Sign in

We make molecules!

@wemakemolecules.bsky.social
100 followers 126 following 18 posts

The Yeast Natural Products lab, we love fungi and chemistry.

PostsRepliesMedia
Reposted by We make molecules!
Tomas Strucko @tomas-strucko.bsky.social · 07/08/2026
Black yeasts are efficient heterologous hosts for the production of a wide range of fungal polyketides doi.org/10.1038/s415...
doi.org
Black yeasts are efficient heterologous hosts for the production of a wide range of fungal polyketides - Nature Chemical Biology
Here, the authors establish and validate two black yeasts as heterologous hosts for fungal polyketide discovery and production, combining the metabolic robustness of filamentous Aspergillus species wi...
083
Reposted by We make molecules!
Nature Chemical Biology @natchembio.nature.com · 12/08/2026
Black yeasts are efficient heterologous hosts for the production of a wide range of fungal polyketides www.nature.com/articles/s41...
nature.com
Black yeasts are efficient heterologous hosts for the production of a wide range of fungal polyketides - Nature Chemical Biology
Here, the authors establish and validate two black yeasts as heterologous hosts for fungal polyketide discovery and production, combining the metabolic robustness of filamentous Aspergillus species wi...
032
We make molecules! @wemakemolecules.bsky.social · 07/08/2026
Check out this news and views by Tahir Ali and Elizabeth Skellam featuring our research on black yeast hosts for natural products heterologous production. www.nature.com/articles/s41...
nature.com
Black yeasts emerge as hosts for fungal polyketide production - Nature Chemical Biology
Fungal polyketides represent a treasure trove of industrially relevant compounds, yet sustainable high-level production can be challenging. Black yeasts have emerged as promising heterologous hosts fo...
040
We make molecules! @wemakemolecules.bsky.social · 05/08/2026
Fungal natural products Heterologous production: fast, easy, cheap. Introducing BLACK YEASTS 🍄 Fast to engineer, capable of expressing complex fungal biosynthetic pathways, and ready to accelerate natural product discovery. Check the paper 🧪 www.nature.com/articles/s41... #SyntheticBiology #fung
nature.com
Black yeasts are efficient heterologous hosts for the production of a wide range of fungal polyketides - Nature Chemical Biology
Here, the authors establish and validate two black yeasts as heterologous hosts for fungal polyketide discovery and production, combining the metabolic robustness of filamentous Aspergillus species wi...
031
We make molecules! @wemakemolecules.bsky.social · 01/06/2026
Dr. Kevin Yin and the @keaslinglab.bsky.social team engineered polyketide synthases to produce designer polycyclopropanated fuels with improved freezing points and energy density www.nature.com/articles/s41... 🚀🧬 #SyntheticBiology #Biofuels #MetabolicEngineering #AviationFuel
nature.com
Polyketide synthase-based controlled synthesis of polycyclopropanated fuel molecules - Nature Communications
To be practically useful, sustainable aviation fuels need a suitable energy density and freezing point. Here the authors explore an iterative polyketide synthase family, leading to engineered biosynth...
000
Reposted by We make molecules!
Science X / Phys.org @sciencex.bsky.social · 07/05/2026
Genetic analysis of Hypocreales fungi has uncovered thousands of previously unknown natural compounds, highlighting new possibilities for sustainable, eco-friendly crop protection. doi.org/hb2vsw
phys.org
Scientists unlock fungi's secret chemistry, offering a greener path to crop protection
Pesky pests can wreak havoc on plants by chewing leaves, boring into stems, and sucking sap from trees. Beyond the direct damage, they also spread harmful bacteria, viruses, and fungi that can infect and ultimately kill the crops.
053
We make molecules! @wemakemolecules.bsky.social · 28/04/2026
Looking for new biopesticides? or active ingredients for pest control? Check out this research briefing on our recent paper on Hypocreales and their chemistry www.nature.com/articles/s41...
nature.com
Surveying hypocrealean fungi to identify biocontrol agents - Nature Chemical Biology
Hypocrealean fungi are the most important source of fungal and insect pest biocontrol agents. By integrating phylogenomics, metabolomics and synthetic biology, we surveyed the biosynthetic capabilitie...
000
Reposted by We make molecules!
Nature Chemical Biology @natchembio.nature.com · 23/04/2026
Hypocrealean fungi form symbiotic relationships with plants while antagonizing pests. A survey of 5221 of their biosynthetic gene clusters reveals that ~80% encode unknown products, which could have potential for pest control www.nature.com/articles/s41...
nature.com
A biosynthetic survey of hypocrealean biocontrol fungi - Nature Chemical Biology
Crop losses from pests threaten global food security. Here, the authors survey the biosynthetic repertoire of hypocrealean fungi, identifying over 5,200 biosynthetic gene clusters, most encoding unkno...
031
We make molecules! @wemakemolecules.bsky.social · 16/04/2026
We lose up to 40% of crops to pests. Fungal-based crop protection can help. The challenge? We barely know the chemicals fungi use to protect plants. Check out our paper on their biosynthetic potential. Led by Dr Ana Calheiros de Carvalho of YNP Lab + BRIGHT Biofoundry www.nature.com/articles/s41...
nature.com
A biosynthetic survey of hypocrealean biocontrol fungi - Nature Chemical Biology
Crop losses from pests threaten global food security. Here, the authors survey the biosynthetic repertoire of hypocrealean fungi, identifying over 5,200 biosynthetic gene clusters, most encoding unkno...
020
Reposted by We make molecules!
Natural Product Reports @natprodreports.rsc.org · 20/03/2026
🔓Take a look at this #OpenAccess Highlight article from Pablo Cruz-Morales & co. @wemakemolecules.bsky.social discussing synthetic biology for heterologous expression and engineering of fungal polyketide synthases #secmet #natprod 📍 @dtu.dk
pubs.rsc.org
Synthetic biology for heterologous expression and engineering of fungal polyketide synthases
Covering: up to 2025Polyketide synthases (PKSs) are essential enzymatic systems that produce a wide range of natural products. Their biosynthetic features offer significant opportunities to create a…
032
Reposted by We make molecules!
Nature Microbiology @natmicrobiol.nature.com · 18/08/2025
Read the associated news and views: Microbial chocolatiers of fine flavour 🍫 by Pablo Cruz-Morales www.nature.com/articles/s41...
nature.com
Microbial chocolatiers of fine flavour - Nature Microbiology
A comprehensive assessment of biotic and abiotic features of cacao fermentation led to the design of a defined microbial consortium that could reproduce the fine flavour profile of chocolate under con...
0127
We make molecules! @wemakemolecules.bsky.social · 12/05/2025
Climate change is stressing our forests, fungal allies may turn into pathogens. Are we ready for this? Don’t miss this call to action for new model organisms & functional studies in forest pathogens. By Anne Oostlander and col. at TU Braunschweig and FABI nph.onlinelibrary.wiley.com/doi/full/10....
132
We make molecules! @wemakemolecules.bsky.social · 10/03/2025
Our biosynthetic survey of biocontrol fungi is out now! lnkd.in/dJbyis5f Dr. Ana Calheiros de Carvalho combined analytical chemistry, post-genomics and Synbio to catalog and discover lots of natural products. Data release in the next few days: Check our preprint for details ⚗️ 🍄 🥰 🌽
111
We make molecules! @wemakemolecules.bsky.social · 20/02/2025
Our PhD student Adrian Gadar López and the Black Yeast Natural Products team made fungal PKS Heterologous Expression easy! Check out the preprint. www.researchsquare.com/article/rs-6... #wemakemolecules #blackyeast #NNF_BRIGHT
researchsquare.com
Black yeasts are efficient heterologous hosts of a wide range of fungal polyketides
Fungal natural products, including polyketides, are a rich source of bioactive molecules. Their biosynthetic enzymes are encoded within biosynthetic gene clusters, which are often activated by specifi...
043
Reposted by We make molecules!
Thom Booth @thombooth.bsky.social · 22/01/2025
getphylo is finally official! Build phylogenetic trees directly from genbank files - at breakneck speed! I'd like to thank everyone who provided feedback and encourage you to continue. Improving getphylo doesn't stop now the paper is out! 1/5 🧪 bmcbioinformatics.biomedcentral.com/articles/10....
bmcbioinformatics.biomedcentral.com
getphylo: rapid and automatic generation of multi-locus phylogenetic trees - BMC Bioinformatics
Background The increasing amount of genomic data calls for tools that can create genome-scale phylogenies quickly and efficiently. Existing tools rely on large reference databases or require lengthy d...
22813
Reposted by We make molecules!
Tilmann Weber @tilmweber.bsky.social · 15/01/2025
Have a look at our latest study on large-scale #Streptomyces BGC mining / pangenome analysis: genomebiology.biomedcentral.com/articles/10....
genomebiology.biomedcentral.com
Pangenome mining of the Streptomyces genus redefines species’ biosynthetic potential - Genome Biology
Background Streptomyces is a highly diverse genus known for the production of secondary or specialized metabolites with a wide range of applications in the medical and agricultural industries. Several...
1239
We make molecules! @wemakemolecules.bsky.social · 09/01/2025
Feeding 9 billion people will take lots of creativity and the best scientists. Check how Dr. Loes van Dam is working on new fungal foods are DTU biosustain. #DTU_BRIGHT www.euronews.com/health/2025/...
euronews.com
Fungi oysters: Inside the Danish lab producing next alternative food
At a Technical University of Denmark lab, researchers are exploring the potential for fungi to be used as meat and seafood replacements.
023
Reposted by We make molecules!
Tilmann Weber @tilmweber.bsky.social · 07/01/2025
Are you working with #streptomycetes? Then you may be interested in trying our new #StreptoCAD platform: StreptoCAD is an open-source software toolbox automating genome engineering workflows in streptomycetes. www.biorxiv.org/content/10.1...
biorxiv.org
StreptoCAD: An open-source software toolbox automating genome engineering workflows in streptomycetes
Streptomycetes hold immense potential for discovering novel bioactive molecules for applications in medicine or sustainable agriculture. However, high-throughput exploration is hampered by the current...
11913
We make molecules! @wemakemolecules.bsky.social · 07/01/2025
Diplodia sapinea a pine endophyte lives a harmless life until the tree is dying... Climate change is stressing trees and turning harmless fungi into pathogens. How? It is not clear, new tools to study them are needed, check work by Anne Oostlander of TU Braunschweig journals.plos.org/plosone/arti...
journals.plos.org
Development of a molecular genetics and cell biology toolbox for the filamentous fungus Diplodia sapinea
Diplodia sapinea (Fr.) Fuckel is a widespread fungal pathogen affecting conifers worldwide. Infections can lead to severe symptoms, such as shoot blight, canker, tree death, or blue stain in harvested...
031
We make molecules! @wemakemolecules.bsky.social · 07/01/2025
The perfect molecule doesn't exist... Until Dr Ana Calheiros de Carvalho find it with her metabologenomics workflow for biocontrol molecules! Check it out poster #81 #NP2025 San Diego #DTU_BRIGHT
161
We make molecules! @wemakemolecules.bsky.social · 07/01/2025
N.R.P.S. will stand for No Resistant Pest will Stand after Dr Carolina Cano-Prieto engineer them with her SynBio tools. Poster 38 #NP2025 #DTU_BRIGHT #sustainableagriculture
051
We make molecules! @wemakemolecules.bsky.social · 07/01/2025
Saccharomyces Fans are scared of this black yeast! Check out how our PhD student Adrian Gadar-Lopez and his black yeast makes bioproducts like gangbusters. Poster #37 #NP2025 #DTU_BRIGHT #clickbait
083
We make molecules! @wemakemolecules.bsky.social · 07/01/2025
Do you dream of making polyketides advanced materials with polyketide synthases? Check our PhD student Sidharth Jayachandran's poster at #NP2025 San Diego #OMG #DTU_BRIGHT
091
Reposted by We make molecules!
Kai Blin @kblin.bsky.social · 17/12/2024
The #antiSMASH beta is now live on the website. There’s some minor updates and maybe a bug fix out two separating us from what will be in the final release. Please let up know if you run into any bugs. Thanks to all the contributors for getting us past 100 detection rules and all the other updates
1135
Reposted by We make molecules!
bioRxiv Synthetic Biology @biorxiv-synthbio.bsky.social · 20/12/2024
StreptoCAD: An open-source software toolbox automating genome engineering workflows in streptomycetes www.biorxiv.org/content/10.1101/202…
012
Reposted by We make molecules!
Tilmann Weber @tilmweber.bsky.social · 10/12/2024
This time a little different story from our lab @dtu.dk: here we present #ActinoMation, a literate programming workflow to automate #Streptomyces conjugation on Opentron robots. www.biorxiv.org/content/10.1...
biorxiv.org
ActinoMation: a literate programming approach for medium-throughput robotic conjugation of Streptomyces spp.
The genus Streptomyces are valuable producers of antibiotics and other pharmaceutically important bioactive compounds. Advances in molecular engineering tools, such as CRISPR, has provided some access...
1123
We make molecules! @wemakemolecules.bsky.social · 05/12/2024
Check out this fantastic work on how Drosophila comensal bacteria evolved host-specific adhesins to hang to their gut. by Dr. Karina GUTierrez. Of Carnegie @karinagtzga by the power of functional genomics and live imaging! www.science.org/doi/10.1126/... #f
science.org
A conserved bacterial genetic basis for commensal-host specificity
Animals selectively acquire specific symbiotic gut bacteria from their environments that aid host fitness. To colonize, a symbiont must locate its niche and sustain growth within the gut. Adhesins are...
010
We make molecules! @wemakemolecules.bsky.social · 28/11/2024
Today was a great day at YNP, DTU biosustain. we hosted a seminar by Dr. Manu Villalobos our winter guest. He showed us his systems biology tools for filamentous fungi and speed the Trichoderma gospel! #fungi #biocontrol #sustainabity
071