Author summary Noma is a rapidly progressing necrotic disease that destroys the tissues of the mouth and face, mainly affecting children living in abject poverty. Although antibiotic treatment can be ...

The future This is probably the last release of Prokka. I won't be making any code changes except bug fixes. I will update the databases occasionally. I strongly recommend you use Bakta by @oschwen...

Genomic comparison of E. coli and K. pneumoniae isolated from faeces and blood of the same neonatal patients revealed highly related pairs, suggesting translocation between the gastrointestinal tract ...

Genomic comparison of E. coli and K. pneumoniae isolated from faeces and blood of the same neonatal patients revealed highly related pairs, suggesting translocation between the gastrointestinal tract ...

Blood stream infections (BSIs) are a major cause of hospitalisation and death for children under the age of five in sub-Saharan Africa with members of the Gram-negative bacteria Enterobacterales such ...

The transfer of antimicrobial resistance genes (ARGs) from environmental microbes to pathogens is a critical but underexplored One Health driver of antimicrobial resistance (AMR). Here, we evaluate fr...

A tool for generating consensus long-read assemblies for bacterial genomes - rrwick/Autocycler

In this work, authors probe the molecular mechanism of re-emerging CHL susceptibility in Malawian Enterobacterales isolates, where they identify a stable truncation of resistance genes by insertion se...