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Centre for Genomic Pathogen Surveillance @thecgps.bsky.social · 05/03/2026

Last session pushed beyond bacteria. Azole-resistant Aspergillus linked to agricultural fungicides. C. auris likely accelerated by climate change. Almost no global capacity for fungal genomic surveillance. AMR is bigger than bacteria. www.amrsurveillance.org #AMRSurveillanceAddis

amrsurveillance.org

AMR Convening on Building Sustainable AMR Genomic Surveillance

A focused convening to identify practical pathways for strengthening routine national AMR surveillance systems, including the integration of genomic data.

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Centre for Genomic Pathogen Surveillance @thecgps.bsky.social · 05/03/2026

Four national stories. Philippines: 38 years of AMR surveillance, now adding WGS. Uganda: 16 to 43 sites. Pakistan: building a genomic strategy. Brazil: mapping labs nationally. Start small, invest in quality, build government ownership. #AMRSurveillanceAddis Day 1 of www.amrsurveillance.org

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Centre for Genomic Pathogen Surveillance @thecgps.bsky.social · 05/03/2026

Sentinel site session was the most grounding. Surveillance fails when it's extractive — data goes up, nothing comes back. Labs engage when it improves their own practice. www.amrsurveillance.org #AMRSurveillanceAddis

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Centre for Genomic Pathogen Surveillance @thecgps.bsky.social · 05/03/2026

Reporting from the AMR Surveillance Convening at Africa CDC, Addis Ababa. Opening message was direct: the surveillance gap isn't about knowledge anymore, it's delivery and financing. Africa carries ~21% of the global AMR burden. Recap of Day 1 from www.amrsurveillance.org #AMRSurveillanceAddis

amrsurveillance.org

AMR Convening on Building Sustainable AMR Genomic Surveillance

A focused convening to identify practical pathways for strengthening routine national AMR surveillance systems, including the integration of genomic data.

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Centre for Genomic Pathogen Surveillance @thecgps.bsky.social · 02/03/2026

109 participants from 52 countries are convening at Africa CDC Headquarters in Addis Ababa for a focused, experience-led meeting on strengthening routine national antimicrobial resistance (AMR) surveillance systems, including the integration of pathogen genomic data. More at www.amrsurveillance.org

amrsurveillance.org

AMR Convening on Building Sustainable AMR Genomic Surveillance

A focused convening to identify practical pathways for strengthening routine national AMR surveillance systems, including the integration of genomic data.

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Centre for Genomic Pathogen Surveillance @thecgps.bsky.social · 19/06/2025

Pleased to share our latest preprint describing vaccines.watch (vaccines.watch), an interactive platform enabling exploration of vaccine target diversity from global genome data: www.biorxiv.org/content/10.1...

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Centre for Genomic Pathogen Surveillance @thecgps.bsky.social · 12/06/2025

We’re pleased to share two new preprints with results from a structured survey of carbapenem- and/or colistin-resistant Enterobacterales (CCRE), conducted in 37 European countries in 2019. E. coli: papers.ssrn.com/sol3/papers.... K. pneumoniae: papers.ssrn.com/sol3/papers....

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Centre for Genomic Pathogen Surveillance @thecgps.bsky.social · 22/04/2025

Our latest preprint is out describing amr.watch - a platform for monitoring AMR trends from global genomics data: www.biorxiv.org/content/10.1... (1/6)

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Reposted by Centre for Genomic Pathogen Surveillance

Pathogenwatch @pathogenwatch.bsky.social · 12/02/2025

We’ve just released a public Pathogenwatch collection of the MRSN Diversity Panel comprising 100 diverse K. pneumoniae clinical isolates: pathogen.watch/collection/8... #KlebClub

pathogen.watch

Pathogenwatch

A global platform for genomic surveillance.

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Reposted by Centre for Genomic Pathogen Surveillance

Pathogenwatch @pathogenwatch.bsky.social · 12/02/2025

Hi Bluesky! We’re looking forward to engaging with the community and our users on here. Follow this account for updates on the Pathogenwatch platform (pathogen.watch), as well as our sister tools @microreact.bsky.social and @amrwatch.bsky.social developed by @thecgps.bsky.social

pathogen.watch

Pathogenwatch

A global platform for genomic surveillance.

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