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European Nucleotide Archive (ENA)

@enasequence.bsky.social
295 followers 4 following 143 posts

The European Nucleotide Archive offers open data archiving across species, platforms & applications. A globally comprehensive record & platform for data coordination

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Reposted by European Nucleotide Archive (ENA)
SILVA @arb-silva.bsky.social · 13/07/2026
Public Service Announcement: SILVA has joined the Bluesky community! 

📢🎉 SILVA is part of the the DSMZ Digital Diversity consortium, a Global Core Biodata Resource and an ELIXIR Core Data Resource. www.arb-silva.de Follow for the latest information and announcements 🦠🔬👩‍🔬
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Reposted by European Nucleotide Archive (ENA)
ERGA - European Reference Genome Atlas @ergabiodiv.bsky.social · 20/07/2026
💡 #KnowledgeHighlight | Take a quick tour of the European Nucleotide Archive @enasequence.bsky.social 🧬 🔗 www.ebi.ac.uk/training/onl... Explore more open-access training materials in the ERGA #KnowledgeHub ➡️ knowledge.erga-biodiversity.eu #IT #Infrastructure #Repository @ebi.embl.org
ebi.ac.uk
European Nucleotide Archive - Quick tour
European Nucleotide Archive - Quick tour
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Reposted by European Nucleotide Archive (ENA)
EMBL-EBI @ebi.embl.org · 21/05/2026
Welcome, Mar Gonzalez-Porta 🇪🇸, our new Team Leader for the @enasequence.bsky.social & BioSamples. Her biggest challenge? Managing a rapidly growing data volume, equivalent to 4,000+ years of streaming, while keeping both resources trusted and community-engaged. www.embl.org/news/perspec...
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 18/05/2026
A new report puts a number on what open data is worth. £11.8bn/year The ENA's piece of that picture: petabytes of nucleotide sequence data, permanently archived and freely accessible the sequence layer beneath it all. Open data works because it's infrastructure. Proud to be part of it.
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 12/05/2026
The ENA-BioSamples team at EMBL-EBI is hiring a Full Stack Software Developer! Details here: embl.wd103.myworkdayjobs.com/en-US/EMBL/j...
embl.wd103.myworkdayjobs.com
Full Stack Software Developer
About the team We are seeking a Full Stack Software Developer to join the BioSamples team at the European Bioinformatics Institute (EMBL-EBI). BioSamples is a core biological metadata repository that ...
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Reposted by European Nucleotide Archive (ENA)
Open Research at York @uoyopenres.bsky.social · 01/05/2026
Study data available via @enasequence.bsky.social and alongside code to reproduce analyses at zenodo.org/records/1913... and github.com/yacinebenche... 🔓 💾
zenodo.org
yacinebenchehida/Ithominii_convergence: Version 2 – PLOS bio revisions
Updated version following PLOS Biology review. Includes code corrections, improved figure documentation, and reproducibility fixes.
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Reposted by European Nucleotide Archive (ENA)
EMBL-EBI @ebi.embl.org · 18/03/2026
Life science research depends on global access to sequencing data but this only works when everyone speaks the same technical language. Find out how the INSDC has updated its specifications to simplify data submission for better synchronisation across its partners. www.ebi.ac.uk/about/news/a...
ebi.ac.uk
New specifications for submitting nucleotide sequence data
New INSDC standards support simpler submissions and improve synchronisation of global genome sequence data.
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Europe PMC @europepmc.org · 04/12/2025
Thanks for adding us! We'd also like to highlight a few of the wider @ebi.embl.org ecosystem supporting discovery: @ensembl.org @enasequence.bsky.social @pdbeurope.bsky.social @pride-ebi.bsky.social @interprodb.bsky.social @chembl.bsky.social @intact-ebi.bsky.social @gwascatalog.bsky.social
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Reposted by European Nucleotide Archive (ENA)
EMBL-EBI @ebi.embl.org · 18/11/2025
Antimicrobial resistance (AMR) is a growing health threat, making infections harder to treat and complicating routine medical care. EMBL-EBI’s new AMR portal brings together laboratory resistance data and bacterial genomes in one open platform. #WAAW2025 #ActOnAMR www.ebi.ac.uk/about/news/t... 🧬💻
ebi.ac.uk
A new gateway to global antimicrobial resistance data
New online portal connects bacterial genomes with experimental resistance data to support antimicrobial resistance research.
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Reposted by European Nucleotide Archive (ENA)
ERGA - European Reference Genome Atlas @ergabiodiv.bsky.social · 17/11/2025
👋 See you at the #ERGAPlenary today at 15:00 CET: - Updates from ERGA committees and associated projects, - Presentation by Joana Paupério and Alexey Sokolov on Biodiversity Reference #Genomes at ENA @enasequence.bsky.social and the ERGA Data Portal #community #meeting #genomics #project
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Reposted by European Nucleotide Archive (ENA)
lisacrossman.bsky.social @lisacrossman.bsky.social · 06/11/2025
Had a great day of science at @enasequence.bsky.social !
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Reposted by European Nucleotide Archive (ENA)
ERGA - European Reference Genome Atlas @ergabiodiv.bsky.social · 11/11/2025
🔔 Join the #ERGAPlenary next Monday to learn about #biodiversity genomes at @enasequence.bsky.social & the #ERGA Data Portal - talk by Joana Pauperio and Alexey Sokolov from @ebi.embl.org 📅 17/11 at 15:00 CET 🔗 www.erga-biodiversity.eu/post/biodive... #Data #genomes #ENA @ebpgenome.bsky.social
erga-biodiversity.eu
Biodiversity Reference Genomes at ENA and the ERGA Data Portal
At this month's ERGA Plenary meeting, on Monday, November 17 at 15:00 CET, Joana Paupério and Alexey Sokolov will present about Biodiversity Reference Genomes at ENA (European Nucleotide Archive) and ...
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 03/10/2025
We’re seeing delays in ENA assembly processing & INSDC data exchange outwards due to a surge in recent submissions. Processing should return to normal soon, but we can’t give a timeline for assembly exchange with INSDC partners. Thanks for your patience updates will follow once normality is restored
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Reposted by European Nucleotide Archive (ENA)
EMBL-EBI @ebi.embl.org · 19/06/2025
Listen to the latest episode of #GenomicConnections featuring Joana Pauperio, Biodiversity Curator at @enasequence.bsky.social She joins @ergabiodiv.bsky.social to discuss the power of metadata and how it supports #FAIR data in biodiversity genomics. @biogeneurope.bsky.social
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 26/03/2025
🎉We are excited to launch the Data Hubs Portal! 🎉 This portal provides an interface for the Data Hubs at the ENA. To find out more about the Data Hubs Portal, visit the portal: www.ebi.ac.uk/ena/datahubs/ or see this post from EMBL-EBI: www.ebi.ac.uk/about/news/u....
ebi.ac.uk
ENA Data Hubs Portal
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 04/03/2025
Dear ENA users, We are aware of an issue affecting users attempting to use the Webin Submission Portal at this URL - www.ebi.ac.uk/ena/submit/w... We believe this issue is resolved, but users may have to clear their browser cache in order to fix the issue on their side. Kind Regards, The ENA Team
ebi.ac.uk
The European Bioinformatics Institute < EMBL-EBI
EMBL-EBI Ultra-wide boilerplate page
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Reposted by European Nucleotide Archive (ENA)
EMBL-EBI @ebi.embl.org · 17/02/2025
📢 We’re looking for a new Team Leader! @enasequence.bsky.social is recruiting a Team Leader to shape the strategy and direction for the ENA and Biosamples open data resources. Interested?👇
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 17/12/2024
Proud to be part of the family of resources that brings such immense value to the global scientific community! Check out the survey results 👇
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Reposted by European Nucleotide Archive (ENA)
lisacrossman.bsky.social @lisacrossman.bsky.social · 28/11/2024
Great Day's science visit to @enasequence.bsky.social
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 28/11/2024
ENA is having its annual facilities day event! We kicked off the day getting our guests to break into groups an designing some flags they felt represented their groups!
Flags designed by groups at ENA facilities day
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Reposted by European Nucleotide Archive (ENA)
Theo Sanderson @theo.io · 28/11/2024
A crisp Cambridgeshire morning. Great to be in Hinxton for the @enasequence.bsky.social Facilities Day to discuss @pathoplexus.org and database interoperability
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 27/11/2024
You may have noticed that we have A LOT of posts on our feed. We have imported all our Tweets into BlueSky to make it easier for users to find their favourite posts! Please be aware, although these were all posted today, they will be marked with a "date archived" date when they were originally made
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Reposted by European Nucleotide Archive (ENA)
Colman O'Cathail @colmanoc.bsky.social · 18/11/2024
To all my extended colleagues across the extended science social-verse, @enasequence.bsky.social is also available to be followed. Content and posts pending planning!
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 17/07/2024
The ENA is proud to be recongised by @globalbiodata as a core resource for the life sciences. We continually strive to provide a resource of the highest utility to our community and champion the value of open data. twitter.com/globalbiodata/status/18…
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 20/05/2024
The @ENASequence is truly delighted to have worked with it's partners and build this new membership program. New members will bring a truly global perspective to the INSDC and help work towards more equaitable open data sharing in genomics. twitter.com/emblebi/status/17925772…
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 27/03/2024
Very excited to share our recent publication in @MicrobioSoc Microbial Genomics describing collaborative efforts in analysing data from the European COVID-19 Data Platform. www.ebi.ac.uk/about/news/updates-fr…
ebi.ac.uk
Using Data Hubs to analyse SARS-CoV-2 and other pathogen sequences
The SARS-CoV-2 Data Hubs are a set of tools coupled with infrastructure that support four components: the submission, analysis, presentation and visualisation of SARS-CoV-2 raw read data, and its resulting analyses. What makes Data Hubs attractive is a unique set of features: A new publication in…
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 10/08/2023
🚨🚨Service Announcement🚨🚨 From the 1st of September 2023 the ENA will be placing a rate limit on it's data retrieval APIs. After this date, rates will be limited to 50 requests per second which, if breached, they will be rejected with a "Too Many Requests" error.
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 20/07/2023
Are you going to #ISMBECCB2023 ? The @ENASequence will be there, and we’re looking to engage with people who use our services! We’re also running a survey on how you use ENA Data! forms.gle/hZRjcpEnjGhAaVKCA
forms.gle
ENA Data Use Survey
Thank you for taking the time to complete the ENA data use survey. This survey is designed to better understand and improve the ENA data retrieval experience of users. It should take approximately 9 minutes to complete.
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 19/07/2023
The ENA is also available to follow on LinkedIn! Be sure to follow for content, updates and longer form informative articles about our work and services! www.linkedin.com/company/european-n…
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 05/07/2023
Unifying the search for pathogen data is a key component of this project, and a community lead goal, do not hesistate to get in touch via ena-path-collabs@ebi.ac.uk ! twitter.com/embl/status/16766178812…
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 05/07/2023
This has been a big project for @ENASequence and the wider @emblebi team, and an ongoing project at that. An important step for pandemic preparedness. #pathogensportal twitter.com/emblebi/status/16765721…
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 27/06/2023
Are you going to #ISMB2023? @ENASequence will be there presenting updates and ongoing work, but we also seek to speak to people about using data from the ENA and our service? Let us know if you'll be there! Don't forget we are still capturing feedback too: t.co/gpatiZSw5O
docs.google.com
ENA Data Use Survey
Thank you for taking the time to complete the ENA data use survey. This survey is designed to better understand and improve the ENA data retrieval experience of users. It should take approximately 9 minutes to complete.
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 13/06/2023
We've already captured a wide array of responses in our Data Use Survey. Make sure you don't miss your chance to make your voice heard! twitter.com/ENASequence/status/1661…
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 09/06/2023
Reminder to feedback on how you use the ENA services for data retrieval via our survey! Your feedback is incredibly valuable and will shape the future of our services. docs.google.com/forms/d/e/1FAIpQLSc…
docs.google.com
ENA Data Use Survey
Thank you for taking the time to complete the ENA data use survey. This survey is designed to better understand and improve the ENA data retrieval experience of users. It should take approximately 9 minutes to complete.
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 07/06/2023
Our data useage survey is still open to responses! Please do take a few minutes out of your day to provide us with invaluable insights into how our open nucleotide is used. twitter.com/ENASequence/status/1661…
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 01/06/2023
Spatiotemportal data is now mandatory for all ENA samples as of today! A major step for improving nucleotide metadata. twitter.com/ENASequence/status/1663…
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 31/05/2023
Reminder to feedback on how you use the ENA services for data retrieval via our survey! Your feedback is incredibly valuable and will shape the future of our services. docs.google.com/forms/d/e/1FAIpQLSc…
docs.google.com
ENA Data Use Survey
Thank you for taking the time to complete the ENA data use survey. This survey is designed to better understand and improve the ENA data retrieval experience of users. It should take approximately 9 minutes to complete.
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 30/05/2023
As per our previous announcement, effective from the 1st June 2023, mandatory spatiotemportal information will be in palce for all new samples submitted to the ENA. Quote tweet for more info. Join our announcement mailing list to never miss another update: t.co/so8icwP4eK t.co/Iq...
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 24/05/2023
The ENA has designed a brief Data Use Survey to better understand our users who access and download data from the ENA. We hope to make use of feedback received from this survey to understand and improve user experience. Your views matter to us! t.co/gpatiZSw5O
docs.google.com
ENA Data Use Survey
Thank you for taking the time to complete the ENA data use survey. This survey is designed to better understand and improve the ENA data retrieval experience of users. It should take approximately 9 minutes to complete.
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 25/04/2023
The ENA and its collaborators are excited to have this preprint out, describing our efforts in creating the SARS-CoV-2 Data Hubs. This work describes mobilisation of open SARS-CoV-2 data, the tools developed to support that mobilisation alongside the analysis efforts undertaken. t.co/vpS...
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 04/04/2023
The ENA and its INSDC partners are set to introduce mandatory spatiotemporal information for new samples by the end of May 2023. From now, users will see spatiotemporal fields in all ENA sample checklists by default. Read the full news item here: t.co/NbEvyJfyFk
ebi.ac.uk
ENA to introduce mandatory spatiotemporal annotations
The European Nucleotide Archive database introduces mandatory spatiotemporal metadata for data submissions.
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 16/03/2023
Nobody better to support a tricky submission than our passionate helpdesk team! www.ebi.ac.uk/ena/browser/support twitter.com/GrohmannTeresa/status/1…
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 09/03/2023
Cross-linking life science infrastructures for molecular and taxonomic data together with @WRMarineSpecies, @EukRef, @OBISNetwork and @GBIF. A fantastic, productive @BlueCloudEU workshop in synergy with #H2020 projects @Bicikl_H2020, @EU_AtlantECO and DTO-Bioflow!
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 09/03/2023
🚨Service Update🚨 We will be making some changes to what taxon IDs are considered submittable in the near future. For all submissions, except "clone or isolate" assemblies, we will no longer require a full binomial name, but the taxon ID must still be of species rank.
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 18/01/2023
1/9 This #tweetorial will run you through umbrella studies at the ENA. As you may already know, a study groups together data submitted to the archive and controls its release date. Umbrella studies are study objects in the ENA which provide hierarchical grouping of other studies
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 01/01/2023
Happy New Year from everyone @ENASequence! We’re looking forward to a 2023 filled with open data!
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 16/12/2022
The ENA is incredibly proud and honored to be recognised by @globalbiodata as a critical resource for the life sciences and biomedical science across the world! We stand alongside many amazing resources and hope to have collectively sustainable future. t.co/sKkzPT0B5y
ebi.ac.uk
EMBL-EBI databases considered critical to life sciences
Open data resources that enable global research and development recognised by the Global Biodata Coalition.
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 16/12/2022
🚨🚨Christmas Service Update 🚨🚨 Between 21st December 2022 and 2nd January 2023 ENA services such as submissions and retrieval will continue to be available.
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 14/12/2022
The first cohort study linking data from different categories for SARS-CoV-2 is now available in the Pathogens Portal Cohort Browser. Thanks to @erasmusmcintl for providing the first dataset through the @ReCoDID2 project. www.ebi.ac.uk/ena/pathogens/v2/coho…
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European Nucleotide Archive (ENA) @enasequence.bsky.social · 09/12/2022
🚨 The latest ENA NAR DB issue paper has been published: doi.org/10.1093/nar/gkac1051 🚨 It provides a summary of ENA content and services, an update on our data presentation and submissions systems, and some selected developments from the last year.
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