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Katrin_Ackermann

@ackermannkatrin.bsky.social
88 followers 119 following 4 posts

Biochemist working in the field of biomolecular EPR spectroscopy. Interested in chronobiology and forensics. Based in Scotland.

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Reposted by Katrin_Ackermann
Nino Wili @ninowili.bsky.social · 10/02/2026
I am looking for PhD students for projects involving photo-excited states, EPR, and NMR. If you're interested or know someone suitable, please let me know! jobs.ethz.ch/job/view/JOP...
jobs.ethz.ch
Doctoral Researcher (PhD) in Magnetic Resonance with Photo-Excited Molecules
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School of Chemistry@St Andrews @st-andrewschem.bsky.social · 25/06/2026
Just published in collaboration with the University of Bonn - Binding Affinity Determines the Success of Endogenous Cu(II)-NTA Spin Labeling for In-Cell Electron Paramagnetic Resonance Distance Measurements doi.org/10.1021/acs....
doi.org
Binding Affinity Determines the Success of Endogenous CuII-NTA Spin Labeling for In-Cell Electron Paramagnetic Resonance Distance Measurements
In-cell electron paramagnetic resonance (EPR) spectroscopy requires robust spin-labeling strategies compatible with cellular conditions. CuII-NTA coordination to genetically engineered double-histidin...
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Angeliki Giannouli @angelikig.bsky.social · 10/06/2026
Our #openaccess work shows that P. fluorescens #Esterase is robust in crowded media and most divalent metals. But Cu²⁺ and Zn²⁺ inhibit activity through aggregation. Insights into enzyme behavior in complex environments. 📖 doi.org/10.1002/cbic... #Biocatalysis #Enzymology
doi.org
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Bela Bode @belab.bsky.social · 05/06/2026
Just published 📜: Binding Affinity Determines the Success of Endogenous CuII-NTA Spin Labeling for In-Cell Electron Paramagnetic Resonance Distance Measurements | The Journal of Physical Chemistry Letters @pubs.acs.org @ackermannkatrin.bsky.social pubs.acs.org/doi/10.1021/... #chemsky 🧪
pubs.acs.org
Binding Affinity Determines the Success of Endogenous CuII-NTA Spin Labeling for In-Cell Electron Paramagnetic Resonance Distance Measurements
In-cell electron paramagnetic resonance (EPR) spectroscopy requires robust spin-labeling strategies compatible with cellular conditions. CuII-NTA coordination to genetically engineered double-histidin...
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Reposted by Katrin_Ackermann
RSC-ESR Group @esr-group.bsky.social · 23/04/2026
Thanks for attending the RSC-ESR group's conference at the University of Essex, organized by Dr Dima Svistunenko. With great talks, posters and the Bruker Lecture by Prof Christiane Timmel, thank you, Sponsors. Next is our 60th Annual Meeting in Manchester! www.esr-group.org/conferences/....
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Angeliki Giannouli @angelikig.bsky.social · 10/04/2026
✨ New paper out in #JACS! We looked at the intrinsically disordered CTD tail of #Hsp90 often seen as a passive linker. Turns out, it’s not. #StructuralBiology #Biophysics #EPR #NMR pubs.acs.org/doi/10.1021/...
pubs.acs.org
Beyond a Passive Tether: Structural Insights into the Disordered Tail of Hsp90
The molecular chaperone Hsp90 is an abundant and essential homodimer that supports the stability and folding of hundreds of client proteins in cells. Its C-terminal domain (CTD) mediates dimerization and serves as a docking site for cochaperones bearing tetratricopeptide repeat (TPR) domains, which recognize the conserved MEEVD motif located at the end of an intrinsically disordered CTD tail. Despite its conservation, the structural role of this tail remains poorly understood. We investigated the conformational behavior of the yeast Hsp90 (yHsp90) CTD tail and its response to the binding of the TPR-containing PPIase cochaperone Cpr6. Using site-directed spin labeling with nitroxide and Gd(III) labels, we examined full-length yHsp90 (FL), isolated CTD (IsoC), and tail-truncated variants by double electron–electron resonance (DEER) and EPR spectroscopy. The CTD tails in IsoC and FL adopted distinct conformational ensembles, attributed to intramolecular interactions with the middle domain in FL. Cpr6 binding abolished these differences, indicating disruption of intramolecular tail contacts. In IsoC, the tail also stabilized an additional CTD conformation near the dimer interface that was absent in FL and was lost upon tail truncation, consistent with tail–CTD interactions observed by NMR. This population was reduced upon Cpr6 binding, shifting the IsoC conformational distribution toward that of FL. Additionally, this population was reduced in cellular environments and mimics. Together, our results demonstrate that the disordered CTD tail is an active structural element that modulates both its own conformational ensemble and CTD architecture, highlighting its potential functional relevance in the Hsp90 chaperone cycle.
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Bela Bode @belab.bsky.social · 22/03/2026
Just published: copper(II) binding to Human Serum Albumin. 1st structure including the ATCUN site that is square planar as expected. There are multiple copper(II) sites and EPR (including hyperfine and pulse dipolar) reveals occupation of multiple sites at low loading. doi.org/10.1039/D6QI...
doi.org
Crystallographic and EPR-based characterisation of Cu2+-binding to serum albumin: ATCUN coordination and additional sites
Copper homeostasis is essential for mammalian physiology. Serum albumin plays an important role in plasma copper transport and buffering, yet its Cu2+ binding sites have remained incompletely characte...
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Bela Bode @belab.bsky.social · 21/03/2026
Work just published in @natcomms.nature.com rdcu.be/e9ieD demonstrating how pulse dipolar EPR can resolve different states of a human transporter in native membranes. EPR contributions by @ackermannkatrin.bsky.social @st-andrewschem.bsky.social
rdcu.be
Swapped and non-swapped TRAAK states co-exist in membranes at a ratio influenced by temperature
Nature Communications - TRAAK is expressed in the nervous system and helps regulate neuronal excitability. Here, the authors use EPR to quantify the relative populations of TRAAK’s swapped...
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Bylines Scotland @bylines.scot · 21/03/2026
Signs you're on Scottish train...
A photo from a train in Scotland of a door saying "Stay out. Bagpipe practice."
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Pliotas Group @pliotasgroup.bsky.social · 21/03/2026
In our study in @natcomms.nature.com we used #EPR #DEER #PELDOR spectroscopy with single subunit heterologous spin labelling and monitored the entire cap conformational ensemble of the human mechanosensitive TRAAK channel and showed it adopts two states in membranes. www.nature.com/articles/s41...
nature.com
Swapped and non-swapped TRAAK states co-exist in membranes at a ratio influenced by temperature - Nature Communications
TRAAK is expressed in the nervous system and helps regulate neuronal excitability. Here, the authors use EPR to quantify the relative populations of TRAAK’s swapped and non-swapped cap states in membr...
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Angeliki Giannouli @angelikig.bsky.social · 21/03/2026
Protein–polymer conjugates: how do we understand their structure & dynamics? 🔬Our new review highlights EPR spectroscopy+complementary techniques for insights in vitro & in cells. Read more 👇 www.sciencedirect.com/science/arti... #ProteinPolymerConjugates #EPR #Biomaterials #PolymerScience
sciencedirect.com
Structural characterization and the role of EPR spectroscopy for protein–polymer conjugates
Protein-polymer conjugates (PPCs) are an important class of therapeutic macromolecules offering improvements in protein stability, circulation time, a…
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Malcolm White @mfwhite2.bsky.social · 22/01/2026
Our latest CRISPR ring nuclease paper focusses on Csx15 - which seems to act as of a sponge as well as a canonical phosphodiesterase. Great work led by @haotianchi.bsky.social www.biorxiv.org/content/10.6...
biorxiv.org
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Bela Bode @belab.bsky.social · 03/12/2025
Officially inducted as Professor of the University of St Andrews today. @uniofstandrews.bsky.social @st-andrewschem.bsky.social This would not have been possible without the contributions co-workers and collaborators past and present. Many thanks to you all.
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Bela Bode @belab.bsky.social · 10/10/2025
Bruker Corporation | Career | EPR Application Scientist (m/f/d) in Ettlingen, Baden-Württemberg | Careers at DE, Ettlingen germancareers-bruker.icims.com/jobs/18525/e...
germancareers-bruker.icims.com
Careers
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School of Chemistry@St Andrews @st-andrewschem.bsky.social · 22/09/2025
Fantastic news! 🎉 Our University is ranked #2 in the UK in both the Guardian University Guide 2026 and Times & Sunday Times Good University Guide 2026. Special congratulations to Chemistry – #1 in the UK (Times) and #2 (Guardian)! 👏👏
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Bela Bode @belab.bsky.social · 03/09/2025
A new paper 📜 with the Piligkos Lab at DTUpublished in ‪@inorgchemfront.rsc.org‬ We show that Chiral molecular 4f qubits retain properties suitable for quantum information processing. Thanks to all involved. ⚛️ 🧪 doi.org/10.1039/D5QI...
doi.org
Chiral molecular 4f qubits by post functionalization
We herein demonstrate the synthesis of a pair of enantiomerically pure YbIII complexes by post-functionalisation of the parent YbIII complex via condensation with an enantiomerically pure chiral amine...
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Angeliki Giannouli @angelikig.bsky.social · 28/08/2025
New paper out in J. Phys. Chem. Lett.: Toward Generalized Solution-State ¹H DNP NMR. BDPA-polystyrene boosts ¹H ~12× in 2s, transfers ~3× to liquids in 6s 🔗 pubs.acs.org/doi/full/10.... #NMR #DNP #Hyperpolarization
pubs.acs.org
Toward Generalized Solution-State 1H DNP NMR via Particle-Mediated Cross-Relaxation
This study discusses a potential route for enhancing 1H NMR signals in the liquid phase at high magnetic fields for samples on the 100 μL volume scale using dynamic nuclear polarization (DNP). The approach involves dispersing an inert powder that is both rich in protons and capable of undergoing DNP with good efficiency at noncryogenic temperatures, and letting the solid 1H polarization thus enhanced pass from the dispersed particles onto the surrounding liquid via spontaneous cross relaxation effects. To this end, BDPA-doped polystyrene (PS) particles in the μm range were suspended in 30 μL of heptane, loaded into 3.2 mm sapphire rotors, and spun at ≈500 Hz for homogeneity purposes in a 14.1 T magnet. Irradiation with ≈13 W at 395 GHz while maintaining temperature in the 185–220 K range thus enhanced the PS proton polarization ≈12-fold within ≈2 s; after ca. 6 s of irradiation, this resulted in ca. 3-fold enhancements of the heptane proton resonances, while preserving their ≤2 Hz line widths. The conditions over which such particle-mediated transfer occurs were explored over a range of sample composition, deuteration and molecular weight; best results were obtained when polarizing a ball-milled powder made of deuterated-PS/PS/BDPA = 86.4/9.6/4.0 suspended on perdeuterated heptane-d16. While the solution-state enhancements provided by this approach are still relatively modest, its generality could open new avenues in DNP-enhanced 1H NMR that do not sacrifice on the volumes, on the high-resolution conditions, or on the multiscan averaging that is customary in contemporary applications.
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Bela Bode @belab.bsky.social · 20/06/2025
🤣 They have never ever got my name correct. If I make up a name they take so long I have forgotten by the time the drink is ready. The only solution is to avoid them altogether...
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Katrin_Ackermann @ackermannkatrin.bsky.social · 08/03/2025
Happy International Women's Day 2025! So happy to have contributed an article in @daltontrans.rsc.org for their Themed Collection: doi.org/10.1039/D4DT... #EPR #ESR @st-andrewschem.bsky.social
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Bela Bode @belab.bsky.social · 26/01/2025
Last paper of 2024. A combination of ENDOR and PELDOR pulse EPR methods to investigate preorganisation and conformational flexibility in a fluoride sensing riboswitch. @st-andrewschem.bsky.social @ackermannkatrin.bsky.social @angewandtechemie.bsky.social
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Bela Bode @belab.bsky.social · 24/01/2025
The 2nd paper of 2025 with some #EPR contribution of us showing a radical in the cyclodipeptide oxidase reaction that is dependent on substrate. doi.org/10.1038/s414... @ackermannkatrin.bsky.social @st-andrewschem.bsky.social
doi.org
Broad substrate scope C-C oxidation in cyclodipeptides catalysed by a flavin-dependent filament - Nature Communications
Cyclodipeptide oxidases are filamentous enzymes. Here, the authors dissect the mechanism of a promiscuous flavoenzyme from the biosynthesis of cyclodipeptide natural products, unveiling fast catalysis...
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Magnetic Resonance News @nmr900.bsky.social · 16/12/2024
the 58th Annual International Meeting of the RSC ESR spectroscopy group at University College London, 1st to 5th June, 2025 www.esr-group.org/conferences/... #NMRchat #NMR #ESR #EPR 🧲
conference poster
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Dr. Jonathan Foley @globalecoguy.bsky.social · 12/12/2024
This cartoon is from 1930. It could have been today.
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Bela Bode @belab.bsky.social · 28/11/2024
Hello world I am an #EPR spectroscopist interested in biophysical chemistry and catalysis. I signed up here some time ago but now I stopped using the other place. I could not bear the landlord anymore.🐦
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Bela Bode @belab.bsky.social · 28/11/2024
@uniofstandrews.bsky.social looking to hire a lecturer in organic chemistry. A fantastic place to work with wonderful students and colleagues. www.jobs.ac.uk/job/DKW116/l... 🧪 ⚗️ #chemsky
jobs.ac.uk
Lecturer in Organic Chemistry - AC2577LS at University of St Andrews
An academic position as a Lecturer in Organic Chemistry - AC2577LS is being advertised on jobs.ac.uk. Click now to find more details and explore additional academic job opportunities.
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David K Smith @professor-dave.bsky.social · 18/11/2024
Chemistry degrees have some of the highest values of any degree and are vital if we want to build a competitive high-tech nation. But they are expensive, and so if universities want to save money quickly they will just ignore national priorities and close them. www.chemistryworld.com/news/univers...
chemistryworld.com
University of Reading proposes closing its chemistry department next year
The university joins several others that are considering the future of their departments and undergraduate programmes
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Katrin_Ackermann @ackermannkatrin.bsky.social · 12/11/2024
Hello Bsky - just migrated here. Little introduction: Biochemist, working on biomolecular applications of #EPR #ESR, senior research fellow in Chemistry at St Andrews University, Scotland. Enjoy things like long walks along the beach and some good food afterwards.
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