iiinova — where your digital self keeps evolving

Ben Kellman @bkell1123.bsky.social · 06/05/2025

What is the most appropriate platform for roasting a #bioinformatics colleague? You simply put them on BLAST

Ben Kellman @bkell1123.bsky.social · 12/04/2025

Important work! Generally we either think about specialized glycan binding proteins (lectins) or we don't think about glycans. Canner et al help us see the massive world proteins, 35-40%, that also bind glycans! Thanks Sam for bringing glycan-protein interactions into focus!

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Reposted by Ben Kellman

Richard Ferro, MD MSc @richferro.com · 18/11/2024

#Medsky update: I've added label support to the following feeds: Family Medicine: bsky.app/profile/meds... Cardiology: bsky.app/profile/meds... Int Medicine: bsky.app/profile/meds... Nephrology: bsky.app/profile/meds... Gastro: bsky.app/profile/meds... Rheum: bsky.app/profile/meds...

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Reposted by Ben Kellman

Anshul Kundaje @anshulkundaje.bsky.social · 18/11/2024

Boltz-1: Open source (MIT license) protein + PPI + PLI structure prediction method performs on par with AlphaFold3 by Gabriel Corso, Barzilay et al. & Genesis Therapeutics Blog-post jclinic.mit.edu/boltz-1/ Technical report: t.co/px0spnTA0S Model and code: github.com/jwohlwend/boltz

jclinic.mit.edu

Introducing Boltz-1: Democratizing Biomolecular Interaction Modeling – MIT Jameel Clinic

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Ben Kellman @bkell1123.bsky.social · 18/11/2024

Important numbers to know for the difficult years ahead. Also worth asking if the "next dollar" will yield similar returns. How much more would we need to invest in research to see less than a 250% return?

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Reposted by Ben Kellman

Denis Wirtz @deniswirtz.bsky.social · 16/11/2024

Download our database of 313 different postdoctoral fellowships. For each entry, we provide link to funder, description, amount, deadline, and eligibility criteria (e.g. citizenship). Download our database here: research.jhu.edu/rdt/funding-...

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Ben Kellman @bkell1123.bsky.social · 17/11/2024

Partner and I got an icecream maker. Tldr, we think we can make some weird icecream with a bit of help from glycans! Will share if it's good or weird.

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Ben Kellman @bkell1123.bsky.social · 16/11/2024

Reposting for continuity... I believe we discovered a comprehensive mapping from protein structure to glycan structure, a genetic encoding for specific glycans, and a new paradigm in extracellular biology. www.biorxiv.org/content/10.1...

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Ben Kellman @bkell1123.bsky.social · 16/11/2024

go.bsky.app/CN9pS3u We are home!

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