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Rohini Janivara

@rohinijanivara.bsky.social
108 followers 261 following 4 posts

Postdoc at Yale School of Medicine Population Genetics | Cancer Evolution

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Reposted by Rohini Janivara
Adam Auton @adamauton.bsky.social · 18/09/2026
What can we learn about a single rare variant? Published today in Science: the 23andMe Research Institute and Dana-Farber studied the EGFR T790M in 10.1M 23andMe research participants. The variant has OR = 25.2 for lung cancer, rising to 61.7 in never-smokers(!). 🧵
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Reposted by Rohini Janivara
Tom Sasani @tomsasani.bsky.social · 02/09/2026
How long does DNA damage last? @aaronquinlan.bsky.social and I found evidence that lesions are transmitted from parent (P0) to offspring (F1) in C. elegans. If they segregate unrepaired for multiple cell divisions, lesions generate multi-allelism in the F1 germline. www.biorxiv.org/content/10.6...
biorxiv.org
Inherited DNA damage generates multi-allelic mutations in C. elegans
Exogenous and endogenous mutagens generate a wide variety of DNA lesions, including bulky adducts, chemical modifications, and single- or double-stranded breaks. A phenomenon called “lesion segregation,” in which lesions evade repair and persist for multiple cell divisions, has recently been documented in tumors and healthy somatic tissues from mice and humans, respectively. Persistent lesions can generate multi-allelic variants (MAVs) by serving as templates for multiple rounds of error-prone replication. By reanalyzing data from a large C. elegans mutagenesis experiment, we observed robust evidence for MAVs at a small fraction (∼0.2%) of mutated sites in the offspring of strains treated with alkylating agents. Because these sequencing data were derived from the progeny of a single F1 animal — itself the offspring of a mutagenized P0 — all mutations should be biallelic. The presence of multi-allelic variation implies that some DNA lesions are transmitted to the F1 zygote, evade repair, and are repeatedly bypassed by error-prone polymerases during embryogenesis. We suspect that many more lesions are inherited than is suggested by MAV prevalence, and that a large fraction of biallelic mutations are also caused by inherited lesions. Our results demonstrate that DNA lesions serve as durable, transgenerational templates for mutagenesis in C. elegans . We speculate that lesion segregation in the early embryo may be a source of mosaicism and genetic diversity in humans, as well. ### Competing Interest Statement The authors have declared no competing interest. National Institutes of Health, https://ror.org/01cwqze88, R01HG012252
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Yale Cancer Center @yalecancer.bsky.social · 27/07/2026
A new study published in @nature.com by @s-j-aitken.bsky.social shows how an individual's inherited genetic background shapes cancer risk, how tumors evolve, and how aggressively they progress + could lead to more personalized cancer prevention and treatment. medicine.yale.edu/cancer/publi...
medicine.yale.edu
Genetic Background Shapes Cancer Evolution and Tumor Progression
This study investigates how genetic background affects cancer evolution, showing that inherited genetic differences shape tumor growth, driver mutations, and
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Reposted by Rohini Janivara
Dan Schrider @samurscicop.bsky.social · 31/05/2026
Andy Kern, who doesn't (really) have an account here, would like to share his group's new tool for speeding up pop gen summary stat calculations using GPUs. Check it out here: www.biorxiv.org/content/10.6... And see his thread over at the other place: x.com/pastramimach...
biorxiv.org
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Sasha Gusev @sashagusevposts.bsky.social · 21/11/2025
I wrote a little bit about the "missing heritability" question and several recent studies that have brought it to a close. A short 🧵
theinfinitesimal.substack.com
The missing heritability question is now (mostly) answered
Not with a bang but with a whimper
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American Society of Human Genetics (ASHG) @geneticssociety.bsky.social · 21/05/2026
What does it really mean for a trait to be “polygenic”? @lukeoconnor.bsky.social & Guy Sella, authors of @ajhgnews.bsky.social's latest article, define polygenicity from first principles, introducing clear, quantitative measures: bit.ly/49bCsld #ASHG #HumanGenetics #GeneticsDiscoveries
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Rohini Janivara @rohinijanivara.bsky.social · 09/02/2026
Thank you @s-j-aitken.bsky.social for the warm welcome! So pumped to join the team and study tiny tweaks reshaping (evolutionary) history 🧬⚡️🦀
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Reposted by Rohini Janivara
Jason Moore @moorejh.bsky.social · 18/12/2025
Did you know that OpenAI buys stock in AMD, announces it will buy a crapton of chips, then sells the stock to use the proceeds to buy said chips? Crazytown
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Reposted by Rohini Janivara
bioRxiv & medRxiv @biorxiv-medrxiv.bsky.social · 13/11/2025
Jacob Scott, a founding bioRxiv and medRxiv Affiliate with 73 preprints posted, loves the community of open science advocates around the preprint servers. Thanks to Affiliates like him, preprints are posted ~48 hours after submission. #bioRxiv #openRxiv #OpenScience #preprints #CommunityVoices
bioRxiv Community Voices graphic featuring Jacob Scott, from Case Western Reserve University (USA). The post has a headshot of Jacob and the quote "Scientific advances are too important to hide behind paywalls." The footer says "bioRxiv and medRxiv are preprint servers of openRxiv."
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Reposted by Rohini Janivara
Avery Davis Bell @averydb.bsky.social · 16/10/2025
Did you know that the genes for critical, ancient components of protein synthesis machinery - tRNAs - are bombarded with mutations, leading to remarkable allelic diversity that likely has functional consequences? I didn't until we did this project! Preprint: www.biorxiv.org/content/10.1... (1/2)
biorxiv.org
Nuclear-encoded tRNA genes harbor substantial allelic diversity in three nematode species
Cytosolic transfer RNAs, which are encoded as hundreds of genes in eukaryotic nuclear genomes, experience exceptionally high rates of mutation and have been hypothesized to carry significant mutationa...
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Reposted by Rohini Janivara
Dana-Farber News @danafarbernews.bsky.social · 10/10/2025
What’s known about early-onset cancer and what someone can do to mitigate their risk? Learn more in this in-depth conversation and podcast with The Harvard Gazette, featuring @danafarber.bsky.social’s @timrebbeck.bsky.social and Dr. Kimmie Ng. ➡️ bit.ly/46HoHdg
bit.ly
Cancer is rising among younger people - why? - Harvard Gazette
In podcast, experts outline potential factors driving trend and how to reduce risk.
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Reposted by Rohini Janivara
Dmitri Petrov @petrovadmitri.bsky.social · 25/06/2025
So happy and so proud! @alisonfeder.bsky.social keeps hitting it out of the park and so appropriately gathering all the accolades! members.smbe.org/news/Details...
members.smbe.org
SMBE 2025 Faculty Award Winners
SMBE is delighted to announce our 2025 Faculty Award Winners! Early-Career Excellence Award winner: Alison Feder Alison Feder is an Assistant Professor of Genome Sciences at the University of Washingt...
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Rohini Janivara @rohinijanivara.bsky.social · 21/06/2025
How do clonal interference and time-varying selection shape mutation trajectories and population variation in tumor evolution? I'll be diving into this question with insights from simulated tumors at #Evolution2025. Join me to explore how dynamic selection reshapes the adaptive landscape.
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Reposted by Rohini Janivara
Sasha Gusev @sashagusevposts.bsky.social · 04/05/2025
Number of genetic differences between random pairs of African individuals (black points) and a corresponding random European (blue points). 20 random samples. One instance: a person from Russia has fewer differences to a Kenyan than that same Kenyan to a Namibian.
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Yale Cancer Center @yalecancer.bsky.social · 02/05/2025
Congratulations to Drs. @jeffreytownsend.bsky.social and Anna Barker, who received @theaacr.bsky.social awards at #AACR25 "in recognition of outstanding guidance and visionary leadership" for their longstanding service as co-chairs of the Cancer Evolution Working Group. @yalesph.bsky.social
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Rohini Janivara @rohinijanivara.bsky.social · 09/04/2025
🌟 New study alert @hggadvances.bsky.social! We examine the genetic architecture and evolutionary roots of male pattern baldness in African populations, revealing critical evolutionary insights into polygenic risk portability Delighted to advance this work with the MADCaP consortium!
sciencedirect.com
Uncovering the genetic architecture and evolutionary roots of androgenetic alopecia in African men
Androgenetic alopecia is a highly heritable trait. However, much of our understanding about the genetics of male-pattern baldness comes from individua…
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