iiinova — where your digital self keeps evolving

Reposted by Eduardo Andrés León

IPBLN-CSIC @ipblncsic.bsky.social · 25/11/2025

Today in the IPBLN, Eduardo Andrés León, PhD, from the IPBLN Bioinformatics Unit, has given a WIP presentation titled: ‘State-of-the-art bioinformatics at the IPBLN: from archives to results’. Thanks Edu!! @eandresleon.bsky.social

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Eduardo Andrés León @eandresleon.bsky.social · 30/06/2025

It's going to be a huge pleasure to talk about miARma. If you have bulk RNA-Seq data and no idea how to analyze it, this is your tool

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Reposted by Eduardo Andrés León

ecSeq Bioinformatics @ecseq.bsky.social · 14/02/2025

🚀 Streamline your bioinformatics workflows! 🧬 Join our Nextflow workshop, May 19-21, 2025—perfect for beginners. 💻 Sign up: www.ecseq.com/workshops/wor... #Nextflow #Bioinformatics #Genomics

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Eduardo Andrés León @eandresleon.bsky.social · 03/02/2025

Da comienzo el III congreso de investigación PTS. Esperemos que haya más paridad en las charlas #congresoPTS

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Reposted by Eduardo Andrés León

Stephen Turner @stephenturner.us · 22/01/2025

Exploring SNP filtering strategies: the influence of strict vs soft core www.microbiologyresearch.org/conten… 🧬🖥️🧪 code (rust): github.com/rrwick/Core-SNP-filter

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Eduardo Andrés León @eandresleon.bsky.social · 16/01/2025

Hoy toca hablar de opciones de TFM (y otros) a los alumnos del máster en Bioinformática y Ciencia de datos en Medicina personalizada de precisión y Salud del ISCIIII. Si estás interesado en la biología computacional y bioinformática, el @bcbhubcsic.bsky.social del @csic.es es tu opción

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Reposted by Eduardo Andrés León

Broad Institute @broadinstitute.org · 10/12/2024

What a cell does depends on its location. Experiments like single cell sequencing strip away signs of where a cell was in its original organ or tissue. New spatial -omics techniques collect in-depth molecular data from cells while retaining that spatial information. Learn more: youtu.be/izhZ9VB1jRM

youtu.be

Spatial -omics: "Location, location, location" applies to biology, too

YouTube video by Broad Institute

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Reposted by Eduardo Andrés León

Johanna Joyce @johannajoyce.bsky.social · 25/11/2024

Women are under-represented at senior levels in #academia globally, & across all #science 🧪 disciplines, as shown by these "scissor-shaped curves" ✂️ So how can we ever achieve #gender #equality? We discuss various strategies in this #Cell Commentary #WomeninSTEM www.cell.com/cell/fulltex... 🧵 1/

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Reposted by Eduardo Andrés León

Lior Pachter @lpachter.bsky.social · 25/11/2024

Another example of the different results one gets from a Scanpy vs. Seurat analysis, in this case a Visium HD dataset from academic.oup.com/bioinformati... 13 vs. 20 clusters. And qualitatively different results, corroborating what we saw in biorxiv.org/content/10.1...

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Reposted by Eduardo Andrés León

Ioannis Vlachos @ioavlachos.bsky.social · 24/11/2024

Starter a Spatial Tissue Profling/Omics/Biology Startup package. Will be updating often. Please stop by again soon! go.bsky.app/7a9Frz9

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Reposted by Eduardo Andrés León

Eric Topol @erictopol.bsky.social · 24/11/2024

Very good, concise summary of the gut-brain axis of communication and interoception www.cell.com/current-biol... open-access

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Reposted by Eduardo Andrés León

Katherine Lemon @kathlemon.bsky.social · 20/11/2024

We're hiring a Bioinformatics Analyst 1 to do bioinformatic research on human nasal microbiota using human nasal epithelial organoids. Will work closely with our experienced bacterial bioinformatician. Great opportunities for authorships and for on-the-job learning. jobs.bcm.edu/job/Bioinfor...

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Reposted by Eduardo Andrés León

Stephen Turner @stephenturner.us · 22/11/2024

Gene count estimation with pytximport enables reproducible analysis of bulk RNA sequencing data in Python academic.oup.com/bioinformatics/adv… 🧬🖥️🧪 github.com/complextissue/pytximport

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Reposted by Eduardo Andrés León

Su-In Lee @suinlee.bsky.social · 23/11/2024

Here is a #compbio starter kit! go.bsky.app/QVPoZXp To all the #Bioinformatics #Genomics #MachineLearning folks: please RP and let’s build this together!

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