Michael Manhart @michaelmanhart.bsky.social · 25/09/2026Two interesting Ph.D. student opportunities in microbial ecology, evolution, and systems biology, in labs I think very highly of: Tobias Bollenbach, U. Cologne (bpsb.uni-koeln.de/open-positions) Andrew Letten, U. Queensland (evoldir.net/brian/evoldi...) 0128
Michael Manhart @michaelmanhart.bsky.social · 26/02/2026Glad to have been part of this new paper, showing how the gut microbiomes of people with a wide range of diseases shift from being dominated by competitive interactions between microbes to being dominated by cross-feeding interactions (1/2) www.science.org/doi/10.1126/...science.orgImbalance in gut microbial interactions as a marker of health and diseaseImbalances in the human gut microbiome, or dysbioses, are associated with multiple diseases but remain poorly understood. Existing biomarkers of dysbiosis fail to capture the ecological mechanisms tha... 170
Michael Manhart @michaelmanhart.bsky.social · 14/10/2025My department (Rutgers Med School Biochem & Mol Bio) is hiring a Tenure-Track Assistant/Associate Professor in Evolutionary Medicine. Topic is interpreted broadly, but candidates should integrate evolutionary theory with molecular mechanisms. Please share! jobs.rutgers.edu/postings/261...jobs.rutgers.eduAssistant or Associate Professor Tenure TrackThe Department of Biochemistry and Molecular Biology at the Robert Wood Johnson Medical School (RWJMS), Rutgers Health, seeks outstanding candidates for a tenure-track Assistant or Associate Professor... 012
Michael Manhart @michaelmanhart.bsky.social · 30/09/2025One more day to apply to our lab's Ph.D. position for fall 2026 bsky.app/profile/mich... 064
Michael Manhart @michaelmanhart.bsky.social · 25/09/2025One more week to apply for a Ph.D. in our lab for fall 2026 bsky.app/profile/mich... 010
Reposted by Michael ManhartSeppeKuehnLab @seppekuehnlab.bsky.social · 04/09/2025Center for Living Systems -- seeking strong post docs at the interface of physics and biology. Consider applying by Oct. 13! docs.google.com/forms/d/e/1F...docs.google.com 01213
Michael Manhart @michaelmanhart.bsky.social · 02/09/2025I am recruiting a Ph.D. student in microbial ecology, evolution, and systems biology for fall 2026. Please share! Details: qevomicrolab.org/Documents/Gr... Apply by October 1 here: forms.gle/38pPS1Ky84HB... 12541
Reposted by Michael ManhartNoelle Held @proteocean.bsky.social · 05/06/2025I am hiring a research/technical specialist/manager to help us make the most out of new LC-MS instrumentation at USC! Please share the word and write me for more details. usc.wd5.myworkdayjobs.com/en-US/Extern...usc.wd5.myworkdayjobs.comAssistant Director of the Center for Proteomics Discovery (Research Program Administrator)The USC Dana and David Dornsife College of Letters, Arts and Sciences is seeking a Research Program Administrator (non-Clinical) and Assistant Director of the USC Center for Proteomics Discovery. This... 048
Michael Manhart @michaelmanhart.bsky.social · 21/02/2025I've usually followed the principle of trying to establish the set of figures before writing text while working on papers. But I just realized this doesn't seem to work for me when writing proposals: I have to organize the ideas with text first before deciding what figures I need. 130
Michael Manhart @michaelmanhart.bsky.social · 18/02/2025Opening for a Ph.D. student in the group of Tobias Bollenbach at U. Cologne studying biological physics and systems biology. Outstanding group and scientific environment in my opinion: jobportal.uni-koeln.de/ausschreibun...jobportal.uni-koeln.de 000
Michael Manhart @michaelmanhart.bsky.social · 15/02/2025I really like this essay in the Inquirer on cutting the NIH. It is personal, and it is directed at those who might disagree with the author. I hope some of them read it. www.inquirer.com/opinion/comm...inquirer.comCutting NIH funding puts my life on the line — and maybe yours as well | OpinionPrivate investment in pharmaceutical research can't replace the NIH. Both public investment and the private sector are needed to be world leaders in health care, writes Michelle Francl-Donnay. 121
Reposted by Michael ManhartJoanna Masel @joannamasel.bsky.social · 04/11/2024I'm hiring a postdoc! To use substitution models to understand protein evolution and/or improve phylogenetic methods. evol.mcmaster.ca/brian/evoldi...evol.mcmaster.cahttps://evol.mcmaster.ca/brian/evoldir/PostDocs//UArizona.AminoAcidSubstitutionModelsPostdoc position: amino acid substitution models A postdoc position is available with PI Joanna Masel (https://www.masellab.org/) at the University of Arizona in Tucson. Tucson is a vibrant city of n... 01327
Reposted by Michael ManhartGina Lewin @ginalewin.bsky.social · 25/10/2024Hi BlueSky friends! Postdoc(s) available in my lab! Multiple projects on how bacterial genomic and functional diversity impacts microbial interactions & disease. 🦠🧫 See www.thelewinlab.com/join-us/post... for more information. Please RT & share. #Postdoc #Microbiology #OralMicro #VaginalMicro 12441
Reposted by Michael ManhartNittay Meroz @nittaym.bsky.social · 24/10/2024Great to see our paper published! We show that the presence of another species doesn't necessarily influence evolution. @jfriedman.bsky.social authors.elsevier.com/c/1jxht8YyDf... Thanks to the anonymous reviewers for their constructive comments!authors.elsevier.com 074
Reposted by Michael ManhartJake McKinlay @jakemckinlay.bsky.social · 31/08/2024We are hiring at all prof ranks in synthetic biology, loosely defined. Even if you don't consider synbio to be your main focus but maybe you develop genetic tools, have some applied research in the mix, work with defined communities, etc, you should apply. jobs.sciencecareers.org/job/660751/m...jobs.sciencecareers.orgMultiple, Tenured/Tenure-Track Faculty Positions in Synthetic Biology - Bloomington, IndianaInvite applications for multiple tenure/tenure-track positions at all ranks to begin in the Fall of 2025. 049
Reposted by Michael ManhartJustus Wilhelm Fink @justuswfink.bsky.social · 01/10/2024Why are there so many fitness metrics in microbial ecology? I was confused as I started the PhD - and with @michaelmanhart.bsky.social , I developed a framework that unifies existing statistics of relative fitness and shows how they all derive from a few basic principles. Preprint is up! 1/ndoi.orgQuantifying microbial fitness in high-throughput experimentsFew concepts are as central to evolution as is fitness, and yet the quantification of fitness is often ambiguous. In particular, high-throughput experiments to measure mutant fitness in microbes are i... 1147
Reposted by Michael ManhartSeppeKuehnLab @seppekuehnlab.bsky.social · 22/09/2024Post docs in theory/math/bio join us! www.nitmb.org/research/nit...nitmb.orgNITMB Fellows Program | NITMBNITMB sponsors a NITMB Fellows Program, in which we support independent Postdoctoral Fellows for a three year term. NITMB Fellows develop and conduct independent research programs aligned with the Ins... 032
Reposted by Michael ManhartMeike Wortel @meikewortel.bsky.social · 24/09/2024One week left to apply! Interested in computational models to study the predictability of evolution in Candida communities? Apply through the link below! 011
Reposted by Michael ManhartCameron Thrash @jcamthrash.bsky.social · 03/09/2024‘Wild Type’ www.microbiologyresearch.org/content/jour... #jcampubsmicrobiologyresearch.org‘Wild Type’In this opinion piece, we consider the meaning of the term ‘wild type’ in the context of microbiology. This is especially pertinent in the post-genomic era, where we have a greater awareness of specie... 032
Reposted by Michael ManhartMeike Wortel @meikewortel.bsky.social · 03/09/2024I'm looking for a postdoctoral researcher for a 3-year position on the predictability of evolution using computational modelling: vacatures.uva.nl/UvA/job/Post... Please share!vacatures.uva.nlPostdoctoral Researcher in Predicting Evolution with Multiscale ModelsPostdoctoral Researcher in Predicting Evolution with Multiscale Models 01424
Reposted by Michael ManhartIan Oldenburg @ianoldenburg.bsky.social · 13/08/2024Not sure if we've hit critical mass here on bsky yet, but the lab is hiring! We've gotten some good news grants recently, and now have some funded projects that are looking for people to champion them. All projects use Holographic Optogenetics to study motor systems. oldenburglab.com/positions/oldenburglab.comPositions, Oldenburg LabJoin the lab We are looking for curious, motivated, and talented people from all different backgrounds to join our team at all levels. 0810
Michael Manhart @michaelmanhart.bsky.social · 31/07/2024Second authorship is the highest variance authorship there is 020
Reposted by Michael ManhartJonathan Friedman @jfriedman.bsky.social · 30/07/2024Our article on microbial interactions is out! We discuss what are microbial interactions, what are they useful for, and how to quantify them. For more, see lead author @nittaym.bsky.social 's 🧵: x.com/NittayMeroz/... or read the full article here (free access until Sep 1st): shorturl.at/ONiNS 02115
Reposted by Michael ManhartMelanie Mitchell @melaniemitchell.bsky.social · 30/07/2024The Santa Fe Institute's Postdoctoral Fellowships offer early-career scientists unparalleled intellectual freedom to pursue key insights about the complex systems that matter most for science and society. For more information go to apply-sfi.smapply.org/prog/complex...apply-sfi.smapply.orgComplexity Postdoctoral Fellowship - Santa Fe Institute 23939
Reposted by Michael ManhartTami Lieberman @contaminatedsci.bsky.social · 11/07/2024We are on the look out for postdocs to join the Lieberman Lab at MIT. Areas include: -Connecting bacterial warfare to strain dynamics in vivo -Evolution and transmission of microbes in humans -Revisiting role of microbes in acne vulgaris Take a look at our recent preprints and reach out! 05439
Reposted by Michael ManhartSara Mitri @saramitri.bsky.social · 11/07/2024We're looking for an enthusiastic experimentalist PhD student to join our interdisciplinary group interested in the ecology & evolution of microbial communities unil.ch/mitrilab. Apply tinyurl.com/mu5swnk8 before Aug 31! Bonus: Lausanne is a beautiful place to live! 21030
Reposted by Michael ManhartMeike Wortel @meikewortel.bsky.social · 23/12/2023I'm happy 😀 to announce I have a PhD position on the mathematical 🧮 modelling 💻 of microbial 🦠 evolution! I'm looking forward to working with an enthousiastic candidate on this project, please contact me with any questions! #JobAlert Please retweet! vacatures.uva.nl/UvA/job/PhD-... 12433
Reposted by Michael ManhartDr. Carly Kenkel @drcarl.bsky.social · 11/06/2024Back by popular demand - the list of Ecology/Evolution/Marine Bio Labs recruiting grad students for Fall 2025! PIs - Enter your position info here: forms.gle/adBbhEBqYUg5... Prospective students (and PIs not recruiting) - share the composite list: docs.google.com/spreadsheets... Please share!forms.gleEcology/Evolution/Marine Biology labs recruiting for Fall 2025Please complete this form if you are a PI recruiting graduate students for a Fall 2025 start. If you are NOT recruiting, feel free to share the response sheet with prospective students looking for lab... 23943
Reposted by Michael ManhartMeike Wortel @meikewortel.bsky.social · 16/05/2024I am looking for a PhD candidate to work on computational metabolic modelling of infant microbiomes with me @SILS_UvA! Close collaboration with experimental research and cohort studies in nwo-metahealth.nl Info and apply (before June 1st!): vacatures.uva.nl/UvA/job/PhD-...nwo-metahealth.nlHealthy weight and healthy teeth for children - MetaHealthMetaHealth is a large research consortium with fundamental and applied research partners both from public and private organizations. The program ... 114
Michael Manhart @michaelmanhart.bsky.social · 30/04/2024Last day to apply to our lab's theoretical biophysics/computational biology postdoc on predicting evolution in microbial communities! Details: qevomicrolab.org/wp-content/u... Apply here: forms.gle/hMNgrh3Ja5dP...qevomicrolab.org 001
Reposted by Michael ManhartRob Noble @robjohnnoble.bsky.social · 30/04/2024Arizona State University has created a Presidential Postdoctoral Fellowship position to apply comparative genomics to evolutionary medicine problems, particularly cancer. Successful candidates will transition to a tenure-track position at ASU. Applications due May 17th. apply.interfolio.com/144623apply.interfolio.com Apply - Interfolio {{$ctrl.$state.data.pageTitle}} - Apply - Interfolio 014
Reposted by Michael ManhartGregor Kalinkat @gkalinkat.bsky.social · 29/04/2024'The state of academic publishing in 3 graphs, 6 trends, and 4 thoughts' by Brian McGill at Dynamic Ecology 🧪 (not necessarily agreeing with 100% of it but still worth a read) dynamicecology.wordpress.com/2024/04/29/t... #openaccess #academicpublishingdynamicecology.wordpress.comThe state of academic publishing in 3 graphs, 6 trends, and 4 thoughtsEleven years ago I shared a fairly heavily researched summary of the state of academic publishing. I mostly argued that OA (aka author pays) was a red herring and that we should really pay attention t... 12123
Reposted by Michael ManhartFlorian Altermatt @florianaltermatt.bsky.social · 29/04/2024#Cluster #hire @Eawag in Zurich/Switzerland!🇨🇭 4 Tenure Track Group Leader Positions on Climate Change Adaptation w/ specific focus on alpine #biodiversity & other aspects of #climate #change adaption in #aquatic systems. 🔬🧬🐟🦠🌊🐡🏔️ Apply here & share widely! apply.refline.ch/673277/1169/... 039
Michael Manhart @michaelmanhart.bsky.social · 24/04/2024One more week to apply for our lab's biophysics/comp bio postdoc position on predicting evolution in microbial communities! A truly interdisciplinary opportunity to collaborate with @meikewortel.bsky.social and Daniel Charlebois on an HFSP-funded project. Please share if you can! 001
Reposted by Michael ManhartArlin Stoltzfus @evolarlin.bsky.social · 16/04/2024I’m starting a special interest group with monthly seminars + discussion focused on the role of mutation in evolution covering #evobio #popgen #histsci #philsci Upcoming speakers: @PeterALind, @DeepaAgashe, Grey Monroe, Rose Novick, Alex Klug To join, email <myfirstname>@umd.edu Please repost 01518
Reposted by Michael ManhartNandita Garud @nanditagarud.bsky.social · 16/04/2024The UCLA Goodman-Luskin Endowed Postdoctoral Fellowship in Microbiome Research ($100K in salary + supplies) deadline is June 1. Get in touch if you would like to write a proposal together! And, get in touch even if your timeline is different - I am looking for a postdoc! 022
Michael Manhart @michaelmanhart.bsky.social · 04/04/2024I am recruiting a postdoc in statistical physics, computational biology, or a related field to study the predictability of evolution in microbial communities. Please share! Details: qevomicrolab.org/wp-content/u... Apply by May 1 here: forms.gle/hMNgrh3Ja5dP... 0514
Michael Manhart @michaelmanhart.bsky.social · 04/04/2024Thanks to the Human Frontier Science Program, I'm excited to start a new collaboration with @meikewortel.bsky.social and Daniel Charlebois on the predictability of evolution across scales of microbial communities! I will post more soon about recruiting a new postdoc for this project 020
Reposted by Michael ManhartPaul Carini @uncultured.carinilab.com · 30/03/2024One of the hardest parts of being a PI is knowing when to step in to help a student. Too early and you curtail important growth. Too late and resentment and frustration creep in. It's a knife edge. 0195
Michael Manhart @michaelmanhart.bsky.social · 28/03/2024Has anyone used automation instruments from Molecular Devices (mainly robotic arm for plate handling)? 100
Reposted by Michael ManhartSergey Kryazhimskiy @skryazhi.bsky.social · 15/03/2024It's official. Thanks to the MIRA grant, my lab gets to live to fight another day (or, more accurately, five years :). We are now actively recruiting. Please spread the word and reach out if you are interested doing a postdoc with me. One position is available jointly with Terry Hwa's lab. Exciting! 2329
Michael Manhart @michaelmanhart.bsky.social · 14/03/2024Having posted about the review @proteocean.bsky.social and I wrote about colimitation in microbes, I also want to share the research preprint on this that we recently wrote as well, along with @krishnaaswin77.bsky.social, Donat Crippa, and Anastasia Dragan. doi.org/10.1101/2023... 1/4doi.orgNutrient colimitation is a quantitative, dynamic property of microbial populationsbioRxiv - the preprint server for biology, operated by Cold Spring Harbor Laboratory, a research and educational institution 142
Michael Manhart @michaelmanhart.bsky.social · 14/03/2024Interesting job opportunity to study computational evolutionary biology outside of an academic setting jobs.lever.co/arcadiascien... 000
Michael Manhart @michaelmanhart.bsky.social · 05/03/2024Microbes need many different resources, but do some of these resources simultaneously COLIMIT growth? @proteocean.bsky.social and I provide a new review of this concept, a summary of evidence that colimitation occurs in natural environments, and its causes/consequences. doi.org/10.32942/X2S... 1/6doi.orgAre microbes colimited by multiple resources? 162
Reposted by Michael ManhartMatthias C. Rillig @mrillig.bsky.social · 22/02/2024In my latest newsletter I write about the obsession with methods in microbial ecology, and I share my admiration of simple, but elegant experimental approaches. 🧪🦠 What do you think? open.substack.com/pub/matthias...open.substack.comObsession with methods in microbial ecologyStriving towards bare minimum technique awesomeness 2157
Reposted by Michael ManhartMarco Mauri @marcomauri.bsky.social · 19/01/2024The Population Dynamics Virtual Seminars has a new home sites.google.com/view/popdyn/ Check the webpage and get informed on the 2024 speaker's list! 01719
Reposted by Michael ManhartS Otto @sarperotto.bsky.social · 19/01/2024Are you a theoretician in ecology/evolution/systematics & related fields? Do you hope to become one? Wondering where there is a good community to share tips, learn new tricks, & hear about modelling discoveries? Check out the Society for Modeling & Theory in Population Biology (SMTPB)! smtpb.org 25345
Reposted by Michael ManhartPaul Carini @uncultured.carinilab.com · 15/12/2023#microsky Are there bacterial habitats that go through unpredictable swings of nutrient availability spanning the near absence of nutrients to being completely flush with nutrients? 647
Reposted by Michael ManhartSara Mitri @saramitri.bsky.social · 05/12/2023Our department is recruiting a tenure-track Assistant Professor on microbial interactions linked to the NCCR Microbiomes nccr-microbiomes.ch Don't miss this opportunity to join a friendly, dynamic department in a city with hard-to-beat quality of life. Apply tinyurl.com/4k2mevax by Jan 31! 16664
Reposted by Michael ManhartMeike Wortel @meikewortel.bsky.social · 12/12/2023Postdoctoral fellowships available for interdisciplinary research related to emergence (FAEME): d-iep.org/emergencefello… (deadline Jan 31st) 031