Sign in

Danial

@danialgh.bsky.social
105 followers 525 following 12 posts

PharmD student, in love with CS, exploring computational biology, research associate at Neurosnap.ai

PostsRepliesMedia
Danial @danialgh.bsky.social · 05/07/2026
Excited to share our latest paper: Prot2Prop! A parameter-efficient multitask protein language model that jointly predicts six developability properties from sequence using lightweight adapters. 📄 doi.org/10.64898/202... 💻 github.com/NeurosnapInc...
131
Danial @danialgh.bsky.social · 07/07/2025
1/ working on multi-objective protein design made it clear there’s rarely a “best” sequence. improving one property often hurts another.
110
Reposted by Danial
Katherine Brown @katherine-brown.bsky.social · 01/07/2025
Hard to remember that just 12 years ago there was no @biorxivpreprint.bsky.social and almost no one in the biology community preprinted their work. What a long way we’ve come. @reinierprosee.bsky.social and I wrote a thing about how @biologists.bsky.social embraced the preprint world
journals.biologists.com
Staying ahead of the curve: a decade of preprints in biology
When Cold Spring Harbor Laboratory announced the launch of bioRxiv in November 2013, only the braver or more radical amongst us would have predicted that it heralded a lasting change within the scienc...
06621
Danial @danialgh.bsky.social · 10/06/2025
Hi everyone! I’m looking to join academic labs remotely to collaborate and discuss ideas in structural biology, focusing on computational protein design. I have relevant experience and can share details. Please DM me with any opportunities!
000
Danial @danialgh.bsky.social · 07/03/2025
Learn how to cluster proteins by structure with methods like RMSD and TM-score for comparing 3D shapes. My latest post: neurosnap.ai/blog/post/cl... #bioinformatics
neurosnap.ai
Clustering Proteins by Structure — The Ultimate Guide
Explore structural protein clustering with ClusterProt and Kluster tools that classify proteins by their 3D structure. Discover applications in functional prediction, mutation analysis, and protein en...
010
Danial @danialgh.bsky.social · 12/12/2024
Had trouble getting predicted protein structures to work with DSSP and StrucTFactor, so I wrote a simple C program to handle it. If you’re facing the same issue, here’s the code: github.com/Danialgharai...) Hope it’s useful! #MolecularBiology
github.com
GitHub - Danialgharaie/DSSP-Pre: A Simple Program For Making Predicted Protein Structures Compatible With DSSP
A Simple Program For Making Predicted Protein Structures Compatible With DSSP - Danialgharaie/DSSP-Pre
030
Reposted by Danial
Peter Koo @pkoo562.bsky.social · 07/12/2024
0373
Danial @danialgh.bsky.social · 28/11/2024
Had some fun with Boltz!
020
Danial @danialgh.bsky.social · 28/11/2024
🚀 Just published a new blog post on Chai-1: an open alternative to AlphaFold3 for commercial molecular modeling! 🔗 Read more: neurosnap.ai/blog/post/in... #MolecularModeling #Chai1 #AlphaFold3 #DrugDiscovery #Neurosnap #AI #Biotech
neurosnap.ai
Introducing Chai-1: A Commercial Alternative to AlphaFold3
Chai-1 is a powerful molecular structure prediction model, now available through Neurosnap for commercial use. Learn how Chai-1 rivals AlphaFold3 in accuracy while offering more flexible access for re...
030