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Joana Verissimo Ferreira

@joanavferreira.bsky.social
90 followers 178 following 5 posts

Postdoc researcher at the Helmholtz Diabetes Center in the @nataliekrahmer.bsky.social Lab and the Perocchi Lab | Formerly University of Oxford | (she/her)

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Reposted by Joana Verissimo Ferreira
Mann Lab @mannlab.bsky.social · 20/02/2026
Ever wondered how the human liver looks like at single-cell, spatial protein resolution? We used single-cell Deep Visual Proteomics to map human liver zonation at the protein level - one hepatocyte at a time. Our paper is out in @natmetabolism.nature.com! www.nature.com/articles/s42...
nature.com
Single-cell spatial proteomics maps human liver zonation patterns and their vulnerability to disruption in tissue architecture - Nature Metabolism
Using the single-cell Deep Visual Proteomics technique, the authors develop a resource providing spatially resolved proteomic analysis of individual cells in human liver tissue.
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Reposted by Joana Verissimo Ferreira
Daniel Haas @daniel-haas.bsky.social · 16/12/2025
I‘m excited to announce that our paper has just been published in 𝑁𝑎𝑡𝑢𝑟𝑒 𝑀𝑒𝑡ℎ𝑜𝑑𝑠. Here, we provide a solution for analyzing subcellular proteomics datasets and extend it to predict lipid localizations as well. #proteomics #lipidomics #bioinformatics #systemsbiology www.nature.com/articles/s41...
nature.com
C-COMPASS: a user-friendly neural network tool profiles cell compartments at protein and lipid levels - Nature Methods
C-COMPASS is an open-source software designed to predict the spatial cellular distribution of proteins and lipids from cellular organelle profiling using a neural network-based regression model.
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Reposted by Joana Verissimo Ferreira
Natalie Krahmer @nataliekrahmer.bsky.social · 04/12/2025
🚀 Excited to share new work from Daniel Haas. In collaboration with Jan Hasenauer and Daniel Weindl within @batenergy.bsky.social we've developed a software tool to map protein and lipid localization in cells, making spatial biology more accessible www.nature.com/articles/s41...
nature.com
C-COMPASS: a user-friendly neural network tool profiles cell compartments at protein and lipid levels - Nature Methods
C-COMPASS is an open-source software designed to predict the spatial cellular distribution of proteins and lipids from cellular organelle profiling using a neural network-based regression model.
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Reposted by Joana Verissimo Ferreira
Journal of Cell Biology @jcb.org · 30/05/2025
Pex30-dependent #membrane contact sites maintain ER lipid homeostasis, say Joana Veríssimo Ferreira (@joanavferreira.bsky.social‬), Pedro Carvalho @dunnschool.bsky.social‬ @ox.ac.uk‬ and colleagues: rupress.org/jcb/article/... @labvanni.bsky.social‬ #lipid #Organelles #Genetics #ER_literature
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Joana Verissimo Ferreira @joanavferreira.bsky.social · 23/05/2025
Excited to share the new work from the Carvalho lab @dunnschool.bsky.social! 🎉This was part of my PhD & a collaboration with the @labvanni.bsky.social & Ernst labs! Big thanks to everyone involved! 🙌 @jcb.org Read more: doi.org/10.1083/jcb.... (1/2)
doi.org
Pex30-like proteins function as adaptors at distinct ER membrane contact sites | Journal of Cell Biology | Rockefeller University Press
Membrane contact sites (MCSs) between the ER and other organelles, such as lipid droplets and peroxisomes, are essential for lipid homeostasis. This study
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Joana Verissimo Ferreira @joanavferreira.bsky.social · 31/01/2025
Last opportunity to submit your abstract before talk selection! Great opportunity to present your work if you are a PhD student or postdoc...
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Joana Verissimo Ferreira @joanavferreira.bsky.social · 14/01/2025
Application review for the 2025 Gordon Research Conference on Molecular Membrane Biology begins on Feb 1. Maximize your chance of acceptance by submitting your application with an abstract before that date! Details: shorturl.at/MqKky and shorturl.at/lYbBM
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Joana Verissimo Ferreira @joanavferreira.bsky.social · 14/01/2025
I finally have made the move to Bluesky! 🙂 I hope to find cell biology/biochemistry content soon. Let me know if you have good suggestions.
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