Sign in

Saskia Hiltemann 🍍

@shiltemann.bsky.social
167 followers 241 following 5 posts

Bioinformatics Post-Doc Uni Freiburg, Coordinator of the Galaxy Training Network, DataPLANT data steward, lover of cats, space, crochet, puzzles, CTFs & more Be excellent to each other! She/her 🏳️‍🌈

PostsRepliesMedia
Reposted by Saskia Hiltemann 🍍
DOMPS @domps-ufr.bsky.social · 02/04/2025
We concluded the second day with two exciting workshops: •Science illustration with Michal Rössler (freelancer), and •Introduction to bioinformatic tools related to the evolution of land plants with @dvarshney.bsky.social and @shiltemann.bsky.social (from @watertoland.bsky.social).
092
Reposted by Saskia Hiltemann 🍍
Bérénice Batut @bebatut.bsky.social · 28/03/2025
🚀 New paper alert! 🚀 Excited to share latest #Galaxy #Ecology work in GigaScience: "Guidance framework to apply best practices in ecological data analysis: lessons learned from building Galaxy-Ecology" 🌿🔬 🔗 Read it here: academic.oup.com/gigascience/... #OpenScience @galaxyproject.bsky.social
academic.oup.com
Guidance framework to apply best practices in ecological data analysis: lessons learned from building Galaxy-Ecology
Abstract. Numerous conceptual frameworks exist for best practices in research data and analysis (e.g., Open Science and FAIR principles). In practice, ther
143
Reposted by Saskia Hiltemann 🍍
DOMPS @domps-ufr.bsky.social · 31/03/2025
This week we will have our 3rd internal DOMPS Symposium. We are really looking forward to it, so here is the schedule as teaser. Find out more about the keynote speakers and workshops on the website. dompssymposium.wixsite.com/domps
064
Reposted by Saskia Hiltemann 🍍
🛒 🇪🇺 Buy European 🇪🇺 (+🇨🇦). USA broke up with you. Get over it 🇪🇺💪 @buyeuropean.eurosky.social · 09/03/2025
Another useful website to find out which products and brands NOT to buy: isitamerican.eu #BuyEuropean 🇪🇺💪👍
isitamerican.eu
0112
Saskia Hiltemann 🍍 @shiltemann.bsky.social · 14/02/2025
Great GTN & Galaxy Hackathon by the SPOC community and ELIXIR-UK! Thanks to @nomadscientist.bsky.social for leading the effort! @elixiruknode.org @galaxyproject.bsky.social #galaxyproject
Statistics about the event. 3 new contributors, 19 Pull requests made, 8 tutorials updated, 9 issues raised, and more!
132
Reposted by Saskia Hiltemann 🍍
GTN @galaxytraining.bsky.social · 14/02/2025
SPOC HDR UK ELIXIR-UK CoFest 2025: How did it go? Read more at training.galaxyproject.org/training… @galaxyproject.bsky.social
024
Reposted by Saskia Hiltemann 🍍
Stefan A. Rensing @rensingstefan.bsky.social · 12/02/2025
The 2025 #scicomm award of the @molplantsci.bsky.social section of @plantsciencedbg.bsky.social goes to @somssich.bsky.social - congratulations! You might know Marc by his plant science starter kit and his plant science classics post. #MBP2025
2213
Reposted by Saskia Hiltemann 🍍
MAdLand @watertoland.bsky.social · 11/02/2025
Short reminder 🌱 The International Plant EVO-DEVO symposium "Evolution of Plant Reproduction" organized by @icips.bsky.social will take place near the botanical garden of Berlin (Germany) from March 25-28, 2025. To register, go to: dfg-icips.org/berlin2025/ Deadline registration: 14.02.2025
001
Reposted by Saskia Hiltemann 🍍
Galaxy Project @galaxyproject.bsky.social · 10/02/2025
The Freiburg Galaxy Team is happy to announce this year's European Galaxy Days galaxyproject.org/events/2025-10-01… . Please mark you calendar: October 1st to 3rd We are looking forward seeing you in Freiburg ! #UseGalaxy #GalaxyProject #UniFreiburg #EOSC
galaxyproject.org
European Galaxy Days (EGD)
European Galaxy Days meeting in Autumn 2025
0811
Reposted by Saskia Hiltemann 🍍
MAdLand @watertoland.bsky.social · 11/02/2025
@shiltemann.bsky.social and Deepti Varshney from @uni-freiburg.de giving insights into DataPLANT, MAdLand, and Galaxy: Tools and Resources for Plant Research @ #MBP2025 in Hennef 🌱
1196
Reposted by Saskia Hiltemann 🍍
Stefan A. Rensing @rensingstefan.bsky.social · 11/02/2025
@shiltemann.bsky.social and Deepti Varshney on computational plant science tools developed in the framework of @nfdi4plants.bsky.social @watertoland.bsky.social @galaxyproject.bsky.social usegalaxy.eu @uni-freiburg.de #MBP2025
usegalaxy.eu
Galaxy
Galaxy is a community-driven web-based analysis platform for life science research.
065
Saskia Hiltemann 🍍 @shiltemann.bsky.social · 23/01/2025
Great list of European alternatives to popular US tech services (e.g. cloud computing, file hosting, maps, translation, messaging, and much more) european-alternatives.eu/categories
european-alternatives.eu
Service categories | European Alternatives
List of all categories on European Alternatives
031
Reposted by Saskia Hiltemann 🍍
Bérénice Batut @bebatut.bsky.social · 08/01/2025
Our new preprint "microGalaxy: A gateway to tools, workflows, and training for accessible, reproducible, and FAIR microbial data analysis" is live! 🎉 📝 Read it here: www.biorxiv.org/content/10.1... #Microbiome #FAIRdata #usegalaxy @galaxyproject.bsky.social
biorxiv.org
microGalaxy: A gateway to tools, workflows, and training for reproducible and FAIR analysis of microbial data
Microbial research generates vast and complex data from diverse omics technologies, necessitating innovative analytical solutions. microGalaxy (Galaxy for Microbiology) addresses these needs with a us...
12815
Saskia Hiltemann 🍍 @shiltemann.bsky.social · 20/12/2024
Have a look at your GTN community wrapped for 2024! Happy Holidays!
010
Reposted by Saskia Hiltemann 🍍
GTN @galaxytraining.bsky.social · 19/12/2024
Attention Dutch Researchers! Join the half-day workshop at SURF on January 28, 2025 to learn how to deploy your own Galaxy on the SURF Research Cloud. Followed by drinks and networking with the Galaxy-NL community! More info: training.galaxyproject.org/events/2025-... @galaxyproject.bsky.social
training.galaxyproject.org
Galaxy at SURF Research Cloud workshop
Half-day workshop demonstrating the local Galaxy instance built for users of SURF Research Cloud.
012
Reposted by Saskia Hiltemann 🍍
Joanna Kacprzyk @joannakacprzyk.bsky.social · 03/12/2024
A survey on why people want to study and work with plants: please participate and share <3 forms.gle/btg9GP1L3CTh...
forms.gle
Plant Biologists and How to Find Them?
We are Dr Joanna Kacprzyk and Dr Rainer Melzer from School of Biology and Environmental Science at University College Dublin, Ireland. Our project Plant Biologists and How to Find Them? aims to invest...
03640
Reposted by Saskia Hiltemann 🍍
Stefan A. Rensing @rensingstefan.bsky.social · 13/12/2024
Proud to share TAPscan v4, automated annotation of 138 TF families; code, webtool and database available online. @watertoland.bsky.social @nfdi4plants.bsky.social @jandevries.bsky.social @shiltemann.bsky.social doi.org/10.1111/tpj....
Diagram of the TAPscan v4 workflow
04223
Reposted by Saskia Hiltemann 🍍
GTN @galaxytraining.bsky.social · 03/12/2024
Credit where it’s due: GTN Reviewers in the spotlight We would like to recognise and thank all of the reviewers who have contributed. Today, we are highlighting your efforts across every learning material in the GTN training.galaxyproject.org/training…
training.galaxyproject.org
Credit where it's due: GTN Reviewers in the spotlight
We would like to recognise and thank all of the reviewers who have contributed to the GTN tutorials; your efforts are greatly appreciated, and we are grateful for your contributions to the GTN communi...
047
Reposted by Saskia Hiltemann 🍍
John Scalzi @scalzi.com · 20/11/2024
Yes! Alt text is useful and quickly becomes second nature to do. But when one forgets (as I sometimes do), the prompting is a big help.
19622124
Reposted by Saskia Hiltemann 🍍
Jay 🦋 @jay.bsky.team · 19/11/2024
Bluesky now has over 20M people!! 🎉 We've been adding over a million users per day for the last few days. To celebrate, here are 20 fun facts about Bluesky:
307013026916060
Saskia Hiltemann 🍍 @shiltemann.bsky.social · 19/11/2024
Teamwork makes the Dream work
140
Reposted by Saskia Hiltemann 🍍
Galaxy Project @galaxyproject.bsky.social · 18/11/2024
The MGnify Amplicon Pipeline v5.0 is now live on Galaxy! With 5 modular sub-workflows, this pipeline gives you the flexibility to analyze microbiome data your way—covering QC, rRNA-prediction, ITS analysis, and more. galaxyproject.org/news/2024-11...
galaxyproject.org
MGnify amplicon pipeline v5.0 on Galaxy
Porting the MGnify Amplicon Pipeline v5.0 to Galaxy: A Collaborative Effort with EBI
044
Reposted by Saskia Hiltemann 🍍
Tal Lavin @swordsjew.bsky.social · 18/11/2024
I made a blocklist for some of the new showing up to troll anti trans folks. No oxygen for these schmoes! bsky.app/profile/did:...
95676422711
Reposted by Saskia Hiltemann 🍍
Galaxy Project @galaxyproject.bsky.social · 17/01/2024
Early bird registration for GCC2024 is now open! Join us in the beautiful city of Brno, Czech Republic, from June 24th to 29th, 2024, for an unforgettable experience of learning, collaboration, and networking. Register and learn more: galaxyproject.org/events/gcc20...
013
Reposted by Saskia Hiltemann 🍍
Galaxy Project @galaxyproject.bsky.social · 13/01/2024
Attending #PAG31? Be sure to stop by Pacific H-I to see a couple of our community members present at the "Teaching Genetics, Genomics, Biotechnology, and Bioinformatics" workshop today starting at 4 PM! -> plan.core-apps.com/pag_2024/eve...
084