Emmarie Alexander @emistasis.bsky.social · 23/07/2026Super excited to share that my first first-author paper is ~finally~ published! I started working on chrY back in 2018 as a college freshman, using it as a phylogeographic marker for foxes. 8 years later, I’m wrapping up my PhD focused on chrY evolution. Big moment for me in many ways. :’) 040
Reposted by Emmarie AlexanderJulian Catchen @jcatchen.bsky.social · 18/11/2025I am recruiting graduate students to my genomics-focused lab in EEB at Illinois Urbana-Champaign. Please spread the word if you know any students with an interest in a computational focus to genomics research! evol.mcmaster.ca/brian/evoldi...evol.mcmaster.cahttps://evol.mcmaster.ca/brian/evoldir/GradStudentPositions//UIllinois.EEB.GenomicsThe Catchen Lab (https://catchenlab.life.illinois.edu/), in the Department of Evolution, Ecology, and Behavior at the University of Illinois at Urbana-Champaign is recruiting graduate students to join... 01533
Emmarie Alexander @emistasis.bsky.social · 07/10/2025an angel loses its wings every time there is a publication that lists what software was used without specifying any flags or options like… HOW dare you say “we used standard parameters” for a program that doesn’t even have ANY! 😭 010
Reposted by Emmarie AlexanderKayce Bell @kaycebell.bsky.social · 23/09/2025Hi! We need lice for our diversity and adaptation project. Specifically, we need lice from zebras, camelids (camels, llamas, alpacas, vicuñas, guanacos) & aardvarks. If you or someone you know might have lice, I'm happy to discuss our inclusive collaboration plans! sites.google.com/nhm.org/anop...sites.google.comMammals & LiceWe are interested in understanding what drives host-parasite relationships. We are using the Anoplura (sucking lice) parasite and mammalian host system to generate a comprehensive sucking louse phylog... 16961
Reposted by Emmarie AlexanderAdam Phillippy @aphillippy.bsky.social · 24/09/2025🚂 The T2T train keeps rolling: "The formation and propagation of human Robertsonian chromosomes" with Gerton and Garrison labs is out! What's a Robertsonian chromosome? Let Jen tell you herself in this great video, or read our paper: [1/3] 📺 youtu.be/JmlY5omxQVc 📄 www.nature.com/articles/s41...youtu.beHow Stowers Scientists Found the DNA Site Where Robertsonian Chromosomes FuseYouTube video by Stowers Institute for Medical Research 44528
Reposted by Emmarie AlexanderHarmit Singh Malik @harmitmalik.bsky.social · 20/09/2025Any academic folks on H1B visas (even with stamps in passports) please get legal advice from your University attorneys before leaving the US. 8283134
Emmarie Alexander @emistasis.bsky.social · 13/09/2025Got to spend this morning teaching R to a bunch of excited students & faculty! Feels nice to come back as an instructor for the same software carpentry workshops I attended as a first year PhD :’) many thanks to @dwbapst.bsky.social & Heather Baldi for being awesome and organizing this event. 0102
Reposted by Emmarie AlexanderMark Hibbins, Great Lakes Swashbuckler @rejectresubmit.bsky.social · 21/08/2025I'm hiring a postdoc to work in theoretical / computational phylogenomics! More info at tinyurl.com/63hb5ew8. Please share! 02437
Reposted by Emmarie AlexanderHeng Li @lh3lh3.bsky.social · 31/07/2025Longdust, a new tool to identify highly repetitive STRs, VNTRs, satellite DNA and other low-complexity regions (LCRs). Similar to SDUST but for long regions. github.com/lh3/longdustgithub.comGitHub - lh3/longdust: Identify long STRs, VNTRs, satellite DNA and other low-complexity regions in a genomeIdentify long STRs, VNTRs, satellite DNA and other low-complexity regions in a genome - lh3/longdust 07528
Reposted by Emmarie AlexanderMark Hibbins, Great Lakes Swashbuckler @rejectresubmit.bsky.social · 02/10/2024I'm recruiting students / postdocs to join my new lab at the University of Rochester for Fall 2025 onwards! If you're interested in phylogenetic comparative methods, genome evolution, and/or computational biology, please get in touch! More info: mhibbins.github.iomhibbins.github.ioHibbins Lab 04857
Reposted by Emmarie AlexanderSimons Foundation @simonsfoundation.org · 02/07/2025There is one month left to apply for our Simons Graduate Fellowships in Ecology and Evolution! These awards provide support for students entering U.S.-based Ph.D. programs with a plan to perform research in #ecology and #evolution. www.simonsfoundation.org/grant/simons... #sciencesimonsfoundation.orgSimons Graduate Fellowships in Ecology and EvolutionThe purpose of these awards is to provide support for students entering U.S.-based Ph.D. programs with a plan to perform research in ecology and evolution. While we will consider all projects in ecolo... 03150
Reposted by Emmarie AlexanderJeremy Yoder says no war @jbyoder.org · 23/06/2025The @sse-evolution.bsky.social public policy committee is organizing folks to send postcards to Congress from #Evol2025, stop by the booth in the exhibition hall 12215
Emmarie Alexander @emistasis.bsky.social · 22/06/2025Really great group of scientists working on really cool stuff! Come say hi and learn more about the project. 030
Reposted by Emmarie AlexanderChanda Prescod-Weinstein 🌌 @chanda.blacksky.app · 22/06/2025My heart is with my Iranian friends and their families. May everyone live. 162585454
Reposted by Emmarie AlexanderDmitri Petrov @petrovadmitri.bsky.social · 02/06/2025Check out this brand new fellowship from the Simon’s Foundation in Ecology and Evolution. Incoming grad students this year are eligible to apply. No citizenship restrictions. www.simonsfoundation.org/grant/simons...simonsfoundation.orgSimons Graduate Fellowships in Ecology and EvolutionThe purpose of these awards is to provide support for students entering U.S.-based Ph.D. programs with a plan to perform research in ecology and evolution. While we will consider all projects in ecolo... 05669
Emmarie Alexander @emistasis.bsky.social · 27/05/2025TBH I’ve been overwhelmed, and occasionally discouraged, by the world recently. I was awarded best talk at a symposium last week. One of the judge’s comments was “presenter’s enthusiasm and passion for her research is contagious.” 🥲 ‘Twas a much needed win. My love for science will not falter! 010
Reposted by Emmarie AlexanderJudith Mank @judithmank.bsky.social · 12/04/2025We are looking for new manager for our computing unit! If you have experience in both biology and computers, this might be the perfect job for you! UBC is a lovely place, and Zoology is a fantastic, collaborative and kind department. Apply by May 4th at ubc.wd10.myworkdayjobs.com/ubcstaffjobs...ubc.wd10.myworkdayjobs.comBiosciences Computing ManagerStaff - Non Union Job Category M&P - AAPS Job Profile AAPS Salaried - Information Systems and Technology, Level D Job Title Biosciences Computing Manager Department Administrative Leadership | Dep... 01432
Emmarie Alexander @emistasis.bsky.social · 11/04/2025omg how exciting! I can’t tell you how many times I cited Presgraves 2010 for my candidacy exams - it endeared itself to me after a while. 🙈 I’m certain this paper will too! 020
Reposted by Emmarie AlexanderEvolution Meetings @evolmtg.bsky.social · 06/03/2025Hello graduate students! Volunteer travel award applications are due March 21, 2025. In return for working two ~4h shifts, graduate student members of one or more of our societies can receive a rebate equal to 100% of the regular early student member registration fee. 21110
Reposted by Emmarie Alexanderc0nc0rdance @c0nc0rdance.bsky.social · 08/05/2024Besides being adorable tactical assault possums, ALMOST ALL ARMADILLOS ARE BORN AS IDENTICAL QUADRUPLETS. (sorry, I *have* to shout this) It's a quirk of their reproductive system called polyembryony, an adaptation to an incredibly small implantation site in the 'dillo uterus. 421155290
Reposted by Emmarie AlexanderStand Up for Science! @standupforscience.net · 01/03/2025"When you hear about patients surviving stage 4 cancer because of immunotherapy, that was based on NIH research over many decades. When you hear about sickle cell disease being cured because of CRISPR gene editing, that was built on years of research supported by NIH" apnews.com/article/nih-...apnews.comRenowned geneticist Francis Collins retires from NIH, urging 'respect' for embattled workersDr. Francis Collins, a renowned geneticist, and former longtime director of the National Institutes of Health, is retiring from the government agency and urging “respect” for its embattled workers. 2333125
Reposted by Emmarie AlexanderFrederic Delsuc @freddelsuc.bsky.social · 25/02/2025New @erc.europa.eu funded #ConvergeAnt preprint on using the evolution of pseudogenes to document the parallel regression of oral anatomy in myrmecophagous mammals posted at @biorxiv-evobio.bsky.social www.biorxiv.org/content/10.1... 0178
Reposted by Emmarie AlexanderRosa Lafer-Sousa @rosalafersousa.bsky.social · 24/02/2025As a result of Trump’s slashes to research funding, dozens of graduate programs have announced reductions and cancellations of graduate admissions slots. If you are an impacted applicant, please fill out this survey: docs.google.com/forms/d/e/1F... 🧪🧠🧬🔬🥼👩🏼🔬🧑🔬docs.google.comGrad Admission Impacts SurveyIt is grad admissions season and many postbacs are feeling the chilling impacts of the Trump administration's recent executive orders freezing and slashing extramural research funding. Dozens of gradu... 8260266
Reposted by Emmarie AlexanderArtologica aka Michele Banks @artologica.net · 15/02/2025Really pleased with this mitosis watercolor. Analog #sciart ftw 419720
Reposted by Emmarie AlexanderHarmit Singh Malik @harmitmalik.bsky.social · 15/02/2025Each piece of good news no matter how small is like a knife of light and we will need many to cut through this shroud. There I no question we will need a concerted effort to help our colleagues who find themselves in a terrible situation through no fault of their own. But we can do both. /2 112521
Reposted by Emmarie AlexanderMatthew Hahn @3rdreviewer.bsky.social · 10/02/2025New paper led by @glom.bsky.social! "Unprecedented female female bias in the aye-aye, a highly unusual lemur from Madagascar" 1/ journals.plos.org/plosbiology/... 43121
Reposted by Emmarie AlexanderJenny Tung @jennytung.bsky.social · 13/01/2025Abstract deadline in T - one month! Please consider joining us—it’s a great set of session chairs/speakers. 064
Reposted by Emmarie AlexanderStu West @stuwest.bsky.social · 08/01/2025Comparative genomics needs to use phylogenetic methods: why, how and common questions www.nature.com/articles/s41... @annadewar.bsky.social @lauriebelch.bsky.socialnature.comA phylogenetic approach to comparative genomics - Nature Reviews GeneticsControlling for phylogeny is essential in comparative genomics studies, because species, genomes and genes are not independent data points within statistical tests. The authors review the application ... 03218
Reposted by Emmarie AlexanderMelissa Wilson @sexchrlab.bsky.social · 11/01/2025Super excited to see that this work @drpintothe2nd.bsky.social and I collaborated on with some super smart people at NIST for the Genome in a Bottle Benchmarking project is out! A benchmark for X and Y chromosome small variants! www.nature.com/articles/s41...nature.comSmall variant benchmark from a complete assembly of X and Y chromosomes - Nature CommunicationsThe paper describes a Genome in a Bottle benchmark for the X and Y chromosomes enabled by complete chromosome assemblies. This benchmark enables users to evaluate small variant accuracy in challenging... 0156
Reposted by Emmarie AlexanderAaron Quinlan (he/him) @aaronquinlan.bsky.social · 03/12/2024Biology of Genomes 2025 is coming up: - meeting dates: May 6 - 10, 2025 - abstract deadline: Feb 14, 2025 We hope to see you there for another great meeting with a fantastic speaker lineup! meetings.cshl.edu/meetings.asp...meetings.cshl.eduBiology of GenomesCold Spring Harbor Laboratory Meetings & Courses -- a private, non-profit institution with research programs in cancer, neuroscience, plant biology, genomics, bioinformatics. 16634
Reposted by Emmarie Alexanderashley fairbanks @ziibiing.com · 09/01/2025as LA is burning, a swath of the country is recovering from an ice storm, Alabama is preparing for up to 6” of snow and I’m praying for the TX power grid, a reminder: we don’t need climate action just for future generations, we need it now. the climate crisis is here, all around us 762413089260
Reposted by Emmarie AlexanderPLOS Biology @plosbiology.org · 07/01/2025PRDM9 helps determine the location of recombination hotspots in many mammals. Study of salmonid fish reveals that #PRDM9 function is conserved across vertebrates, and this peculiar evolutionary runaway caused by PRDM9 has been active for 100s of millions of years🧪 @plosbiology.org plos.io/3DIvFCG 0167
Reposted by Emmarie AlexanderFelix Javier @felixjavier.bsky.social · 23/10/2024I started gathering a list for REUs/Summer research opportunities for undergraduate students in Ecology/Conservation/Evolutionary Biology. Feel share to share with any undergraduate students who may be interested in participating in *PAID* research. docs.google.com/spreadsheets...docs.google.comREUs/Summer Research 2024 List (Ecology and Evolution) 75451
Emmarie Alexander @emistasis.bsky.social · 16/12/2024I’m almost certain you can’t guess what species I’m currently looking at sequencing data for. ;-) 010
Reposted by Emmarie AlexanderDr. Kat Napaaqtuk❄️ @napaaqtuk.bsky.social · 14/12/2024I have an ambitious undergrad who wants to learn Python on her own over the break. Suggestions for online tutorials? 12143160
Reposted by Emmarie AlexanderHenry North @henrylnorth.bsky.social · 11/12/2024“We found no evidence of introgression between dingoes and domestic dogs and show that previous work has likely mischaracterized shared ancestral genetic variation as evidence for hybridization” ! This completely changes the way we think about dingo conservation & taxonomy 04317
Reposted by Emmarie AlexanderMatthew Hahn @3rdreviewer.bsky.social · 10/12/2024New paper led by @yadirapga.bsky.social! Even though opossums have kids at 0.5 years, they still have typical male-biased mutation (though not quite as high as humans). "Low mutation rate but high male-bias in the germline of a short-lived opossum" www.biorxiv.org/content/10.1...biorxiv.orgLow mutation rate but high male-bias in the germline of a short-lived opossumAge and sex have been found to be important determinants of the mutation rate per generation in mammals, but the mechanisms underlying these factors are still unclear. One approach to distinguishing b... 13616
Reposted by Emmarie AlexanderSociety for the Study of Evolution @sse-evolution.bsky.social · 06/12/2024Applications now open for the 2025 International Travel Stipends to attend #Evol2025! Funds cover registration, travel, food, and lodging. Can also be used to attend #ESEB2025! Apply by January 31: buff.ly/3ZEWUqe @evolmtg.bsky.social 04045
Reposted by Emmarie AlexanderSantiago Claramunt @sclaramunt.bsky.social · 16/11/2024I'm recruiting a PhD student to join my lab at the University of New Orleans starting in Fall 2025. Research topics will focus on building and using phylogenies to study the diversification of birds, with an emphasis on Neotropical bird radiations. Contact me if interested. 16658
Reposted by Emmarie AlexanderJudith Mank @judithmank.bsky.social · 28/11/2024Recent studies have revealed unexpected Y chromosome diversity and suggest that the Y may play a big role in evolution. @vdbijl.bsky.social and I wrote this perspective for @evolletters.bsky.social with a few suggestions and requests. academic.oup.com/evlett/advan... Figs by www.jacelyndesigns.com 26129
Reposted by Emmarie AlexanderJessica Light (she/her) @jeclight.bsky.social · 23/11/2024@emistasis.bsky.social 021
Emmarie Alexander @emistasis.bsky.social · 23/11/2024Excited that my first bluesky post is to celebrate passing my qualifying exams! I'm a Ph.D. candidate now - woohoo! 🥳🐾🐱 030