans (28 sugars!!) www.biorxiv.org/content/10.1...
biorxiv.org
Seal milk oligosaccharides rival human milk complexity and exhibit functional dynamics during lactation
Breast milk oligosaccharides are crucial for neonatal development and health. Yet most milk research focuses on humans, or domesticated mammals that are historically poor in milk oligosaccharide compl...
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Robert de Vries @rpdevrieslab.bsky.social · 17/03/2025
I have a PhD position open in my lab! viruses and glycans... who does not love that combo😉. Please share!. #glycotime #lovevirology www.uu.nl/en/organisat...
uu.nl
PhD Position in Virus-Glycan Interactions
If you're ready to solve virus-glycan interaction puzzles and shape the future of novel in vitro models, join us!
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Colin Parrish @colinparrish.bsky.social · 07/03/2025
The epidemiology and evolution of H3N2 canine influenza virus in dogs over 20 years. Lead by @brianrwasik.bsky.social shows that spread is determined by the dog population structure. The virus has not become better at transmitting in dogs after 1000s of transfers. pubmed.ncbi.nlm.nih.gov/40040347/
The patterns of recent canine influenza virus spread and evolution in the USA between 2021 and 20224.
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Jurre Y. Siegers @jsiegers.bsky.social · 25/02/2025
Cambodia reports second fatal human #H5N1 case in 2025 in a 2 y/o child from Prey Veng province on Feb 25. Exposure to sick and dead chickens near his home. #Avian #influenza remains a serious threat. Strengthening #OneHealth surveillance and response is critical. #BirdFlu
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KNAW - Koninklijke Nederlandse Akademie van Wetenschappen @knaw-nl.bsky.social · 11/02/2025
Onderzoeker en viroloog John van der Oost wint de #Beijerinck #Virologie Prijs voor zijn CRISPR-Cas onderzoek. Early career onderzoekers Carmen Embregts & Puck van Kasteren ontvangen de #BeijerinckPremie. www.knaw.nl/nieuws/voorb... @rdo-erasmusmc.bsky.social @rivm-nl.bsky.social @w-u-r.bsky.social
John van der Oost, fotocredit Rafaël PhilippenCarmen EmbregtsPuck van Kasteren
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Robert de Vries @rpdevrieslab.bsky.social · 31/01/2025
Now out in structure... I really question the biological relevance, as in a virus, the NA will take care of that SIA 😉 www.sciencedirect.com/science/arti...
sciencedirect.com
Structure of a zoonotic H5N1 hemagglutinin reveals a receptor-binding site occupied by an auto-glycan
Highly pathogenic avian influenza has spilled into many mammals, most notably cows and poultry, with several dozen human breakthrough infections. Zoon…
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Robert de Vries @rpdevrieslab.bsky.social · 22/01/2025
Save the date! June 27th is our 3rd GlycoScienceNL symposium...Geertekerk Utrecht! major #glycotime! @uu-cbdd.bsky.social @uuuips.bsky.social nvbmb.kncv.nl/glycoscience Please tag and RT at will!
nvbmb.kncv.nl
Glycoscience NL - NVBMB
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Robert de Vries @rpdevrieslab.bsky.social · 20/01/2025
Please see this fantastic thread by @lisabauervirus.bsky.social about our recent preprint on the glycan binding properties of enteroviruses. It was great working with her team at @erasmusmc.bsky.social and, with @debbyvanriel.bsky.social, as we started this project some years ago. #glycotime
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Robert de Vries @rpdevrieslab.bsky.social · 13/01/2025
We have a new preprint on the receptor specificity of 2.3.4.4 H5 viruses. We introduced the hallmark Q226L mutation in several antigenic backgrounds and observed different phenotypes. #H5N1 #glycotime www.biorxiv.org/content/10.1...
biorxiv.org
The Q226L mutation can convert a highly pathogenic H5 2.3.4.4e virus to bind human-type receptors
H5Nx viruses continue to wreak havoc in avian and mammalian species worldwide. The virus distinguishes itself by the ability to replicate to high titers and transmit efficiently in a wide variety of h...
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Robert de Vries @rpdevrieslab.bsky.social · 02/01/2025
Happy new year all... look what i just found in the graphical abstract... #badglycans www.sciencedirect.com/science/arti...
sciencedirect.com
Identification of a broad-inhibition influenza neuraminidase antibody from pre-existing memory B cells
Identifying broadly reactive B precursor cells and conserved epitopes is crucial for developing a universal flu vaccine. In this study, using influenz…
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Robert de Vries @rpdevrieslab.bsky.social · 19/12/2024
Save the date! #glycotime @uu-cbdd.bsky.social
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Robert de Vries @rpdevrieslab.bsky.social · 18/12/2024
The ESWI awards application season will start early next year. Submit your paperwork! @eswinfluenza.bsky.social eswiconference.org/eswi-awards/
eswiconference.org
The Tenth ESWI Influenza Conference - Valencia 2025
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U Utrecht-CBDD @uu-cbdd.bsky.social · 18/12/2024
Hello, Bluesky community! Let our first post be a good news: CBDD researchers Geert-Jan Boons and Rob de Vries (@rpdevrieslab.bsky.social), together with researchers in ErasmusMC Rotterdam, were awarded an #ENW-XL from the Dutch Research Council. Stay tuned for #phd/#post-doc openings! #glycotime
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Robert de Vries @rpdevrieslab.bsky.social · 18/12/2024
Another win in the yearly students vs teachers volleyball tournament organized by "Unitas Pharmaceuticorum"... @uuuips.bsky.social @lightzone.bsky.social
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Robert de Vries @rpdevrieslab.bsky.social · 16/12/2024
I'm super excited that our consortium has been funded by the NWO! Can't wait to get started! @debbyvanriel.bsky.social @lisabauervirus.bsky.social @uuuips.bsky.social #glycotime www.nwo.nl/en/news/64-m...
nwo.nl
64 million euros for groundbreaking fundamental research projects | NWO
21 research consortia have the chance to reach a breakthrough thanks to funding from the ENW-XL Open Competition. From fundamental research on the effects of certain materials on the methane cycle to ...
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Robert de Vries @rpdevrieslab.bsky.social · 12/12/2024
Happy belated secret sinterklaas! @mriosc.bsky.social @uuuips.bsky.social
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Debby van Riel @debbyvanriel.bsky.social · 02/12/2024
1/ Our recent publication is online. We show that a clade 2.3.4.4b H5N1 virus attaches to, and replicates more efficiently in human respiratory epithelium than a clade 2.3.2.1 H5N1 virus that circulated in 2005. www.biorxiv.org/content/10.1...
biorxiv.org
A 2022 avian H5N1 influenza A virus from clade 2.3.4.4b attaches to and replicates better in human respiratory epithelium than a 2005 H5N1 virus from clade 2.3.2.1
Background Highly pathogenic avian influenza (HPAI) H5 viruses of the A/Goose/Guangdong/1/1996 (GsGd) lineage pose significant global risks to wildlife, domestic animals, and humans. Recent cross-spec...
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Micah G. Allen @micahgallen.com · 02/12/2024
Would you like to see @biorxivpreprint.bsky.social add a share to blue sky button?! I know I would! Share this post to let @richardsever.bsky.social @erictopol.bsky.social and others at bioarxiv know!
A screenshot of a paper on bioarxiv illustrating the lack of blue sky share button!
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Robert de Vries @rpdevrieslab.bsky.social · 27/11/2024
A new preprint is online! Ruonan Liang made a major effort to decipher how the most recent human H3N2 viruses evolved to bind "simpler" glycans compared to isolates before 2020. #glycotime www.biorxiv.org/content/10.1...
biorxiv.org
Epistasis in the receptor binding domain of contemporary H3N2 viruses that reverted to bind sialylated diLacNAc repeats
Since the introduction of H3N2 influenza A viruses in the human population, these viruses have continuously evolved to escape human immunity, with mutations occurring in and around the receptor bindin...
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Ed Hutchinson @socialinfluenza.bsky.social · 22/11/2024
Do you want to become a virologist? The @CVRinfo PhD programme is now recruiting for both UK and international applicants - rotate in two labs then choose a project tailored to your interests. Also you get to live in Glasgow, which is fab. Please RT! www.findaphd.com/phds/program...
A photo of the Sir Michael Stoker Building, a research centre housed inside a golden metal cube, against the parkland of the Garscube campus as the sun rise lights up the clouds above the Campsie Fells. Image Credit: Rob Gifford.
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Robert de Vries @rpdevrieslab.bsky.social · 18/11/2024
First post here... let's check it out... last days to apply for a PhD position in my lab! Looking for glyco and viro enthusiasts. #glycotime #lovevirology @eakarlsson.bsky.social www.uu.nl/en/organisat...
uu.nl
PhD Position in H5Nx Virus Evolution and Host Interactions
Dive into the captivating world of virus-host interactions and help us redefine how to assess/predict zoonotic influenza outbreaks.
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