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Ian Webb

@profianwebb.bsky.social
91 followers 73 following 10 posts

Associate Professor of Chemistry and Chemical Biology at Indiana University Indianapolis. Research in fundamental and applied biophysical mass spectrometry.

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Ian Webb @profianwebb.bsky.social · 03/09/2025
We are hiring at all levels for a tenure/tenure track position in molecular omics, broadly defined. Come be my colleague! indiana.peopleadmin.com/postings/30467
indiana.peopleadmin.com
Assistant, Associate/Full Professor
Full, Associate, or Assistant ProfessorIndiana University Indianapolis School of ScienceThe School of Science (SoS) at Indiana University Indianapolis (IU Indianapolis) and newly established IU Conver...
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Ian Webb @profianwebb.bsky.social · 14/07/2025
Advancing Mass Spectrometry for Biophysics and Structural Biology 2025 starts Sunday at Georgia Tech! We will have four posters and one “Hot Topic” talk from the group. Can’t wait!
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Michael Marty @michaelmarty.bsky.social · 14/05/2025
Two new IsoDec tutorial videos to go over top-down proteomics searching with a few different workflows, one with TopPIC and the other with MetaMorpheus @metamorpheus.bsky.social : youtu.be/OTQbplEezLQ and youtu.be/56OZJph48BU
youtu.be
IsoDec Tutorial 2: Analyzing LC-MS in the UniDec GUI with TopPIC search
YouTube video by Michael T Marty
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Gabe Nagy @g-nagy.bsky.social · 26/04/2025
Check out our latest work on Determining β-Monosaccharide Head Group Composition with High-Resolution Cyclic Ion Mobility Separations Coupled to Tandem Mass Spectrometry as a First Step for Unknown Cerebroside Analysis! www.sciencedirect.com/science/arti...
sciencedirect.com
Determining β-Monosaccharide Head Group Composition with High-Resolution Cyclic Ion Mobility Separations Coupled to Tandem Mass Spectrometry as a First Step for Unknown Cerebroside Analysis
Cerebrosides, a class of biologically important lipids, are comprised of a monosaccharide head group along with their ceramide tail. However, their ac…
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Ian Webb @profianwebb.bsky.social · 11/04/2025
New paper from our group! pubs.acs.org/doi/10.1021/...
pubs.acs.org
Strategies for Acid and Amine Cross-linking and Labeling for Protein Structural Characterization Using Mass Spectrometry
Cross-linking and covalent labeling are common tools for protein structural elucidation by mass spectrometry. However, despite the importance of electrostatic interactions in proteins, there are not m...
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Julia Laskin Lab @lablaskin.bsky.social · 27/03/2025
Check out the latest editorial article in #IJMS, highlighting two exciting perspective articles by Ian Webb and Ahmed Hamid in the Young Scientist Feature collection.
authors.elsevier.com
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Chouinard Lab @chouinardlab.bsky.social · 17/03/2025
Congrats to Heidi on her first-author paper using high-resolution ion mobility and tandem mass spectrometry to differentiate challenging PFAS branched chain isomers. #TeamMassSpec
pubs.acs.org
Multidimensional Separations for Characterization of Isomeric PFAS Using SLIM High-Resolution Ion Mobility and Tandem Mass Spectrometry
Per- and polyfluoroalkyl substances (PFAS) are synthetic organofluorine compounds that accumulate in the environment due to significant industrial use and resistance to degradation. PFAS are of global interest because of their environmental and health concerns. They exist in a variety of linear and nonlinear forms containing a variety of isomers, as well as differing functional headgroups for each class. That structural complexity requires advanced analytical techniques, beyond current high-resolution mass spectrometry (HRMS) methods, for their accurate identification and quantification in a wide range of samples. Herein, we demonstrate the power of Structures for Lossless Ion Manipulations (SLIM)-based high-resolution ion mobility (HRIM) for separation of complex PFAS branched isomers. SLIM is integrated into a multidimensional LC-SLIM IM-MS/MS workflow, developed for the extensive characterization of a wide range of PFAS compounds. As we surveyed sulfonate and carboxylic acid classes of PFAS, we observed unique arrival time vs m/z trend lines that were representative of each class; these trend lines are important for allowing identification of emerging species based on their placement in that two-dimensional space. Next, we used complementary tandem mass spectrometry (MS/MS) approaches with all ion fragmentation (AIF), as well as energy-resolved MS/MS, to further investigate the structure of mobility-separated species. This allowed both investigation of fragmentation mechanism and identification of unique fragment ions that could allow differentiation of isomers when ion mobility was insufficient. Overall, the combination of chromatography, high-resolution SLIM, and MS/MS provided a comprehensive workflow capable of identifying unknown emerging PFAS compounds in complex environmental samples.
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Chouinard Lab @chouinardlab.bsky.social · 19/03/2025
Recent article from Ralph Aderorho in Drug Testing and Analysis was recognized as one of the top 10 most-cited papers published in 2023! #TopCitedArticle
analyticalsciencejournals.onlinelibrary.wiley.com
Improved separation of fentanyl isomers using metal cation adducts and high‐resolution ion mobility‐mass spectrometry
Fentanyl has become a growing concern as a deadly drug of abuse. In this work, we use a novel ion mobility–mass spectrometry (IM-MS) approach with metal cation adducts and high-resolution demultiplex...
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Varun Gadkari @varun-gadkari.bsky.social · 14/03/2025
What a great end to spring break! The Gadkari Research Group’s first article is live on @pubs.acs.org Analytical Chemistry. Learn about how gas phase unfolding via surface induced dissociation can contribute useful information to your native mass spectrometry studies! pubs.acs.org/doi/10.1021/...
pubs.acs.org
Surface-Induced Unfolding Reveals Unique Structural Features and Enhances Machine Learning Classification Models
Native ion mobility-mass spectrometry combined with collision-induced unfolding (CIU) is a powerful analytical method for protein characterization, offering insights into structural stability and enab...
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Gabe Nagy @g-nagy.bsky.social · 03/03/2025
Very excited to announce that our lab was awarded the NSF CAREER to continue our efforts in studying isotopic shifts in ion mobility separations!
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Gabe Nagy @g-nagy.bsky.social · 26/02/2025
Check out our latest paper on two-dimensional isotopic shifts for steroid isomer delineation with high-resolution cyclic ion mobility separations! link.springer.com/article/10.1...
link.springer.com
Two-dimensional isotopic shifts for steroid isomer delineation with high-resolution cyclic ion mobility separations - Analytical and Bioanalytical Chemistry
Recently, the use of mass distribution–based isotopic shifts in high-resolution ion mobility spectrometry-mass spectrometry–based separations have enabled isomer delineation by measuring the relative ...
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Ian Webb @profianwebb.bsky.social · 27/02/2025
www.biorxiv.org/content/10.1... New preprint from our group that finds evidence of allosteric regulation of alpha synuclein via phosphorylation confirming a hypothesis from www.sciencedirect.com/science/arti...
biorxiv.org
Experimental Evidence for Phosphorylation-Driven Allosteric Regulation of Alpha Synuclein Function
Phosphorylation of serine 129 (pS129) in the intrinsically disordered protein alpha synuclein has long been associated with neurodegenerative disease. In the past several years, the functional relevan...
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Ian Webb @profianwebb.bsky.social · 23/02/2025
““Blessed is the man who trusts in the Lord, whose trust is the Lord. He is like a tree planted by water, that sends out its roots by the stream, and does not fear when heat comes, for its leaves remain green, and is not anxious in the year of drought, for it does not cease to bear fruit.””
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Ian Webb @profianwebb.bsky.social · 12/02/2025
New Webb Lab paper from Kacy Black about developing ion/ion reagents for protein higher order structure studies. pubs.acs.org/doi/full/10....
pubs.acs.org
Development of Electrostatic-to-Covalent Gas Phase Cross-linkers for Protein Structure Measurements by Mass Spectrometry
The benefits of native mass spectrometry have led to the extensive study of proteins inside mass spectrometers in the gas phase. The expansion of native mass spectrometry requires novel tools for gai...
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Ian Webb @profianwebb.bsky.social · 10/02/2025
Any #TeamMassSpec going to be at the Biophysical Society Meeting? I’ll have a poster in the IDP section on Sunday.
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Ian Webb @profianwebb.bsky.social · 22/01/2025
From XKCD
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Varun Gadkari @varun-gadkari.bsky.social · 20/01/2025
Preprint of our first research article is live! Are you curious about: How surface induced unfolding can benefit your research? Reproducibility of gas phase unfolding measurements? Rowan Matney has worked hard to answer these questions, and more! #TeamMassSpec #Preprint doi.org/10.26434/che...
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Ian Webb @profianwebb.bsky.social · 14/01/2025
New (to our group) mass spec day!
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Itai Yanai @itaiyanai.bsky.social · 18/11/2024
Is basic science undervalued? David Glanzman (UCLA) talks about the decline of 'middle class' labs and that "there is no empirical evidence that the translational approach accomplishes this [cures] any better than the traditional one. Claims to the contrary at this point are mere propaganda."
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Ian Webb @profianwebb.bsky.social · 11/01/2025
RIP Professor March x.com/profianwebb/...
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Bush Lab @bushlab.bsky.social · 09/01/2025
Final conference dates, registration, and housing are now available for Advancing Mass Spectrometry for Biophysics and Structural Biology. We look forward to seeing everyone in Atlanta! #teammassspec advancingms.org
advancingms.org
Advancing Mass Spectrometry
Advancing Mass Spectrometry for Biophysics and Structural Biology
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