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silargi.bsky.social

@silargi.bsky.social
360 followers 233 following 11 posts

Here for pathogen genomic surveillance and AMR. Won't turn away cute animal videos.

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European Centre for Disease Prevention and Control @ecdc.europa.eu · 20/07/2026
Early detection is key to responding effectively to respiratory virus threats. We have just published new 𝗴𝘂𝗶𝗱𝗮𝗻𝗰𝗲 𝗼𝗻 𝗶𝗻𝘁𝗲𝗴𝗿𝗮𝘁𝗲𝗱 𝗿𝗲𝘀𝗽𝗶𝗿𝗮𝘁𝗼𝗿𝘆 𝘃𝗶𝗿𝘂𝘀 𝘀𝘂𝗿𝘃𝗲𝗶𝗹𝗹𝗮𝗻𝗰𝗲 to help countries across Europe detect changes in virus circulation earlier and build a 𝗰𝗹𝗲𝗮𝗿𝗲𝗿 𝗽𝗶𝗰𝘁𝘂𝗿𝗲 𝗼𝗳 𝗿𝗲𝘀𝗽𝗶𝗿𝗮𝘁𝗼𝗿𝘆 𝗱𝗶𝘀𝗲𝗮𝘀𝗲 𝘁𝗿𝗲𝗻𝗱𝘀.
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Kit Yates @kityates.bsky.social · 18/06/2026
What an amazing story.❤️
bbc.co.uk
Cervical cancer deaths fall to zero in young women given HPV vaccine
A new study finds that hundreds of lives have been saved since school-age girls were offered the HPV jab in 2008.
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ARTIC network @artic.network · 01/06/2026
ARTIC network has published Bundibugyo (BDBV) sequencing resources as the 2026 outbreak continues in DRC & Uganda. We have compiled guidance for labs wishing to sequence, assemble and analyse BDBV genomes: artic.network/viruses/bdbv/bdbv-sequencing-guide.html
artic.network
Bundibugyo virus genomic sequencing resources | ARTIC network - pathogen genomics from sample to response
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African Bioinformatics Institute @abinstitute.bsky.social · 13/05/2026
Applications are open for the October 2026 Omics Codeathon, hosted virtually by ASBCB. Free and open to researchers, biologists, data scientists, and coders, including those newer to bioinformatics. 20 to 31 Oct 2026. Apply by 29 May. Apply Here 👇️ docs.google.com/forms/d/1YkP...
docs.google.com
Omics Codeathon General Application - October 2026
The African Society for Bioinformatics and Computational Biology with support from the National Institutes of Health Office of Data Science Strategy and other organizations is pleased to announce a…
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UK Health Security Agency @ukhsa.bsky.social · 24/04/2026
📰 The UK's largest ever real-world study into RSV vaccination has confirmed that babies born to vaccinated mothers are up to 85% less likely to end up in hospital with an RSV chest infection. Thanks to all the NHS health professionals who deliver this vital programme 👏
Woman holding a baby close against her shoulder. Text states that the maternal RSV vaccine can reduce baby hospital admissions by up to 85%, based on a large real‑world study in EnglandBaby sleeping on their side next to a soft toy. Text explains this is the largest study of maternal RSV vaccination, covering 90% of births in England between September 2024 and March 2025Adult gently kissing a baby’s cheek in an outdoor setting. Text explains that babies born to mothers vaccinated against RSV during pregnancy were up to 85% less likely to be hospitalised with an RSV chest infection, especially when born at least four weeks after vaccination.Close-up of a baby sleeping in a hospital cot. Text highlights research showing high protection for premature babies when there is at least a two‑week gap between maternal vaccination and birth
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Elisabeth Bik @elisabethbik.bsky.social · 24/04/2026
Back at Day 2 of the @nationalacademies.org Workshop on Enhancing Scientific Integrity. We start with @urisohn.bsky.social who will talk about the Wharton Credibility Lab, which launched AsCollected, to document how, where, and when data were collected. credlab.wharton.upenn.edu
Screenshot of the speaker with his name in the bottom.
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silargi.bsky.social @silargi.bsky.social · 17/04/2026
📣 Applications are now open! Thrilled to share that the IPSN Catalytic Grant Fund is now accepting applications for their second round of funding, supporting the scale-up of #genomics innovation and capacity-building in LMICs. 👉 Find out how to apply: bit.ly/WHOIPSNfunding
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African Bioinformatics Institute @abinstitute.bsky.social · 10/04/2026
ABI is calling for nominations for its Interim Governing Board, our highest decision making authority. We are looking for senior leaders from across Africa and African scientists working internationally. Nominate here: redcap.h3abionet.org/redcap/surveys/?s=3YMYTMR3HELCNW37 #AfricanScience #ABI
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silargi.bsky.social @silargi.bsky.social · 02/02/2026
Now with new and improved flavour! Great to see that it generates the blast comparison between two genomes in-app.
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Alan McNally @alanmcn1.bsky.social · 17/12/2025
AI folks now having to realise what GWAS folks did about studying bacterial genome datasets. Great work by great researchers
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silargi.bsky.social @silargi.bsky.social · 18/11/2025
Please join us for the @who.int EPI-WIN webinar introducing WHO’s report on Attributes and Principles of Pathogen Genomic Data-Sharing Platforms. 24 November 2025, 1-2pm CET. 🔗 Register: who.zoom.us/webinar/regi... 👉 Webinar info: www.who.int/news-room/ev... 📄 Report: iris.who.int/bitstreams/f...
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pha4ge.bsky.social @pha4ge.bsky.social · 01/10/2025
Join us for the #PHA4GECon2025 & #IPSNGPF2025 hosted by IPSN, @afro.who.int and @pha4ge.bsky.social. Join our expert panel on October 27, 2025, as they tackle key genomics data challenges shaping global surveillance. Collaborate, share insights, and drive public health innovation.
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Eva Heinz @evaheinz7.bsky.social · 22/07/2025
Now with updated invited speakers; please take a look & consider putting in an abstract if of interest! Giving an opportunity to the eukaryotic side of microbial genomics to shine 😊Sept 12, Glasgow, 1-day conference. #MicroSky #protistsonsky #protists #fungi microbiologysociety.org/event/full-e...
microbiologysociety.org
Microbial Genomics of Eukaryotes
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Centre for Genomic Pathogen Surveillance @thecgps.bsky.social · 22/04/2025
Our latest preprint is out describing amr.watch - a platform for monitoring AMR trends from global genomics data: www.biorxiv.org/content/10.1... (1/6)
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Tim Dallman @tdallman.bsky.social · 16/04/2025
Reminder to join the latest @who.int IPSN EPI-WIN webinar on current and future perspectives of genomic surveillance of mpox - today @ 13:00 CET
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WHO @who.int · 16/04/2025
After over 3 years of negotiations, WHO Member States have finalized a draft #PandemicAccord to make the world safer from future pandemics. The draft agreement will now be submitted to WHO’s Member States meeting at the #WHA78 for consideration and adoption. bit.ly/3EaZQmL
Participants in the discussions are holding up their country names.
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Torsten Seemann @torstenseemann.bsky.social · 04/03/2025
🦘✂️ Thanks to @cziscience.bsky.social , @wytamma.bsky.social and I are writing the next version of the Snippy bacterial variant calling pipeline. We want your input on what features s it will have. Please fill out this (longish) survey to help make Snippy great again! forms.gle/YJP6WQjsk8KK...
forms.gle
Snippy: Microbial Variant Calling Community Survey
Help us drive the next wave of innovation in Single-Nucleotide Polymorphism (SNP) discovery and genome analysis by sharing your valuable experiences and insights. This in-depth survey aims at understa...
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Nature @nature.com · 03/03/2025
Nature research paper: Clonal Candida auris and ESKAPE pathogens on the skin of residents of nursing homes go.nature.com/4igrfC1
go.nature.com
Clonal Candida auris and ESKAPE pathogens on the skin of residents of nursing homes - Nature
Analyses of strain-resolved metagenomics with isolate sequencing data of skin samples from residents at nursing homes suggest that skin is a reservoir for Candida auris and other multidrug-resistant bacterial species.
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silargi.bsky.social @silargi.bsky.social · 05/02/2025
📣 There is one week left to participate in WHO's online consultation on the critical features of pathogen genomic data-sharing platforms to meet public health needs. Thank you to all those who have already submitted their feedback.
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silargi.bsky.social @silargi.bsky.social · 17/01/2025
Does your team deposit and access pathogen genomic data via data-sharing platforms for public health use? Participate in WHO's online consultation on the critical features of pathogen genomic data-sharing platforms to meet public health needs. All info here: www.who.int/news-room/ar...
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TARGetAMR @target-amr.bsky.social · 14/01/2025
🚀✨ 10 DAYS TO GO! ✨🚀 The countdown is ON for the first webinar of the TARGetAMR Monthly Webinar Series, and you don’t want to miss this! 🎉 📅 Mark your calendars – it’s happening soon! 👇 Sign up now before it’s too late: www.targetamr.org.uk/hdrevents/ja... #Countdown #LaunchWebinar #RegisterNow
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TARGetAMR @target-amr.bsky.social · 08/01/2025
🔥 Webinar Series Launch! 🔥 ‘#Genomics and Beyond: A Holistic Approach to Tackling #AMR in East Africa’ 🌍 Don't miss Prof. Matthew Holden #StAndMedicine sharing his expertise. Register Now www.targetamr.org.uk/hdrevents/ja...
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silargi.bsky.social @silargi.bsky.social · 11/09/2024
Predict antimicrobial resistance, master data-sharing, and enhance your expertise in AMR genomics using cutting-edge databases through this FREE online course starting on September 30th www.futurelearn.com/courses/anti...
futurelearn.com
Mastering Genotype Predictions and Open Data - Online Course - FutureLearn
Transform your understanding of antimicrobial resistance (AMR) and elevate your research or clinical practice with Wellcome Connecting Science.
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ARTIC network @artic.network · 23/08/2024
Watch this space! ARTIC tools & resources for #mpox sequencing and analysis coming very soon! #wellcometrust #nanopore #illumina #molecularepidemiology #pathogen #pathogensurviellance #bioinformatics #epidemiology #virus #outbreak #clinicalvirology #sequencing
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Tim Dallman @tdallman.bsky.social · 22/08/2024
Please join us to hear how genomics is helping in response to the multiple outbreaks of Dengue from the @who hosted International Pathogen Surveillance Network. Register here: echo.zoom.us/webinar/regi...
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Paul Hoskisson 🧫 🦠🐸 @paulhoskisson.bsky.social · 11/03/2024
Está abierta la convocatoria para que investigadores jóvenes nos acompañen en la 2nd Minería genómica de productos naturales de Latinoamérica - Applications are now open for #ECRs to join us at the 2nd Genome mining of natural products, Latin America 2024 -please use QR code #Microsky
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Kat Holt @katholt.bsky.social · 28/02/2024
JOB ALERT! Come work with me at LSHTM to investigate transmission of Klebsiella pneumoniae in neonatal units in Africa using bioinformatics and genomic epi. Great team, Gates funded, £44-50k/yr, 1-year postdoc to start with possibilities to extend. Closing March 26. jobs.lshtm.ac.uk/vacancy.aspx...
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silargi.bsky.social @silargi.bsky.social · 26/02/2024
The International Pathogen Surveillance Network launches catalytic grant fund for pathogen genomics. Grants between US$50,000 and US$250,000 are available for IPSN members from low- and middle-income countries (and consortia) www.who.int/news/item/23...
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