Reposted by Alberto Perezacscomp.bsky.social @acscomp.bsky.social · 22/07/2025Mark your calendars for the ACS COMP *SUNDAY* Social on August 17, 2025! Free German 🥨&🍻 for COMP members, sponsored by OpenEye + Cadence 💻 RSVP link dropping soon in all ACS COMP members' email inboxes :) 031
Reposted by Alberto PerezPedro Beltrao @pedrobeltrao.bsky.social · 22/07/2025Unexpectedly, @jurgjn.bsky.social found that running Alphafold3 predictions for protein interactions can yield ipTM scores that are more predictive of true interactions when run in pools of proteins instead of pairwise predictions. Presumably, this reflects some sort of "competition effect". 38731
Reposted by Alberto Perezacscomp.bsky.social @acscomp.bsky.social · 13/03/2025Mark your calendars for the ACS COMP Saturday Social on March 22, 2025! Free 🌮 & 🍻 for COMP members! If you didn’t get the RSVP link in your email inbox, DM us with a screenshot of your COMP membership and we’ll shoot you the RSVP link 😁 #ACSSpring2025 #chemsky 162
Reposted by Alberto Perezacscomp.bsky.social @acscomp.bsky.social · 23/03/2025🧪📅 The ACS COMP agenda for #ACSSpring2025 is here! Get ready for cutting-edge sessions in computational chemistry. Scan the QR code to explore the full schedule 🔍👇 #ACSCOMP #CompChem #Cheminformatics #DrugDiscovery @chemsky.bsky.social 1128
Reposted by Alberto Perezacscomp.bsky.social @acscomp.bsky.social · 23/03/2025🚨 PLEASE RT 🚨 Are you a comp chem trainee attending Spring ACS in San Diego? Would you like to expand your network with mentors in industry & academia at the COMP Mentor Lunch? Fill out this form if you are interested in attending! forms.gle/Sq79TJihHnFW...forms.gle 178
Alberto Perez @perezlab.bsky.social · 28/02/2025It was great to show how we combine AI, molecular simulations, and experiments to understand the BET interactome at the Sanibel symposium! #compchem 060
Alberto Perez @perezlab.bsky.social · 09/02/2025🎉 MELD turns 10! A decade of accelerating molecular dynamics & integrative structural biology. From novel methods to new insights on biomolecules—excited for what’s next! 🧬 🔬 Read more: pubs.acs.org/doi/10.1021/... @UFChemistry @JCIM #CompChem #MolecularDynamics #StructuralBiologypubs.acs.org 030
Reposted by Alberto PerezArdem Patapoutian @ardemp.bskyverified.social · 03/01/2025Can’t get enough of this: ants vs humans! 4639
Reposted by Alberto PerezEric Topol @erictopol.bsky.social · 03/01/2025The effects of GLP-1 drug (semaglutide) on the proteome shows broad impact, potential relevance to many diseases beyond obesity nature.com/articles/s41...nature.comProteomic changes upon treatment with semaglutide in individuals with obesity - Nature MedicineUsing serum samples collected from participants of the STEP 1 and STEP 2 trials, the authors have uncovered changes to the proteome upon semaglutide treatment, which can shed light on the mechanism of... 410636
Reposted by Alberto PerezAdrian Roitberg @adrianroitberg.bsky.social · 03/01/2025Ever wanted to predict protein NMR chemical shifts accurately and very very fast ? Great new paper from MIkailya Darrows @mdarrows.bsky.social. chemrxiv.org/engage/chemr... Comments are welcome !chemrxiv.orgLEGOLAS: a Machine Learning method for rapid and accurate predictions of protein NMR chemical shifts.This work introduces LEGOLAS, a fully open source TorchANI-based neural network model designed to predict NMR chemical shifts for protein backbone atoms. LEGOLAS has been designed to be fast, and with... 23211
Reposted by Alberto PerezTeif lab @teiflab.bsky.social · 28/12/2024Nucleosome spacing can fine-tune higher order chromatin assembly [labs of Rosana Collepardo-Guevara and Michael Rosen] www.biorxiv.org/content/10.1... ▶️phase separation is decided by trade-off between inter- and intramolecular nucleosome stacking, favoured by 10N+5 and 10N bp linkers, respectively 0299
Reposted by Alberto PerezFrank Noe @franknoe.bsky.social · 06/12/2024Super excited to preprint our work on developing a Biomolecular Emulator (BioEmu): Scalable emulation of protein equilibrium ensembles with generative deep learning from @msftresearch.bsky.social ch AI for Science. www.biorxiv.org/content/10.1... 21441147
Alberto Perez @perezlab.bsky.social · 26/11/2024We are looking for a #CompChem postdoc to implement MELD (Modeling Employing Limited Data) into the AMBER suite of programs and test new applications in integrative modeling. Work with @adrianroitberg.bsky.social and me at #UFChemistry! Apply here explore.jobs.ufl.edu/en-us/job/53...explore.jobs.ufl.eduUniversity of Florida - Details - Post-Doctoral Associate in Computational Chemistry 085
Alberto Perez @perezlab.bsky.social · 26/11/2024Florida #HighSchools Join us #UFChemistry for the 2025 #UFChemathon! #UF_CLAS 020
Reposted by Alberto PerezMohammed AlQuraishi @moalquraishi.bsky.social · 20/11/2024#GoodThingsComeToThoseWait Sorry it's taking us a while. Promise that the wait will be well worth it! #OpenFold3 Love all the great work that's already been done #HelixFold3 #Ligo #Chai1 #Protenix #Boltz1 311926