Sign in

Amy Zamora

@amycrobes.bsky.social
66 followers 82 following 11 posts

phage enthusiast 🦠 microbial marveler 😍 crunchy science gal 🌲🏔️ PhD at @harvardmed

PostsRepliesMedia
Reposted by Amy Zamora
New England Biolabs @nebiolabs.bsky.social · 28/09/2026
Earlier this month, NEB hosted the 2026 Boston Phage Symposium on our Ipswich campus! We are thrilled to have supported a shared interest in phage research and great talks from four labs from MIT and @harvard.edu !
1207
Reposted by Amy Zamora
Vivek Mutalik @vivekmutalik.bsky.social · 19/09/2026
Some of the smallest 😎 viruses on Earth are all around us. Three or four genes 😍 each, in nearly every environment. We keep finding thousands by sequencing, yet don't know who they infect, can't easily isolate them, or even how the few we have infect a cell. Our new preprint takes this on 🧵👇
Schematics of how single strand RNA and DNA phages infect bacteria with F-pilus
513557
Reposted by Amy Zamora
Ákos T Kovács @evolvedbiofilm.bsky.social · 30/08/2026
A phage communication peptide alters Bacillus subtilis colony development and promotes sporulation bioRxiv from @michaelmeijler.bsky.social with @avigdoreldar.bsky.social www.biorxiv.org/content/10.6...
biorxiv.org
A phage communication peptide alters Bacillus subtilis colony development and promotes sporulation
Temperate Bacillus phages use arbitrium peptides to coordinate lysis–lysogeny decisions, but whether the mature communication peptide can be sensed directly by Bacillus subtilis and affect its physiol...
0156
Reposted by Amy Zamora
The Royal Society @royalsociety.org · 27/08/2026
Professor Bonnie Bassler is awarded the Copley Medal for her discovery of the universality of chemical communication in bacteria and for her idea that interfering with this communication could form the basis of novel anti-bacterials. #RSMedals royalsociety.org/medals-and-prizes/…
A woman with dark hair and a light blue shirt smiles at the camera in front of a bright white background.
413836
Reposted by Amy Zamora
Carli Roush @phagephan.bsky.social · 12/08/2026
Thrilled to share my first paper out of grad school. We sequenced dental wastewater (yes, the stuff collected during teeth cleaning) and found previously unknown bacteriophages harbored in the human mouth. #phagesky #microsky 🧵 journals.asm.org/doi/10.1128/...
journals.asm.org
Dental wastewater reveals a hidden reservoir of oral bacteriophage diversity | Microbiology Spectrum
The human oral cavity contains a diverse microbial community, but the bacteriophages (phages) that infect many oral bacteria remain poorly characterized. This gap limits our understanding of how phage...
25718
Reposted by Amy Zamora
Daniel Cazares @danielcazares.bsky.social · 11/05/2026
Happy to share that our latest research on the eco-evolutionary dynamics of MDR plasmids and PDPs is now out (open access vAuthor) in The ISME Journal doi.org/10.1093/isme... Here, we explored how plasmid-dependent phages (PDPs) act as a selective pressure against the spread of multidrug resistance
doi.org
Eco-evolutionary responses to plasmid-dependent phage constrain the spread of multidrug resistance plasmids
Abstract. Phage therapy offers a promising alternative to antibiotics for treating multidrug-resistant infections. Plasmid-dependent phages (PDPs) are part
24426
Reposted by Amy Zamora
George Bouras @gbouras13.bsky.social · 07/08/2026
If you are looking for web-based phage annotation, phage-annotation.org is live. Upload a genome to run Pharokka, Phold and Phynteny sequentially (see our recent protocols paper doi.org/10.1002/cpz1...). If you have feedback, please reach out Thanks to @ardc.edu.au for making this possible!
phage-annotation.org
Phage Annotation Server -- phage genome annotation
Free automated phage genome annotation -- pharokka, phold and phynteny in one pipeline.
46130
Reposted by Amy Zamora
Paul Rainey @paulbrainey.bsky.social · 09/08/2026
Ever wondered how new evolutionary individuals arise? Wanted to engineer communities so the parts integrate to form a new whole? Or impose conditions that cause simple chemistries to become Darwinian? New MS shows how. Psst… don’t tell AI www.biorxiv.org/content/10.6...
biorxiv.org
Forging an evolutionary individual from separate replicators
A central puzzle in the evolution of individuality is the origin of heredity. Egalitarian transitions integrate formerly independent replicators into a higher-level individual, but this requires the c...
04114
Reposted by Amy Zamora
Siân Owen @sianowen.bsky.social · 06/08/2026
Some good new to share: my lab was recently awarded an NIH R35/MIRA award to continue our work on conjugative plasmids and plasmid-dependent phages! 🥳 🫶NIH🫶 www.wadsworth.org/news/nih-gra...
wadsworth.org
NIH grant awarded to Wadsworth Center scientist to advance research on antimicrobial resistance | New York State Department of Health, Wadsworth Center
Dr. Siân Owen, a Principal Investigator and Research Scientist at the Wadsworth Center, has been awarded a highly competitive five-year, $1.97 million Maximizing Investigators' Research Award (MIRA) f...
12916
Reposted by Amy Zamora
Emmanuele Severi @emmseveri.bsky.social · 25/06/2026
#microsky #phagesky Years ago a stray temperate #phage lysogenised an E. coli mutant of mine unable to take in a Sia. The small portion of lysed cells was enough to predigest the Sia into catabolites the cells could take in and use for growth!!! And here I was 1/2 academic.oup.com/ismej/advanc...
academic.oup.com
Bacteriophage-mediated cell lysis externalizes a metabolically valuable nutrient to broadly modulate bacterial communities
Abstract. Cobamides, including vitamin B12, are essential cofactors exchanged between organisms across diverse ecosystems including oceans, soils, and the
1135
Amy Zamora @amycrobes.bsky.social · 25/06/2026
We're excited to share our work on how prophages influence the evolution of resistance against DNA-damaging antibiotics! This has been a fun project with @sianowen.bsky.social, @baym.lol, @theshreyaspai.bsky.social, @kepatitis-c.bsky.social, & @fernpizza.bsky.social biorxiv.org/content/10.6... 1/
biorxiv.org
SOS-mediated prophage induction constrains resistance evolution to DNA-damaging antibiotics
Most naturally occurring bacteria are lysogens, encoding one or more temperate phages (prophages) integrated into their genome. As prophages are induced by the bacterial SOS response, DNA-damaging ant...
15923