Sign in

Pleuni Pennings

@pleunipennings.bsky.social
2.4K followers 1.9K following 415 posts

Researcher, evolution of drug resistance, modeling, population genetics, coding, no longer at SF State University, instead at the U of Montpellier. Mom, Dutch, now immigrant in France.

PostsRepliesMedia
Pleuni Pennings @pleunipennings.bsky.social · 3h
Big demonstrations today in Montpellier to support the high school students. Uni closed. School half closed.
061
Pleuni Pennings @pleunipennings.bsky.social · 01/10/2026
The joy and misery of reading the proofs of a paper.
Drawing of person (me with glasses and curly hair) with two heads looking at a white paper that says "proofs". The left head is happy and thinks: oh my shiny proofs, my words never looked so professional. The right head looks unhappy and thinks: Did I write that ugly sentence? Ouch!
1121
Pleuni Pennings @pleunipennings.bsky.social · 29/09/2026
I am hiring a postdoc! Are you interested to work on population genetics/ drug resistance/ data? Want to work in Montpellier, France? Fastq files don't scare you? PhD required, start date hopefully Nov 1! (end date Sep 30 2028) Please share! abetterscientist.wordpress.com/2026/09/29/p...
abetterscientist.wordpress.com
Postdoc position on drug resistance evolution in Montpellier, France
I have some exciting news (again!). I got money from the region (Occitanie) to hire a postdoc (and later an engineer / technician) to work on drug resistance evolution in malaria (P. faciparum) and…
174101
Pleuni Pennings @pleunipennings.bsky.social · 22/09/2026
I had never heard this cool story about a strike in Dublin about South-African grapefruits, but these women should get a wikipedia page. www.ireland.ie/en/southafri...
ireland.ie
Mary Manning, Dunnes Stores striker | Ireland.ie
In July 1984, 11 employees at a Dunnes Stores location in Dublin initiated a strike regarding their refusal to process products from South Africa.
230
Pleuni Pennings @pleunipennings.bsky.social · 20/09/2026
I found this article super interesting and it made me think about the years I taught at @sfstatebio.bsky.social trying to get students ready for whatever they wanted to do ... 1/2
132
Pleuni Pennings @pleunipennings.bsky.social · 18/09/2026
Today Lucy Moctezuma Tan, Faye Orcales and I published a comment in PLOS Comp Bio about accuracy, F1 scores and other machine learning stuff relevant for antibiotic resistance predictions. abetterscientist.wordpress.com/2026/09/18/n...
abetterscientist.wordpress.com
Note on evaluation metrics published today
Summary of the publicationsPaper; Orcales et al 2024, Genomics and machine learning to predict drug resistance. Comment: Chicco and Jurman 2025: Better use MCC.Response: Moctezuma Tan et al 2026: W…
100
Pleuni Pennings @pleunipennings.bsky.social · 18/09/2026
cool job if you want to write about science and data ourworldindata.org/hiring-write...
ourworldindata.org
We’re looking for a writer
We’re hiring a writer who can make the world’s largest problems understandable to our large Our World in Data audience.
030
Pleuni Pennings @pleunipennings.bsky.social · 18/09/2026
I am having fun drawing and writing for my book on drug resistance. Currently working on a chapter on single dose nevirapine (sdNVP) which used to be used to prevent the infection of babies during labor. I wanted to make clear that sdNVP is only one way that HIV drugs can prevent infections.
Mostly handdrawn chart that describes the different ways that HIV drugs can be used to prevent HIV infection. The first question is : Who is at risk? To the left is the option: "A baby" and to the right is the option "not a baby"
160
Pleuni Pennings @pleunipennings.bsky.social · 16/09/2026
My colleague @saismit.bsky.social and @satavisha-de.bsky.social write about the lack of female representation in STEM and how this is a bigger problem even for women of color.
064
Pleuni Pennings @pleunipennings.bsky.social · 16/09/2026
Filing under good news / people w spines 😀 www.theguardian.com/us-news/2026...
theguardian.com
All supporting acts withdraw from Ed Sheeran’s tour in solidarity with Macklemore
Four openers and live band for Sheeran’s tour depart after removal of Macklemore over ‘free Palestine’ comments
070
Reposted by Pleuni Pennings
R5_to_philly / R5Philly @r5-to-philly.bsky.social · 14/09/2026
youtu.be/fgDQyFeBBIo?...
youtu.be
MACKLEMORE - HIND'S HALL
YouTube video by Macklemore
101
Reposted by Pleuni Pennings
R5_to_philly / R5Philly @r5-to-philly.bsky.social · 14/09/2026
youtube.com/shorts/4f2FJ...
youtube.com
Macklemore delivers pro-Palestinian remarks during Ed Sheeran concert
YouTube video by USA TODAY
221
Reposted by Pleuni Pennings
Martin A. Nuñez @martin-nunez.bsky.social · 10/09/2026
Before writing an introduction, make a one-line roadmap for each paragraph. Then read only those lines. Do they form a logical argument? If not, reorganize the roadmap before polishing the text. 🌐🧪
description of a outline of a scientific paper
1124
Pleuni Pennings @pleunipennings.bsky.social · 03/09/2026
Brilliant
021
Pleuni Pennings @pleunipennings.bsky.social · 01/09/2026
This looks to me like an interesting plan for a new college. www.npr.org/2026/09/01/n...
npr.org
A makeover for college: No gym, no meal plan and two years of work
A new model in Vermont emphasizes hands-on learning while stripping away frills like gyms and meal plans that increase costs. Other newly created institutions are also reimagining college.
000
Pleuni Pennings @pleunipennings.bsky.social · 28/08/2026
I wrote a blog post about writing a grant but realized that I should also share the news that I got a permanent job in France! I will stay in Montpellier at @isemevol.bsky.social. 😁 abetterscientist.wordpress.com/2026/08/28/a...
abetterscientist.wordpress.com
A blog about a grant proposal but first some good news
I got a permanent research job in France! Starting in October I will be a CNRS researcher (directeur de recherche), which means I can spend all my time on research here in Montpellier at the ISEM i…
7597
Reposted by Pleuni Pennings
Nadia Ezzeroili 🇳🇱 @nadiaezzeroili.bsky.social · 26/08/2026
11298108
Pleuni Pennings @pleunipennings.bsky.social · 23/08/2026
Great article by @nadiabouras for those who read Dutch.
022
Pleuni Pennings @pleunipennings.bsky.social · 22/08/2026
broligarchy.substack.com/p/the-jason-... A thoughtful piece about the role of the mainstream press in the Jason Arday story and a call for chief safety officers to support academics and journalists who need it.
broligarchy.substack.com
The Jason Arday Reckoning
The attempts to cover up the complicity of the UK media’s role in his death may be its sickest move yet
030
Reposted by Pleuni Pennings
Carole Cadwalladr @carolecadwalla.bsky.social · 20/08/2026
A professor writes: (Jason Stanley) The problem is that journalists failed to do basic journalism. Not a single reporter seems to have checked’ Jason Arday’s citations. The ‘quantifiable metrics’ of his work. Prof Stanley did: ‘Arday is easily comparable to the leading scholars in the field’
6126801064
Pleuni Pennings @pleunipennings.bsky.social · 19/08/2026
Worth reading about the people who wanted to get rid of Prof Arday. It's awful.
020
Pleuni Pennings @pleunipennings.bsky.social · 13/08/2026
we went to see the eclipse in spain!
040
Reposted by Pleuni Pennings
IDDjobs @iddjobs.org · 05/08/2026
PhD position (London, UK) Modelling for UK Measles Transmission with @ngdavies.bsky.social @rozeggo.bsky.social @alxsrobert.bsky.social at LSHTM @cmmid-lshtm.bsky.social More details: iddjobs.org/jobs/2572
099
Pleuni Pennings @pleunipennings.bsky.social · 30/07/2026
Students come up with some quite sensible AI rules for schools. Nice NPR article. www.npr.org/2026/07/30/n...
npr.org
Adults have struggled to set rules for AI in school. These teens figured it out
Should students be allowed to use AI on assignments? What about on tests? Who should teach AI literacy? About 100 teenagers got together to try to decide.
110
Reposted by Pleuni Pennings
Chris Scullion @scully1888.bsky.social · 20/07/2026
If you haven't seen it yet, BBC's montage at the end of the World Cup was fucking tremendous www.youtube.com/watch?v=20Fi...
youtube.com
BBC FIFA World Cup 2026 Closing Montage
YouTube video by Pick Six Productions Xtra
241081377
Pleuni Pennings @pleunipennings.bsky.social · 18/07/2026
thank you @wtf-r-species.bsky.social @peterlaurin.bsky.social @gcbias.bsky.social @jamiecweir.bsky.social Now my paragraph has more meat. The peppered moth is one of the best known examples of an organism adapting to a changing environment. ...
110
Pleuni Pennings @pleunipennings.bsky.social · 17/07/2026
peppered moth question! Is this graph based on data? And if so, does anyone know the reference? Or another reference with such a figure including the increase and decrease of dark morphs? www.coursehero.com/tutors-probl... @wtf-r-species.bsky.social
graph that shows frequency of light morphs going down and then up while dark morphs go up and then down. x axis goes from 1800 - 2000.
253
Reposted by Pleuni Pennings
𝙽𝚊𝚜𝚑 𝙸𝚜 𝙷𝚎𝚛𝚎 𝙵𝚘𝚛 𝙸𝚝 @nashishereforit.bsky.social · 17/07/2026
This is how to speak to every single one of those sycophants.
1151210027659
Pleuni Pennings @pleunipennings.bsky.social · 16/07/2026
I’ve been reading the intriguing gonorrhea drug resistance literature the last few days. Lots of intriguing work: genomics, models, trials, all the stuff I like!
100
Reposted by Pleuni Pennings
SaschaJanssen 🎸 @saschajanssen.bsky.social · 14/07/2026
Hup Annemarie! Ze roostert weer eens genadeloos de betweterige meningenmannetjes. 🔥 En neemt geen blad voor de mond als het op Dukkie aankomt. 😂
53987276
Reposted by Pleuni Pennings
Maureen Barr @barrlab.bsky.social · 11/07/2026
Posted my comments opposing OMBs proposed rule. It was so easy, using this great letter writing tool of @faseborg.bsky.social www.faseb.org/science-poli... Did you submit yours yet? The deadline is soon - July 13. This is essential to save science and research in the US.
I write in my personal capacity as a research-active faculty member, not on behalf of my institution. I am a distinguished professor at a leading state R1 university. I am also a Senior Principal Investigator whose research laboratory is NIH. I submit these comments in strong opposition to OMB's proposed rule revising 2 C.F.R. Part 200 (Docket OMB-2026-0034). I am requesting that OMB withdraw this rule entirely because of the devasting consequences it will have on biomedical research, human health, the economy, and the nation.

The proposed pre-issuance review requirement (§ 200.205) eliminates that independence by giving political appointees – who may have no experience or training in the biomedical research field - veto power over peer-reviewed funding decisions. As a Senior PI / Lab director whose research is supported by NIH, I am deeply concerned that the best science will not be funded, instead politicians will decide not based on merit and research quality, but rather ideology. Peer-review is critical for gold-standard science.

This proposed discretionary termination provision (§ 200.340) jeopardizes the future and well-being of the researchers in my laboratory, my department, my university, my state, and the United States.  My research program has been continuously funded by the NIH for over two decades. My laboratory is like a small business – with NIH funding, I employ eight full-time personnel. These scientists are at all stages of their careers – newly minted bachelors who are working as research technicians or graduate students; postdoctoral researchers who are completing additional training in order to go onto careers in academia, biotech, industry, governments; senior scientists who have devoted their entire careers to biomedical research and training the next generation of scientists, physicians, dentists, teachers, etc. 

The proposed international collaboration restrictions (§§ 200.202(e), 200.220) will isolate US scientists and lead to the demise…
36926
Reposted by Pleuni Pennings
Adam Serwer @adamserwer.bsky.social · 06/07/2026
Look if you think it’s fine for Trump to corruptly get a red card revoked (or “suspended”) bc FIFA is already corrupt, maybe you understand the MAGA mindset better than you think. “All politicians are corrupt so it’s ok for Trump to be corrupt” is a very common maga rationalization
13457111206
Pleuni Pennings @pleunipennings.bsky.social · 05/07/2026
The train ride back to Montpellier from Copenhagen is taking a long time but boredom is good for creativity. #smbe2026 #noflysmbe #flipaclip
1173
Pleuni Pennings @pleunipennings.bsky.social · 04/07/2026
Lees dit in de VK en helemaal mee eens! Ik hou van treinen maar kan anderen echt niet overtuigen als het onbetrouwbaar blijft. Opinie: Overtuigen om te reizen met de trein lukt niet met alleen klimaatdoelen www.volkskrant.nl/columns-opin...
volkskrant.nl
Opinie: Overtuigen om te reizen met de trein lukt niet met alleen klimaatdoelen
De trein is duurzamer en op papier een uitstekend alternatief voor het vliegtuig. Maar dan moet de reis niet alleen duurzaam zijn; ze moet ook betrouwbaar zijn.
100
Pleuni Pennings @pleunipennings.bsky.social · 01/07/2026
I have lots of handouts left - it's really a chapter of the book I'm writing - let me know if you'd like one. #smbe2026
0112
Reposted by Pleuni Pennings
Congresswoman Pramila Jayapal @jayapal.house.gov · 30/06/2026
We are never going to stop fighting for trans women and girls.
720135
Pleuni Pennings @pleunipennings.bsky.social · 30/06/2026
"there are traces of eugenics in our data, policy, healthcare" To change things @jazlynmooney.bsky.social teaches eugenics to students.
Monitor with slide about eugenics class at @usc and Jazlyn Mooney speaking
051
Pleuni Pennings @pleunipennings.bsky.social · 30/06/2026
Lots of people listening to @jazlynmooney.bsky.social talk about eugenics and science - the room is filled to capacity
Overflow room for Jazlyn Mooney talk , people  standing , with Dr Mooney shown speaking on monitor
091
Pleuni Pennings @pleunipennings.bsky.social · 30/06/2026
Impressive talk by Rori Rohlfs without her slides after a rare technical issue here at #smbe2026
Rori Rohlfs at the podium without her slides
0102
Pleuni Pennings @pleunipennings.bsky.social · 30/06/2026
If you're at #smbe2026 and you have an interest in drug resistance, pop gen or story telling in science, come check out my poster today! It's upstairs in Arkaden 6.
Short haired white woman (pleuni pennings) in black t shirt in front of poster with text and drawings.
0123
Pleuni Pennings @pleunipennings.bsky.social · 28/06/2026
I also just took a nightjet, from Basel to Hamburg. I liked it & my kid (12) too.
120
Reposted by Pleuni Pennings
Nadia Aubin-Horth @naubinhorth.bsky.social · 22/06/2026
I prepared my profile on the #smbe2026 scientific meeting app and I’m disappointed that you can link to your X/hell site profile but not Bluesky. I left the nazi site years ago and I wish it was not promoted and legitimized by scientific societies like @official-smbe.bsky.social
082
Reposted by Pleuni Pennings
Theoretical Ecology and Evolution (THEE) Group @thee-bank-lab.bsky.social · 25/06/2026
Bacteria that evolve antibiotic resistance epigenetically in cows 🐮?!!? If you're at #SMBE2026 , listen to group member Adamandia (Mado) Kapopoulou's ✨flash talk ✨ at 14:20 on Tue (30th) in Session 3 (Lumbye room).
162
Pleuni Pennings @pleunipennings.bsky.social · 26/06/2026
Poster ready and booklets printed. Come find me if you'd like to have one. Now I just need to pack my bag for #Smbe2026 Catching the train tomorrow #noflysmbe
Booklets with printed text and hand drawn images
0101
Reposted by Pleuni Pennings
Marc Robinson-Rechavi @marcrr.bsky.social · 02/04/2026
Are you going to #SMBE2026 Copenhagen by train, or are you hesitating? Let's share experiences and give ideas to those who think to fly from Western or Central Europe with the hashtag #NoFlySMBE. If you're coming from 🇨🇭, there are night trains from Zürich or Basel to Hamburg. ✅🚆 ❌✈️
157
Pleuni Pennings @pleunipennings.bsky.social · 23/06/2026
Working on my poster for #SMBE2026
Image of printed out poster lying on a desk with scissors next to it. Poster has images and text.
170
Reposted by Pleuni Pennings
Groen Pensioen @groenpensioen.bsky.social · 23/06/2026
Nederlandse pensioenfondsen blijven investeren in klimaatchaos: bouwen hun fossiele investeringen in slakkentempo af, terwijl die van Amerikaanse vermogensbeheerders als BlackRock enorm blijven. BlackRock beheert voor meer dan 7 miljoen NLders de pensioenen. www.groen-pensioen.nl/nieuws/pensi...
De hierboven genoemde cijfers zijn afkomstig uit het nieuwe rapport Investing in Climate Chaos 2026, gepubliceerd door Urgewald en 25 partner-NGO’s. Op de website https://investinginclimatechaos.org is te zien welke vermogensbeheerders, pensioenfondsen, staats- en overige investeringsfondsen, verzekeraars en hedge funds nog steeds beleggen in de kolen- olie- en gasbedrijven die de klimaatcrisis veroorzaken. Investing in Climate Chaos laat zien dat institutionele investeerders op dit moment wereldwijd meer dan $6.5 biljoen aan aandelen en obligaties van fossiele bedrijven bezitten. 

Investing in Climate Chaos omvat de investeringen in aandelen en obligaties van meer dan 8.400 institutionele investeerders in de fossiele bedrijven die zijn opgenomen in Urgewald’s toonaangevende databanken: de Global Coal Exit List (GCEL), de Metallurgical Coal Exit List (MCEL) en de Global Oil & Gas Exit List (GOGEL). Deze drie databanken worden al gebruikt door honderden financiële instellingen wereldwijd om in te zien welke bedrijven van fossiele brandstoffen weg bewegen en welke daar juist extra op inzetten.

De hierboven genoemde cijfers zijn afkomstig uit het nieuwe rapport Investing in Climate Chaos 2026, gepubliceerd door Urgewald en 25 partner-NGO’s. Op de website https://investinginclimatechaos.org is te zien welke vermogensbeheerders, pensioenfondsen, staats- en overige investeringsfondsen, verzekeraars en hedge funds nog steeds beleggen in de kolen- olie- en gasbedrijven die de klimaatcrisis veroorzaken. Investing in Climate Chaos laat zien dat institutionele investeerders op dit moment wereldwijd meer dan $6.5 biljoen aan aandelen en obligaties van fossiele bedrijven bezitten. 

Investing in Climate Chaos omvat de investeringen in aandelen en obligaties van meer dan 8.400 institutionele investeerders in de fossiele bedrijven die zijn opgenomen in Urgewald’s toonaangevende databanken: de Global Coal Exit List (GCEL), de Metallurgical Coal Exit List (MCEL) en de Global Oil & Gas Exit List (GOGEL). Deze drie databanken worden al gebruikt door honderden financiële instellingen wereldwijd om in te zien welke bedrijven van fossiele brandstoffen weg bewegen en welke daar juist extra op inzetten.

De hierboven genoemde cijfers zijn afkomstig uit het nieuwe rapport Investing in Climate Chaos 2026, gepubliceerd door Urgewald en 25 partner-NGO’s. Op de website https://investinginclimatechaos.org is te zien welke vermogensbeheerders, pensioenfondsen, staats- en overige investeringsfondsen, verzekeraars en hedge funds nog steeds beleggen in de kolen- olie- en gasbedrijven die de klimaatcrisis veroorzaken. Investing in Climate Chaos laat zien dat institutionele investeerders op dit moment wereldwijd meer dan $6.5 biljoen aan aandelen en obligaties van fossiele bedrijven bezitten. 

Investing in Climate Chaos omvat de investeringen in aandelen en obligaties van meer dan 8.400 institutionele investeerders in de fossiele bedrijven die zijn opgenomen in Urgewald’s toonaangevende databanken: de Global Coal Exit List (GCEL), de Metallurgical Coal Exit List (MCEL) en de Global Oil & Gas Exit List (GOGEL). Deze drie databanken worden al gebruikt door honderden financiële instellingen wereldwijd om in te zien welke bedrijven van fossiele brandstoffen weg bewegen en welke daar juist extra op inzetten.
11719
Pleuni Pennings @pleunipennings.bsky.social · 09/06/2026
Imagine you had six years of data and every year resistance levels go up ... What would you think will happen in the future? (here showing data from quinolone resistance in E coli in Hungary from the supplement of this paper by @sonjalehtinen.bsky.social et al journals.plos.org/plospathogen...
hand-drawn graph showing increasing frequency of resistance 6 years  in a row, with two blue arrows, one that continues to increase and one that plateaus. data from quinolone resistance in E coli in Hungary.
1208
Pleuni Pennings @pleunipennings.bsky.social · 01/06/2026
I enjoyed watching Ronny Chieng's speech for one of the Harvard graduation events. www.youtube.com/live/ORq_Hi5...
youtube.com
Ronny Chieng Address | Harvard Class Day 2026
YouTube video by Harvard University
0120
Pleuni Pennings @pleunipennings.bsky.social · 21/05/2026
Wow this is an amazing resource for those who are considering applying for PhD programs in ecology and evolution and related fields in the US.
040