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Deepti Varshney

@dvarshney.bsky.social

Reposted by Deepti Varshney

MAdLand @watertoland.bsky.social · 01/10/2026

Our first short talk of the day 🌱 @dvarshney.bsky.social from @rensingstefan.bsky.social lab in Freiburg is exploring the origins of land plants through gene family evolution and a reproducible Galaxy workflow. #MAdLand2026 #plantsci

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Reposted by Deepti Varshney

Stefan A. Rensing @rensingstefan.bsky.social · 23/08/2026

Can the pretrained transformer-based architecture TabPFN predict plant organismal complexity based on their complement of transcription factors? Yes it can: www.biorxiv.org/content/10.6... Happy to hear your thoughts! @dvarshney.bsky.social @jandevries.bsky.social @watertoland.bsky.social

biorxiv.org

Prediction of plant organismal complexity based on transcription factor annotation: an AI approach

How morphological complexity evolves is still enigmatic. While there is evidence in algae and plants as well as animals that diversification of the repertoire of transcription factors (TF) is causativ...

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Reposted by Deepti Varshney

Galaxy Project @galaxyproject.bsky.social · 27/07/2026

The 2026 Galaxy update has received its first citation! 🎉 A new study published in Nutrients used Galaxy to help analyze differences in gut microbiota while investigating how normal and reddened mung bean soup affect heat stress-related damage in mice. Check it out! doi.org/10.3390/nu18...

doi.org

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Reposted by Deepti Varshney

MAdLand @watertoland.bsky.social · 02/06/2025

‼️ Registration for the Annual MAdLand Meeting 2025 is now open! Join us from 30.09 – 02.10 in the beautiful city of Osnabrück to discuss latest trends in plant science & reconnect with an amazing #Plantsci community #MAdLand2025 #Evolution 🌱 Learn more and register here: madland-meeting.de/2025/

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Reposted by Deepti Varshney

MAdLand @watertoland.bsky.social · 11/02/2025

@shiltemann.bsky.social and Deepti Varshney from @uni-freiburg.de giving insights into DataPLANT, MAdLand, and Galaxy: Tools and Resources for Plant Research @ #MBP2025 in Hennef 🌱

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Reposted by Deepti Varshney

Sjon Hartman @hartman-plantlab.com · 11/02/2025

A @watertoland.bsky.social talk at #MBP2025 by Saskia and Deepti of @uni-freiburg.de on tools in #plantscience, including @galaxyproject.bsky.social 🌱

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