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Ziv Aardening

@zivaardening.bsky.social
129 followers 422 following 6 posts

PhD student in the Savaldi-Goldstein lab, studying root development.

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Reposted by Ziv Aardening
Akira Yoshinari @ayoshinari.bsky.social · 22/08/2026
We’re thrilled to announce that our new preprint is now live! In this study, we uncover a previously unrecognized molecular framework underlying radial cell polarity in plants. www.biorxiv.org/content/10.6...
biorxiv.org
The Lateral Protein Cluster as a Key Component of Plant Cell Polarity
Cell polarity is an ancient organizing principle across kingdoms. As in animal epithelial cells, plant cells asymmetrically distribute proteins to establish functionally distinct membrane domains. In ...
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Dolf Weijers @dolfweijers.bsky.social · 18/08/2026
It took some time, but we are thrilled to present the first major outcome of our @erc.europa.eu ERC DIRNDL AdG project: Evgeniya Pukhovaya @epukh.bsky.social and others in our team describe the discovery of a mechanism for polar protein targeting in plants (1/13) www.biorxiv.org/content/10.6...
biorxiv.org
Systematic proteomics identifies a conserved mechanism for polar targeting of plant cortical proteins
Multicellular development is tightly coupled to the polarization of individual cells, which partitions polar proteins along the cell cortex and can control asymmetric cell division, anisotropic growth...
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John Innes Centre @johninnescentre.bsky.social · 08/07/2026
NEWS - Researchers uncover the inside story on plant organ growth 🍃 Research has shed intriguing new light on the genetics underlying the diverse plant organ shapes we see in #agriculture and #nature. www.jic.ac.uk/news/researc...
Close up microscopic image of a plant cell in green and purple hues
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Michael Raissig @michaelraissig.bsky.social · 08/07/2026
🌾 Every grass leaf shares the same repeating short-long cell pattern in its epidermis. Our new #preprint identifies the protein that builds it. 🔬🧬 📄 preprint: www.biorxiv.org/content/10.6... 🧵⬇️ 1/11
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Ziv Aardening @zivaardening.bsky.social · 25/06/2026
www.science.org/doi/10.1126/...
science.org
Brassinosteroid signaling regulates shoot apical meristem homeostasis via orchestrating cytokinin and WUSCHEL activity
BR synergizes with cytokinin to enhance WUS activity for SAM maintenance and prevents SAM arrest by repressing FRUITFUL.
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Sorek Lab @soreklab.bsky.social · 17/06/2026
Preprint: Plant pathogens cleave 2’cADPR to suppress TIR immune signaling Inspired by knowledge on how phages inhibit bacterial immunity, we now show that disease-causing bacteria inhibit plant immunity in a similar way. A 🧵 www.biorxiv.org/content/10.6...
biorxiv.org
Plant pathogens cleave 2'cADPR to suppress TIR immune signaling
Small molecules produced by TIR (Toll-interleukin-1 receptor) domains are essential for plant immune signaling. A central TIR-derived signal is 2'cADPR, a cyclic ADP-ribose (ADPR) molecule that is gen...
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Ziv Aardening @zivaardening.bsky.social · 17/06/2026
Beautiful work demonstrating that inactivating immune signaling molecules is a common theme shared across pathogens of bacteria and plants🌱 Congrats @ohadroth.bsky.social!
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José Dinneny @josedinneny.bsky.social · 02/06/2026
So proud to share our latest publication @CellCellPress! Yue Rui reveals that the same enzyme that makes the wall, cellulose synthase complex (CESA), also tethers the plasma membrane to the wall during water-deficit stress, providing resilience. sciencedirect.com/science/articl…
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Dolf Weijers @dolfweijers.bsky.social · 03/05/2026
We are very happy and proud to present a study led by @jorgehg.bsky.social (now PI in Madrid – keep an eye on him!) in our team @bic-wur.bsky.social. In this work, we discover how auxin-regulated ARF transcription factors learned to activate transcription. A 🧵…(1/17) www.biorxiv.org/content/10.6...
biorxiv.org
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Emmanuelle Bayer @emmanuellebayer.bsky.social · 12/03/2026
PhDs apply to the Cold Spring Harbor Laboratory course Frontiers & Techniques in Plant Science. 1 month of hands-on training with leading experts. A unique opportunity to explore cutting-edge plant science methods and build your network. 🌱 meetings.cshl.edu/courses.aspx...
meetings.cshl.edu
Frontiers & Techniques in Plant Science
Cold Spring Harbor Laboratory Meetings & Courses -- a private, non-profit institution with research programs in cancer, neuroscience, plant biology, genomics, bioinformatics.
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Dolf Weijers @dolfweijers.bsky.social · 03/03/2026
We are very excited to share a new resource from our team: spatial subcellular proteome maps in plants! We developed an MS-based method that registers localizations of about 8000 proteins in Arabidopsis roots in a single experiment. (1/9) www.biorxiv.org/cgi/content/...
biorxiv.org
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Weibing Yang @weibingyang.bsky.social · 06/12/2025
Thrilled to have our paper out in @science.org. Cell division guides plant cell wall formation. Does the reverse hold? We show that bimodal pectin methylesterification, via PME5 mRNA nuclear sequestration, influences plant cell division and cell plate orientation. www.science.org/doi/10.1126/...
science.org
Cell wall patterning regulates plant stem cell dynamics
The plant cell wall regulates development through spatiotemporal modulation of its chemical and mechanical properties. Pectin methylesterification is recognized as a rheological switch controlling wal...
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bioRxiv Plant Bio @biorxiv-plants.bsky.social · 06/11/2025
Nanoclustering of a plant transcription factor enables strong yet specific DNA binding www.biorxiv.org/content/10.1101/202…
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Jenny Russinova @jennyrussinova.bsky.social · 07/11/2025
Another great collaboration with @trevormnolan.bsky.social and @nvukas.bsky.social where we give our vision on how brassinosteroid research can pave the way to precision plant engineering www.science.org/doi/10.1126/...
science.org
Unlocking the potential of brassinosteroids: A path to precision plant engineering
Brassinosteroids are essential plant hormones that play a central role in regulating growth, development, and stress responses. Their impact on plant architecture and productivity makes them attractiv...
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wabniklab.bsky.social @wabniklab.bsky.social · 18/09/2025
Did you know that there is a cell cycle duration gradient in plant root meristem? New story by joining forces between Plant dynamics lab and Crisanto Gutiérrez & Bénédicte Desvoyes lab @cbgpmadrid.bsky.social @cbm-csic-uam.bsky.social #Plants #roots #cellcycle www.nature.com/articles/s41...
nature.com
Stem cell regulators drive a G1 duration gradient during plant root development - Nature Plants
A positional and developmentally regulated cell cycle duration gradient exists in the root meristem whereby the G1 phase is very long close to the stem cell niche. This relies on the interplay of PLET...
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Dolf Weijers @dolfweijers.bsky.social · 05/09/2025
Recently, both our team and the Richardson/Estelle/Strader teams showed that ARF transcription factors are actively degraded. In this new preprint, Martijn de Roij explores the requirements and relevance of ARF degradation (1/7)
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Dolf Weijers @dolfweijers.bsky.social · 01/09/2025
We are happy to present the magnum opus of Sjoerd Woudenberg, at the close of his PhD – Transgenerational inheritance of the polarity axis in a fern embryo…a thread (1/17) tinyurl.com/4y53xekv
tinyurl.com
Transgenerational polarity axis inheritance during Ceratopteris embryogenesis
For sexually reproducing organisms to pass on their genetic information, progeny must successfully establish. Various life history strategies have evolved, using either dispersal of large numbers of p...
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Charlotte Kirchhelle @ckirchhelle.bsky.social · 27/08/2025
Thrilled to share our latest work: how plants control growth through activation of a surface-specific growth programme. Thanks @zoenv.bsky.social, @nathan-german.bsky.social and the other coauthors for all the hard work! www.biorxiv.org/content/10.1...
biorxiv.org
Plant cells at the organ surface use mechanical cues to activate a specific growth control programme
During morphogenesis of multicellular organs, cells acquire distinct identities that meet specific functional requirements. Epidermal identity is widely considered essential for plant morphogenesis du...
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Sandy Hetherington @sandyheth.bsky.social · 20/08/2025
A great example of how comparative genomics across the full range of vascular plant lineages can be used as a catalyst for gene discovery! Exciting new single cell datasets for gymnosperms, ferns and lycophytes! The scale of this study is really amazing! www.cell.com/cell/fulltex...
cell.com
A unified cell atlas of vascular plants reveals cell-type foundational genes and accelerates gene discovery
A cross-species single-cell atlas highlights a core subset of cell-type foundational genes associated with major vascular plant cell types, enabling the identification of hidden cell types and the dev...
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Jorge Hernández-García @jorgehg.bsky.social · 07/08/2025
Hey all! We have been awarded a Spanish national grant to keep researching. Best of all is we have a full PhD contract assigned. We are looking for candidates interested in molecular biology and evolution of (plant) transcription factors, please spread the word!! Check our web for more information.
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José Dinneny @josedinneny.bsky.social · 03/08/2025
Very proud to share our latest preprint: postdoc/LRSF fellow Yue Rui studies the mechanisms regulating attachment of the cell wall to the plasma membrane. The Cellulose Synthase Complex and REMORINs determine the extent of attachment and root osmotic stress tolerance. www.biorxiv.org/content/10.1...
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nikogeldner.bsky.social @nikogeldner.bsky.social · 05/06/2025
Check out our latest work, featuring beautiful, first-of-their-kind cryo-tomograms of crucial plant cell wall modifications, Casparian strips, suberin lamellae, lignified xylem walls and more! From our Electron Microscopy Facility led by @chgenoud.bsky.social www.biorxiv.org/content/10.1...
biorxiv.org
Imaging of specialized plant cell walls by improved cryo-CLEM and cryo-electron tomography
Cryo-focused ion beam scanning electron microscopy (cryo-FIBSEM) has become essential for preparing electron-transparent lamellae from cryo-plunged and high-pressure frozen specimens. However, targeti...
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nikogeldner.bsky.social @nikogeldner.bsky.social · 30/05/2025
We have a unique opportunity for a junior researcher, PhD student or postdoc, to use a revolutionary technique for mineral nutrient imaging and tracing in plants. Please re-post! Interested candidates should apply through the portal at the link below: career5.successfactors.eu/career?compa...
career5.successfactors.eu
Career Opportunities: Postdoc or PhD student position in Plant Physiology (22260)
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Marie-Cécile Caillaud @mc-caillaud.bsky.social · 08/05/2025
🚨Our paper is out! If you ever wonder how four-way junctions are avoided during plant cell division, some answers here 🧬🍀🔬🧪🤓 👇 www.sciencedirect.com/science/arti...
sciencedirect.com
Conserved mechanical hallmark guides four-way junction avoidance during plant cytokinesis
When building an organ, adjacent cells coordinate to form topologically stable junctions by integrating mechanosensitive signaling pathways. Positioni…
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Ziv Aardening @zivaardening.bsky.social · 06/05/2025
Thanks @natplants.nature.com for highlighting the work of our lab’s talented postdoc Hitaishi Khandal, revealing how shoot and root BR signaling shape root system architecture.
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Bipin Pandey @bipinpandey.bsky.social · 01/05/2025
Thrilled to see our work now online @nature.com This study reveals how individual root cells sense and respond to real, compacted soil environments. www.nature.com/articles/s41... beautiful spatial transcritomics of rice root in gel & soil conditions and huge credit to Mingyuan and colleagues.
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Ziv Aardening @zivaardening.bsky.social · 29/04/2025
Root growth and branching are enabled by brassinosteroid-regulated growth anisotropy and carbon allocation www.nature.com/articles/s41...
nature.com
Root growth and branching are enabled by brassinosteroid-regulated growth anisotropy and carbon allocation - Nature Communications
A grafting-based approach combined with modeling uncovers how root system architecture is shaped by the distinct yet essential contributions of the shoot and root through brassinosteroid signaling.
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Teva Vernoux @tevavernoux.bsky.social · 15/04/2025
Scooped by @flowerwhatelse.bsky.social 😅 but if you want to know how auxin can generate a myriad of transcriptional patterns you should check authors.elsevier.com/a/1kxK8L7PXu...
authors.elsevier.com
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Jenny Russinova @jennyrussinova.bsky.social · 24/03/2025
I will be recruiting one PhD student and one postdoc in 2025. If interested please contact me already. @psb-vib.bsky.social 🌱🌱🌱We are interested in steroid hormones. See our published work PMID: 40068682  PMID: 38513023 PMID: 37639582 PMID: 37365405
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Emmanuelle Bayer @emmanuellebayer.bsky.social · 19/03/2025
Plasmodesmata: A new frontier for membrane contact site intercellular communication plantae.org?p=140096
plantae.org
Plasmodesmata: A new frontier for membrane contact site intercellular communication | Plantae
Membrane contact sites (MCSs) serve a critical role in intracellular communication, particularly between organelle membranes, enabling direct molecular transfer. Less clear is the role MCSs play in…
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Jenny Russinova @jennyrussinova.bsky.social · 10/03/2025
🌱 When a root cell undergoes symmetric division, are the daughter cells actually identical? By combining live-cell imaging and scRNAseq we discovered a new cell state with uneven BR activity. Read our full paper in Cell: doi.org/10.1016/j.ce... @nvukas.bsky.social @trevormnolan.bsky.social
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Yohann Boutté @yohannboutte.bsky.social · 25/02/2025
Exited to announce our study on ER-Golgi Intermediate Compartment (ERGIC) in plants!! www.nature.com/articles/s41... Amazing and innovative work from @louisefougere.bsky.social and Magali Grison from @lbm-bordeaux.bsky.social, #SuperResolution, @naturecellbiology.bsky.social
nature.com
ER-to-Golgi trafficking through a dynamic intermediate cis-Golgi tubular network in Arabidopsis - Nature Cell Biology
Fougère, Grison et al. show that the ER–Golgi intermediate compartment (ERGIC) in plants is a tubulo-vesicular network marked by MEMBRIN proteins that is largely Golgi-independent. The plant ERGIC mat...
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Emmanuelle Bayer @emmanuellebayer.bsky.social · 20/02/2025
Great collaboration with @yvonjaillais.bsky.social 🌱 Plants use membrane contact sites (MCS) for cell-to-cell signaling! ➡️ MCTP tethers & PI4P regulate ER-PM contacts in plasmodesmata, impacting trafficking. ➡️ MCS roles span intra- and intercellular communication. www.cell.com/cell/abstrac...
cell.com
Plasmodesmata act as unconventional membrane contact sites regulating intercellular molecular exchange in plants
Plant intercellular communication is regulated via tubular ER-PM membrane contact through PI4P and MCTP protein tethers.
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José Dinneny @josedinneny.bsky.social · 06/02/2025
Proud to share our latest published work on moisture responsive root development-a process we call hydropatterning! We find that this process has been under differential selection during maize breeding and the gaseous hormone ethylene prevents branching in air. www.science.org/doi/epdf/10....
science.org
Moisture-responsive root-branching pathways identified in diverse maize breeding germplasm
Plants grow complex root systems to extract unevenly distributed resources from soils. Spatial differences in soil moisture are perceived by root tips, leading to the patterning of new root branches t...
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Sorek Lab @soreklab.bsky.social · 30/01/2025
Out today @ Science: TIR signaling activates caspase-like immunity in bacteria We report a new immune signaling molecule: N7-cADPR. Produced by phage-induced TIRs and activates a defensive bacterial caspase Congrats Francois Rousset, Ilya Osterman and coauthors! www.science.org/doi/10.1126/...
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Marhavy lab @pmarhavy.bsky.social · 13/01/2025
Thrilled to share our work lead by Di Fino in great collaboration with @Panosmoschou,@Hamann_lab, @GreenMechanobio, @RichardSmithLab published @Dev_Cell: Developmental Cell www.cell.com/developmenta...
cell.com
Cellular damage triggers mechano-chemical control of cell wall dynamics and patterned cell divisions in plant healing
Di Fino et al. analyzed the biomechanical properties of the cell wall in the Arabidopsis root and found that xylem pole pericyclic cell walls are more flexible than outer cell walls. This flexibility ...
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Dolf Weijers @dolfweijers.bsky.social · 30/12/2024
Previously on @biorxivpreprint.bsky.social now online @naturecomms.bsky.social www.nature.com/articles/s41...
nature.com
Evolutionary origins and functional diversification of Auxin Response Factors
Nature Communications - Auxin is a universal regulator of plant growth and development. The authors report the origin and evolutionary history of the key DNA-binding transcription factors mediating...
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Ziv Aardening @zivaardening.bsky.social · 19/11/2024
Now online! The whole and its parts: cell-specific functions of brassinosteroids We review how recent discoveries in the field of brassinosteroid signaling provide new insights into its role in shaping organ growth across cell layers #plantscience www.cell.com/trends/plant...
cell.com
The whole and its parts: cell-specific functions of brassinosteroids
Brassinosteroid (BR) phytohormones operate at both the cellular and organ levels, and impart distinct transcriptional responses in different cell types and developmental zones, with distinct effects o...
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Bert De Rybel @bertderybel.bsky.social · 15/11/2024
In our latest work, we provide molecular insights into the age-dependent morphological changes occurring in the root meristem during phase change. Perseverance over many years by BaoJun Yang and Yanbiao Sun. Generous funding by ERC, FWO, VIB and UGent #plantscience www.science.org/doi/10.1126/...
science.org
SPL13 controls a root apical meristem phase change by triggering oriented cell divisions
Oriented cell divisions are crucial for determining the overall morphology and size of plants, but what controls the onset and duration of this process remains largely unknown. Here, we identified a s...
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