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Santiago Marco-Sola

@santiagomarco.bsky.social
80 followers 104 following 4 posts

Research scientist. I like algorithms, bioinformatics, computer science, and HPC.

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Reposted by Santiago Marco-Sola
Andrea Guarracino @andreaguarracino.bsky.social · 19/02/2026
If you're running out of space on your cluster every day, check this out. Make data small again!
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Reposted by Santiago Marco-Sola
Stephen Turner @stephenturner.us · 14/02/2026
Theseus: Fast and Optimal Affine-Gap Sequence-to-Graph Alignment www.biorxiv.org/content/10.6... 🧬💻🧪 github.com/albertjimene...
biorxiv.org
Theseus: Fast and Optimal Affine-Gap Sequence-to-Graph Alignment
Motivation: Sequence-to-graph alignment is a central problem in bioinformatics, with applications in multiple sequence alignment (MSA) and pangenome analysis, among others. However, current algorithms...
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Reposted by Santiago Marco-Sola
Andrea Guarracino @andreaguarracino.bsky.social · 06/02/2026
Looking for a postdoc to build my new lab at TGen (Phoenix, AZ) focused on pangenome methods for cancer and complex disease. Full stack — from pangenome assembly and compression to association studies and somatic variant discovery. Reach out if interested! guarracinolab.github.io#join
guarracinolab.github.io
Guarracino Lab | Pangenome Research
We develop methods to build and analyze pangenomes, with applications in cancer and complex disease. Translational Genomics Research Institute, Phoenix, AZ.
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Santiago Marco-Sola @santiagomarco.bsky.social · 11/01/2026
Wow! Congratulations, @franmj88.bsky.social !! Well deserved. So nice to see you thrive in your career. Hope you the best on this promising adventure!
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Reposted by Santiago Marco-Sola
bioRxiv Bioinfo @biorxiv-bioinfo.bsky.social · 03/11/2025
Singletrack: An Algorithm for Improving Memory Consumption and Performance of Gap-Affine Sequence Alignment www.biorxiv.org/content/10.1101/202…
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