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Theoretical Ecology and Evolution (THEE) Group

@thee-bank-lab.bsky.social
86 followers 66 following 33 posts

Official account for Claudia Bank's research group at the University of Bern. Posts about research, papers, and news regarding ecology and evolution. Account managed by @timothyfuqua@bsky.social Lab website: banklab.github.io/people

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Reposted by Theoretical Ecology and Evolution (THEE) Group
Timothy Fuqua @timothyfuqua.bsky.social · 06/10/2026
Let's talk about enhancer evolution at my poster (no. 61), discuss the automated yeast evolution we're doing in @thee-bank-lab.bsky.social (video below), or chat about hosting opportunities for the ERC StG next cycle ;) #EMBOEvoEco
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Theoretical Ecology and Evolution (THEE) Group @thee-bank-lab.bsky.social · 06/10/2026
@cbank.bsky.social and @timothyfuqua.bsky.social will be attending #EMBOEvoEco this week. Tim is giving a flash talk for his poster (no. 61) on Wed at 13:50 about using AI models to predict enhancer evolution, and Claudia is presenting on Wed about eco-evo fitness landscapes at 16:20. Come say hi!
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Theoretical Ecology and Evolution (THEE) Group @thee-bank-lab.bsky.social · 18/09/2026
(1/4) Join us in congratulating our group's PI Claudia (@cbank.bsky.social) on earning a Certificate of Advanced Studies (CAS) in Higher Education Teaching from the University of Bern (@unibe.ch)!
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Reposted by Theoretical Ecology and Evolution (THEE) Group
Timothy Fuqua @timothyfuqua.bsky.social · 19/08/2026
@vakirlis.bsky.social and I are proposing a new term in the de-novo genes / molecular evolution cinematic universe. The term is: "Emergence Bias" and our perspective piece describing it was published in @genomebiolevol.bsky.social today! So, what is an emergence bias? (1/7)
academic.oup.com
Emergence Biases in Molecular Evolution
Abstract. Biases in molecular evolution can significantly influence evolutionary trajectories. They have been described in a variety of contexts, such as d
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Theoretical Ecology and Evolution (THEE) Group @thee-bank-lab.bsky.social · 10/08/2026
Huge congrats to @ayalopjulio.bsky.social on his work 👏 We welcome any feedback and positive criticisms (not too much 😉) at this time.
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Theoretical Ecology and Evolution (THEE) Group @thee-bank-lab.bsky.social · 14/07/2026
The @cbank.bsky.social lab is going 🚄 to #MMEE2026 in Cork next week! @ayalopjulio.bsky.social will present Thursday afternoon on hybrid incompatibilities, and @lorhab.bsky.social will present Wednesday afternoon on the repeatability of adaptation (1/3)
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Reposted by Theoretical Ecology and Evolution (THEE) Group
Charles Mullon @charlesmullon.bsky.social · 26/06/2026
Last chance to apply !
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Theoretical Ecology and Evolution (THEE) Group @thee-bank-lab.bsky.social · 25/06/2026
Bacteria that evolve antibiotic resistance epigenetically in cows 🐮?!!? If you're at #SMBE2026 , listen to group member Adamandia (Mado) Kapopoulou's ✨flash talk ✨ at 14:20 on Tue (30th) in Session 3 (Lumbye room).
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Theoretical Ecology and Evolution (THEE) Group @thee-bank-lab.bsky.social · 25/06/2026
PhD candidate @wachalak.bsky.social from our department will be presenting at #SMBE2026 in Session 15: "Detecting selection and local adaptation on (im)possible systems". Listen to her ✨flash talk✨ "Detecting local adaptation within chromosomal inversions" on Wed the 1st of July at 11:10.
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Theoretical Ecology and Evolution (THEE) Group @thee-bank-lab.bsky.social · 23/06/2026
Congrats to @zacharybailey.bsky.social on his new preprint which show that phages can stabilize coexistence between competing bacteria cultures🧫🦠, but temperature fluctuations 🌡️ (like this heat wave 🥵 we are currently experiencing in Europe 🌍) can weaken these interactions!
biorxiv.org
Constant and variable warming differentially shape bacterial coexistence through phage-mediated interactions
Frequency-dependent predation helps maintain bacterial diversity, but its stabilizing role may be compromised under climate warming. Whereas theory suggests that warming can weaken predator-prey inter...
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Theoretical Ecology and Evolution (THEE) Group @thee-bank-lab.bsky.social · 10/06/2026
The University of Bern's features the "Treasure Chest project", which uses real-world scenarios to teach stats to bio students. Our collaborator Stephan Peischl @spei.bsky.social connects genetics to epidemiology, bringing statistics to life! Article (in DE) in the link below:
uniaktuell.unibe.ch
Die Schatztruhe macht Statistik lebendig
Das Programm «IMPULS: LEHRE» fördert innovative Lehrprojekte an der Uni Bern. Eines davon ist die «Schatztruhe».
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Theoretical Ecology and Evolution (THEE) Group @thee-bank-lab.bsky.social · 02/06/2026
Happy Pride month PhD candidate @lorhab.bsky.social will also be speaking at the next "Astronomy on Tap Bern" on Wed, the 10th of June at Stellwerk. Scan the QR-code in the image if you want to participate!
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Theoretical Ecology and Evolution (THEE) Group @thee-bank-lab.bsky.social · 02/06/2026
Congrats to current postdoc @timothyfuqua.bsky.social who recently published the work from his former-postdoc position working on promoter emergence in random vs genomic DNA.
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Theoretical Ecology and Evolution (THEE) Group @thee-bank-lab.bsky.social · 02/06/2026
A bit late, but @msrivastava95.bsky.social , @cbank.bsky.social , Suman Das, and Joachim Krug recently released a manuscript on arXiv titled: "Evolution as fitness landscape navigation: Concepts, Measures, and Emerging Questions". Check out their work here! arxiv.org/abs/2604.17036
arxiv.org
Evolution as fitness landscape navigation: Concepts, Measures, and Emerging Questions
Fitness landscapes are mappings between genotypes, phenotypes, and fitness that shape evolution. In recent years, empirical work and theoretical models have greatly advanced our understanding of how p...
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Theoretical Ecology and Evolution (THEE) Group @thee-bank-lab.bsky.social · 02/06/2026
Happy pride month 🏳️‍🌈 PhD candidate, @lorhab.bsky.social from the group was recently on the radio with Radio Bern (RABE) to talk about the network Queer UniBE, an LGBTQ+ organization for staff at the University of Bern (session starts ~19 minutes, German only): rabe.ch/beitrag/20-0... (post 1/2)
rabe.ch
«Wir Iraner*innen befinden uns hierzulande in der Schwebe»
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Theoretical Ecology and Evolution (THEE) Group @thee-bank-lab.bsky.social · 07/04/2026
We are happy to present the latest preprint from our group led by Ph.D. candidate @lorhab.bsky.social! This piece explores the epistatic tradeoffs within eco-evo fitness landscapes (Give her a follow and wish her luck finishing her thesis!). Any feedback and constructive criticism is appreciated.
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Reposted by Theoretical Ecology and Evolution (THEE) Group
Noa Ottilie Borst @ottilie.bsky.social · 18/03/2026
Excited to share my first preprint from my PhD w/ @justinmcrocker.bsky.social. We show that cell type-specific regulatory dominance promotes robustness and evolutionary innovation through interallelic transcriptional hubs, potentially expanding the mutational paths available to diploids. (1/18)
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Reposted by Theoretical Ecology and Evolution (THEE) Group
Hermina Ghenu (they/them) @a-hermina-ghenu.bsky.social · 16/01/2026
Can interactive web apps help biology students become better modellers? peischllab.github.io/MEEW.html We're running an ethics-approved, pre-registered study thanks to funding from the University of Bern. Are you lecturing in the Spring? Contact me to receive the survey link!
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Theoretical Ecology and Evolution (THEE) Group @thee-bank-lab.bsky.social · 22/01/2026
🧬 Our 2025 review is here! A (very belated) Happy New Year from the THEE group! From transcription factor evolution to microbiomes, epistasis, biodiversity, and antimicrobial resistance — here’s a thread highlighting our group’s contributions to research in 2025 👇
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