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James Mulqueeney

@jamesmulqueeney.bsky.social
322 followers 518 following 10 posts

Research fellow at the Smithsonian National Museum of Natural History. Former PhD student at University of Southampton and Natural History Museum, London.

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Reposted by James Mulqueeney
Anieke Brombacher @aniekebrombacher.bsky.social · 07/07/2025
The final paper of my UoS postdoc is out now in PNAS! How to detect developmental plasticity in the fossil record: Featuring @tomezard.bsky.social @jamesmulqueeney.bsky.social @katsamenis.bsky.social @clivetrue.bsky.social @thefosterlab.bsky.social among others www.pnas.org/doi/10.1073/...
pnas.org
PNAS
Proceedings of the National Academy of Sciences (PNAS), a peer reviewed journal of the National Academy of Sciences (NAS) - an authoritative source of high-impact, original research that broadly spans...
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Tom Ezard @tomezard.bsky.social · 03/07/2025
Nice write-up at phys.org/news/2025-06...
phys.org
Analysis provides day-by-day insight into prehistoric plankton's capacity for change
Scientists at the University of Southampton have developed a new way of analyzing fossils, allowing them to see how creatures from millions of years ago were shaped by their environment on a day-to-da...
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James Mulqueeney @jamesmulqueeney.bsky.social · 04/07/2025
Some great work by @aniekebrombacher.bsky.social! Super cool to be part of this collaborative project!
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Tom Ezard @tomezard.bsky.social · 03/07/2025
New paper led by @aniekebrombacher.bsky.social using x-ray CT and laser ablation to detect plastic environmental responses in fossil individuals www.pnas.org/doi/10.1073/pnas.2421549122 featuring @jamesmulqueeney.bsky.social @clivetrue.bsky.social @thefosterlab.bsky.social
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James Mulqueeney @jamesmulqueeney.bsky.social · 27/04/2025
Thrilled to share my second PhD paper with @tomezard.bsky.social & @evoswami.bsky.social focused on the application of landmark-free geometric morphometrics! 🎉 Excited to contribute to advancing shape analysis techniques in biology. Check it out here: doi.org/10.1186/s128...
doi.org
Assessing the application of landmark-free morphometrics to macroevolutionary analyses - BMC Ecology and Evolution
The study of phenotypic evolution has been transformed in recent decades by methods allowing precise quantification of anatomical shape, in particular 3D geometric morphometrics. While this effectiven...
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Reposted by James Mulqueeney
UK-IODP @ukiodp.bsky.social · 25/03/2025
In our March Newsletter we hear from UK-IODP scientists Cedric John, Lewis Grant & @jamesmulqueeney.bsky.social, who've each developed novel applications of machine learning to facilitate rapid, accurate classification of IODP samples issuu.com/uk-iodp/docs... @ecord.bsky.social @anzic.bsky.social
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Ryan N. Felice @rnf.bsky.social · 21/12/2024
turns out you can do some pretty cool stuff with the power of diceCT, SPROUT (www.biorxiv.org/content/10.1...), and the SmARTR pipeline (www.sciencedirect.com/science/arti...)
a 3d rendering of the skull and cranial muscles of the Eurasian oystercatcher (Haematopus ostralegus)
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Dr Alison Cribb @alisoncribb.bsky.social · 18/12/2024
Reminder of the January 8th deadline for this reef palaeoecology PhD project at @sotonoceanearth.bsky.social with @tomezard.bsky.social + @chrisgoatley.bsky.social :) www.findaphd.com/phds/project...
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Dr. Davey F. Wright ⛏️🦕🧬 @daveyfwright.bsky.social · 11/12/2024
Highly recommend this very interesting new paper. I'll be reading it again--and then probably again & again. It's insightful, idea rich, & thought provoking even in places where I disagree w/ interpretations! 🧪 #EvoSky "Three modes of evolution? Remarks on rates of evolution and time scaling"
academic.oup.com
Three modes of evolution? Remarks on rates of evolution and time scaling
Abstract. Rates of evolution get smaller when they are measured over longer time intervals. As first shown by Gingerich, rates of morphological change meas
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Professor Anjali Goswami FRS @evoswami.bsky.social · 24/11/2024
New paper! For all of you working with 3d scans (e.g. micro-CT, MRI), check out SPROUT, a rapid open-source tool for generating segmented and parcellated data, meaning your scans are separated into the individual elements without any manual labelling or training. www.biorxiv.org/content/10.1...
Figure showing diverse datasets analysed with SPROUT, including a skink skeleton, aardvark skull, human heart, concrete block, and foraminifera.
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Professor Anjali Goswami FRS @evoswami.bsky.social · 09/11/2024
Our new paper on #AI for evolutionary morphology is out! This massive team effort covers the history of AI for studying morphology, reviews new tools, provides many case studies & a prospectus for using AI to progress diverse topics in evolutionary morphology. academic.oup.com/iob/article/...
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Professor Anjali Goswami FRS @evoswami.bsky.social · 13/11/2024
Laptops: check. Coffee: check. Giant box of homemade focaccia: check. And with all hands on deck, we are now ready to finish off our paper describing SPROUT, a new semi-automated (emphasis on the automated, for real this time) method for parcellating CT images into 3D segments. Stay tuned!
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