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Kops Lab

@kopslab.bsky.social
162 followers 85 following 20 posts

Interested in all things chromosome segregation and aneuploidy | Director & PI at Hubrecht Institute

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Kops Lab @kopslab.bsky.social · 23/02/2026
As a cell biology lab, we acknowledge the decades-long impressive efforts to uncover evolutionary relationships using advanced phylogenomics methods. These approaches undergo continuous improvements that lead to adjustments of data interpretation, as is the case in every scientific field. (1/3)
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Max Raas @maxraas.bsky.social · 13/02/2026
Recently, a Hypothesis was posed in @jcellsci.bsky.social in which the root of eukaryotes was placed between kinetoplastids and all other eukaryotes. From this, it was implied that LECA did not have a kinetochore. We argue this is highly unlikely. A 🧵(1/12) Read our reply here: tinyurl.com/n87myhpr
tinyurl.com
The LECA had a conventional kinetochore and the kinetoplastid kinetochore is a derived feature – a critical evaluation of Akiyoshi, 2025
Summary:Akiyoshi, 2025 presented a hypothesis with implications for the early evolution of eukaryotes and eukaryotic cell division machinery. In this Correspondence, the authors conclude that this hyp...
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Kops Lab @kopslab.bsky.social · 01/12/2025
New preprint from our lab! Led by Emine Ali and @maxraas.bsky.social See the highlights below!
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Max Raas @maxraas.bsky.social · 01/12/2025
Our story on the kinetochore composition of the ciliate Tetrahymena thermophila is out now on bioRxiv! We find surprisingly many orthologs of conventional kinetochore components, but also components that have very different evolutionary origins. A 🧵 (1/11) Check it out here: tinyurl.com/4ectm9x4
tinyurl.com
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Kops Lab @kopslab.bsky.social · 04/11/2025
Ever wondered how chromosomal instability (CIN) influences tumorigenesis? And how does it contribute to shaping the tumor microenvironment? In our latest preprint, we used the CiMKi model to induce and monitor skin tumors across five levels of CIN tinyurl.com/52tuk88z Here's what we find (1/5):
tinyurl.com
Non-cell-autonomous mechanisms of tumor initiation and relapse by chromosomal instability
Chromosomal instability (CIN) is a hallmark of cancer, and a primary cause of genetic heterogeneity in tumors. Depending on the degree of CIN and the affected tissue, CIN can promote or suppress tumor...
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Hubrecht Institute @hubrechtinstitute.bsky.social · 26/09/2025
Ready to establish your own research group at the Hubrecht Institute for Molecular and Developmental Biology? We’re seeking a tenure-track group leader to develop an innovative research line within our vibrant scientific community. Learn more & apply! f.mtr.cool/jncxfqkuds
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Kops Lab @kopslab.bsky.social · 09/07/2025
Our new preprint is out! We revisit the associations between p53 status and cancer aneuploidy using TCGA data. Here’s a breakdown of our findings. Important work spearheaded by the talented PhD candidate Joana Marques. Check it out here: www.biorxiv.org/content/10.1... (1/8)🧵
biorxiv.org
Cancer type-specific association of p53 deficiency with aneuploidy and chromosome losses
Aneuploidy and mutations in the TP53 tumor suppressor gene are among the most frequent genetic alterations in cancer, and p53 inactivation is considered an important contributor to the emergence of cancer aneuploidy. It is unclear, however, if p53 protects against particular forms of copy number alterations and whether it does so universally across cancer types. By analyzing p53 status and various aneuploidy features in 31 cancer types in the TCGA database, we verify that on a pan-cancer level p53-deficient cancers tend to have a higher degree of aneuploidy. However, for many cancer types, the average degree of aneuploidy is similar in p53-proficient and -deficient samples, and a substantial degree of aneuploidy can accumulate with intact p53 in almost all cancer types. Neither arm-level nor whole chromosome aneuploidy but rather chromosome loss events distinguish p53-deficient from proficient cancers. p53 inactivation is therefore neither sufficient nor necessary for the emergence of cancer aneuploidy, but is associated with the degree of aneuploidy in a subset of cancer types and more universally with chromosome losses. Our findings underscore the poorly understood nature of aneuploidy emergence in cancer and shed new light on the role of p53 therein. ### Competing Interest Statement The authors have declared no competing interest. Dutch Cancer Society (KWF Kankerbestrijding) European Research Council, ERC-SyG 855158
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Kops Lab @kopslab.bsky.social · 08/07/2025
A few weeks ago, we said goodbye to long-term Kops lab member Emine Ali, our resident protistologist. We wish Emine all the best in her future career.
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Kops Lab @kopslab.bsky.social · 02/04/2025
Spending a few days in beautiful Heidelberg for the 5th EMBL partnership conference. Our Hubrecht institute is EMBL partner and it has been wonderful to see the exciting science of the other partner institutes! @embl.org @hubrechtinstitute.bsky.social
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Kops Lab @kopslab.bsky.social · 25/03/2025
An amazing inaugural Hubrecht Symposium on Developmental Biology, bringing the Dutch community together and getting inspired by amazing science! A big thank you to the speakers, the organizing committee and the many dedicated Hubrechters who made it happen.
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Iva Tolić @ivatolic.bsky.social · 10/03/2025
🚀Ever wondered if there's a universal rule of spindle scaling across eukaryotes? Turns out, there is! Our study reveals an evolutionarily conserved principle driven by a surprising factor: chromosome crowding. 🧵👇 shorturl.at/MmPNr
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Hubrecht Institute @hubrechtinstitute.bsky.social · 14/02/2025
How do cells measure time? Despite its fundamental role in development, the underlying mechanisms remain unclear. An NWO ENW-XL grant allows a research consortium from the Hubrecht Institute, AMOLF, TU Delft, and ENS Paris to study timing regulation in C. elegans. www.hubrecht.eu/how-do-cells...
Expression of the timing protein LIN-39 (green) in C. elegans
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Journal of Cell Science @jcellsci.bsky.social · 09/01/2025
Ana Almeida, Helder Rocha, Maximilian Raas, Geert Kops, Reto Gassmann, Helder Maiato @i3suporto.bsky.social, et al. dissect the relationship between kinetochore size & CENP-E dependence for chromosome alignment. journals.biologists.com/jcs/article/... journals.biologists.com/jcs/article/...

Phylogenetic profile of CENP-E across holocentric and monocentric taxa. (A–D) CENP-E conservation in (A) the phylum Nematoda, (B) the phylum Vertebrata, (C) the insect order Hemiptera and (D) the insect order Diptera. Lineages with an inferred CENP-E loss are highlighted with a coloured box. Holocentric lineages are indicated with ‘H’ and monocentric lineages with ‘M’, as well as with a graphic depiction of holocentric and monocentric chromosomes.
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