Abstract. Amino acid-based phylogenetics usually relies on first clustering and aligning orthologous proteins. This approach is powerful but computationall

Corals and lichens, though unrelated and from different ecosystems, both depend on internal photosynthetic symbionts, leading to similar traits in morpholo

Abstract. Mitochondrial proteome reconstruction from eukaryotic sequence data typically relies on prediction of mitochondrial targeting signals (MTSs). How

Symbiotic relationships of microorganisms are predicted and cataloged with a machine learning tool.

Proceedings of the National Academy of Sciences (PNAS), a peer reviewed journal of the National Academy of Sciences (NAS) - an authoritative source of high-impact, original research that broadly…

Letter to the Editor

Resource supply is generally considered a dominant driver of microbial diversity. Here, using a four-species bacterial consortium, we asked whether...

Animals have moved from water to land many times, but whether they used the same genetic routes has remained unclear. This study shows that independent land transitions relied mostly on ancient, conse...

Code related to Bonacolta et al. Single Cell Ecology of Orbicella faveolata through bleaching - delCampoLab/ofav_bleaching_sce

Background The symbiosis between corals and dinoflagellate algae is disrupted by heat stress, leading to bleaching and subsequent coral mortality, devastating reef habitats. Despite its planetary-scal...

Abstract. Warnowiid dinoflagellates are known for possessing two of the most complex structures known in single cells: multi-projectile nematocysts and the

One size does not fit all: Assisted evolution enhances heat tolerance, but outcomes vary by trait, environment, and population.