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Sonja Fritzsche

@sonjafritzsche.bsky.social
32 followers 21 following 0 posts

👩‍🔬 PhD Student @CosciaLab.bsky.social @MDC-berlin.bsky.social 🧬 Interested in Cancer and Multiomics 🔬 Combining Multiplex Imaging and Single-Cell Mass Spectrometry

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Reposted by Sonja Fritzsche
Coscia Lab @coscialab.bsky.social · 05/06/2025
Thrilled to share our latest preprint describing an optimized spatial tissue proteomics workflow for the preparation and analysis of >100 proteomes / day at high spatial resolution. Kudos to @melissaklingeberg.bsky.social 🥳 and big thanks to all our collaborators! bit.ly/3SCARw4
bit.ly
An ultrasensitive spatial tissue proteomics workflow exceeding 100 proteomes per day
Achieving high-resolution spatial tissue proteomes requires careful balancing and integration of optimized sample processing, chromatography, and MS acquisition. Here, we present an advanced cellenONE...
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Reposted by Sonja Fritzsche
Coscia Lab @coscialab.bsky.social · 17/07/2025
Excited to introduce openDVP — an open-source framework to bring deep visual proteomics to the broader research community! It includes: – A simplified fast-track pipeline for easy adoption – An AI-powered option for advanced image & spatial analysis 👉 BioRxiv: bit.ly/44SBuHu 👉 Github: bit.ly/4eR3IqK
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Reposted by Sonja Fritzsche
Tancredi M Pentimalli @tmpentimalli.bsky.social · 16/04/2025
www.cell.com/cell-systems... CosMx data by @brukerspatial.bsky.social Second harmonics by Andrew Woehler Immunofluorescence by @sonjafritzsche.bsky.social and @josenimo.bsky.social in Fabian Coscia lab STIM for 3D alignment by @preibischs.bsky.social @nukappa.bsky.social et al (coming very soon!)
cell.com
Combining spatial transcriptomics and ECM imaging in 3D for mapping cellular interactions in the tumor microenvironment
Pentimalli et al. extend imaging-based spatial transcriptomics to 3D and combine it with ECM profiling. The multimodal analysis of cellular neighborhoods in a clinical lung adenocarcinoma sample revea...
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Reposted by Sonja Fritzsche
Coscia Lab @coscialab.bsky.social · 20/03/2025
Our lab's newest preprint is out on deep spatial proteomics of ovarian cancer precursor lesions! We demonstrate how ultrasensitive discovery proteomics can shed light onto early carcinogenesis, uncover cell-of-origin signatures, and prioritize novel drug targets. bit.ly/41M7fke
biorxiv.org
Deep spatial proteomics of ovarian cancer precursor lesions delineates early disease changes and cell-of-origin signatures
High-grade serous ovarian cancer (HGSOC) is a devastating disease that is frequently detected at an advanced and incurable stage. Advances in ultrasensitive mass spectrometry-based spatial proteomics ...
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