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Nomi Harris

@nomiharris.bsky.social
121 followers 76 following 7 posts

Program Manager, Lawrence Berkeley National Laboratory Chair, Bioinformatics Open Source Conference (BOSC)

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Reposted by Nomi Harris
ISCB News @iscb.bsky.social · 30/09/2026
Hoping to present at #ISMBECCB2027 in July? Here's a sneak peek at the upcoming submission deadlines for the biggest bioinformatics and computational biology conference of the year!
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Niema Moshiri @niema.net · 17/09/2026
My department is hiring an Assistant Professor! Come join us at @ucsandiego.bsky.social Computer Science & Engineering! Beautiful city, awesome colleagues, delicious tacos 😄 apol-recruit.ucsd.edu/JPF04649
apol-recruit.ucsd.edu
Assistant Professor - CSE
University of California, San Diego is hiring. Apply now!
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 31/08/2026
We had a very successful Bioinformatics Open Source Conference (#BOSC2026) in Washington DC in July! This blog post (which includes lots of photos) gives a recap: www.open-bio.org/2026/08/16/2...
Some of the BOSC organizers with keynote speaker Eric GreenBhavesh Patel talks to another participant by his posterJason Williams has a triangle and he's not afraid to use itThe Seqera booth
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Reposted by Nomi Harris
Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 17/07/2026
Some of the #BOSC2026 organizers with keynote speaker @webmz.bsky.social
Some BOSC organizers + Maryam Zaringhalam
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Reposted by Nomi Harris
Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 17/07/2026
BOSC/Nextflow socks are fun for everyone! @seqera.io #BOSC2026
BOSC organizers and panelists smiling and holding BOSC/Nextflow socks
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 17/07/2026
The Nextflow/BOSC socks donated by #BOSC2026 sponsor @seqera.io were a big hit.
Geraldine and Nomi hand out Nextflow/BOSC socks
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 17/07/2026
Don't go over time in @jasonwilliamsny.bsky.social's sessions or he'll deploy the triangle! #BOSC2026
Jason Williams
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 15/07/2026
Don't miss the closing panel at #BOSC2026 on #OpenSource in the Age of #AI! 4:40pm today at #ISMB2026. More info: www.open-bio.org/events/bosc-...
BOSC AI panelists
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 15/07/2026
Eric Green's #BOSC2026 keynote was a fascinating tour of the past, present and future of #Genomics and #GenomicMedicine. #ISMB
Eric Green
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 15/07/2026
Eric Green, in his keynote at #BOSC2026, noted that 1989 was an important year for two reasons. #HumanGenomeProject #Genomics #ISMB2026
Eric Green presenting at BOSC 2026
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Reposted by Nomi Harris
Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 14/07/2026
Keynote speaker Maryam Zaringhalam (@webmz.bsky.social) discussed how helping scientists make their research more open can help promote public trust of science. #BOSC2026
Maryam Zaringhalam
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 14/07/2026
Harry Caufield (@severaltimes.bsky.social) presented a #BOSC2026 talk about a knowledge graph registry. Not sure what a knowledge graph is? Harry made an analogy with a subway map (stations == nodes, connections between stations == edges).
Harry Caufield
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 14/07/2026
Aydan Gasimova talks to @severaltimes.bsky.social by her #BOSC2026 poster
Aydan Gasimova and Harry Caufield
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Reposted by Nomi Harris
Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 14/07/2026
#BOSC2026 chair @nomiharris.bsky.social with the poster designed by @monimunozto.bsky.social that shows our keynote speakers, panelists, and sponsors (@seqera.io, NIH ODSS, and @datadryad.bsky.social) 🍐
Nomi Harris by poster
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Reposted by Nomi Harris
Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 14/07/2026
#BOSC2026 has begun! Our first session at #ISMB2026 is a joint session with @bokr.bsky.social. In his talk about KGXVal, Daniel Korn addressed something many of us have wondered about: why do turkeys have math anxiety? 🦃➗😰
Daniel Korn
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Reposted by Nomi Harris
Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 13/07/2026
#BOSC2026 organizers @nomiharris.bsky.social, @monimunozto.bsky.social, and @jasonwilliamsny.bsky.social based in the turquoise glow during the opening keynote at #ISMB2026
Nomi Harris, Mónica Muñoz Torres, and Jason Williams
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 13/07/2026
The #BOSC2026 talks start tomorrow, but posters started today! BOSC Chair @nomiharris.bsky.social visited Mete Akdogan's poster this morning. Find the full BOSC schedule at www.open-bio.org/events/bosc-...
BOSC Chair Nomi Harris and Mete Akdogan by his poster
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Reposted by Nomi Harris
Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 10/07/2026
Attending #ISMB2026? Check out the #BOSC2026 keynotes and panels: Keynote 1: Maryam Zaringhalam Keynote 2: Eric Green Panel 1: Policies and Strategies for Resilient Open Science Panel 2: Open Source in the Age of AI More info: www.open-bio.org/events/bosc-...
open-bio.org
BOSC 2026
Since 2000, BOSC has covered all aspects of open source bioinformatics and open science. BOSC 2026, the 27th annual Bioinformatics Open Source Conference, will take place July 14-15 in Washington, DC,...
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Reposted by Nomi Harris
Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 16/06/2026
The #BOSC2026 poster schedule is now up on our Schedule page: www.open-bio.org/events/bosc-...
open-bio.org
BOSC 2026 Schedule
BOSC 2026 keynote speakers KEYNOTE: Eric Green From the Human Genome Project to the Realization of Genomic Medicine: A Scientific, Medical, and Societal Journey KEYNOTE: Maryam Zaringhalam Sci...
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 17/06/2026
The #OpenSource in the Age of #AI panel will be the second of two panels at #BOSC2026. Find more info, including names and bios of panelists, here: www.open-bio.org/events/bosc-...
open-bio.org
BOSC 2026 Panels
For the first time ever, BOSC will include two panel discussions featuring perspectives from across the open science, bioinformatics, policy, and AI landscapes. Panel 1: Policies and Strategies for Re...
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 17/06/2026
We're excited about the great panels that will be part of #BOSC2026! This is the first of two panels. Find more info, including names and bios of panelists, here: www.open-bio.org/events/bosc-...
open-bio.org
BOSC 2026 Panels
For the first time ever, BOSC will include two panel discussions featuring perspectives from across the open science, bioinformatics, policy, and AI landscapes. Panel 1: Policies and Strategies for Re...
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Reposted by Nomi Harris
Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 27/05/2026
The #BOSC2026 schedule is up! (Posters will be added soon.) www.open-bio.org/events/bosc-...
open-bio.org
BOSC 2026 Schedule
BOSC 2026 keynote speakers KEYNOTE: Eric Green From the Human Genome Project to the Realization of Genomic Medicine: A Scientific, Medical, and Societal Journey KEYNOTE: Maryam Zaringhalam Sci...
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 17/04/2026
We are delighted to welcome back @seqera.io as a Gold Sponsor of #BOSC2026! Seqera, built by the creators of Nextflow, is the enterprise-first bioinformatics platform trusted by leading pharma and diagnostics companies to build, validate, and scale bioinformatics with confidence.
seqera.io
Seqera | Bioinformatics Platform by the developers of Nextflow
The bioinformatics platform that brings your data, pipelines, and teams together. Build, deploy & scale your science—from discovery to impact.
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 07/04/2026
We're excited about the TWO panel discussions that we're planning for #BOSC2026: 1. Policies and Strategies for Resilient Open Science 2. Open Source in the Age of AI Read about them here: www.open-bio.org/events/bosc-...
open-bio.org
BOSC 2026 Panels
For the first time ever, BOSC will include two panels on important and timely topics. Policies and Strategies for Resilient Open Science As we gather in Washington, D.C. for BOSC 2026, we stand at the...
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Reposted by Nomi Harris
Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 30/03/2026
#genAI is changing everything, including the #OpenSource ecosystem. #BOSC2026 wants to hear your thoughts! Submit your abstract by April 9 to be considered for a talk. Read more: www.open-bio.org/posts/Open-S... Abstract submission: www.open-bio.org/events/bosc-...
An AI-generated claymation-style illustration of an elephant surrounded by large anthropomorphic pears expressing various emotions
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 26/03/2026
We're proud to have @jasonwilliamsny.bsky.social on the #BOSC2026 Organizing Committee, and we applaud his latest honor - he is now one of the distinguished AAAS Fellows! 🙌🍐
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Jason “Obstacle to Progress” Williams @jasonwilliamsny.bsky.social · 20/03/2026
We are thrilled to announce our second keynote speaker for #BOSC2026: Eric Green, the Chief Medical Officer at Illumina. Dr. Green was a key architect of the Human Genome Project and led the National Human Genome Research Institute (NHGRI) for 15 years. More info: www.open-bio.org/events/bosc-...
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Mónica Muñoz Torres, PhD @monimunozto.bsky.social · 17/03/2026
We are delighted to announce our first keynote speaker for #BOSC2026: Maryam Zaringhalam, Ph.D. @webmz.bsky.social, the Senior Director of Policy at the Center for Open Science @cos.io. #OpenScience #ISMB2026 #AIready #data as a #publicgood More information at www.open-bio.org/events/bosc-...
Dr. Maryam Zaringhalam stands by a concrete balcony, with trees in the background. She looks at the camera with a casual, gentle expression. She wears a navy blue outfit.
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 05/03/2026
Time to think about submitting an abstract to #BOSC2026! The deadline for submitting talk/poster abstracts is April 9. (There is an additional late poster round that closes in May, but those late submissions won't be considered for talks.) www.open-bio.org/events/bosc-... #OpenSource #OpenScience
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 25/02/2026
#BOSC2026 is looking for sponsors! Your sponsorship helps BOSC advance open-source bioinformatics and open science and broaden representation (www.open-bio.org/obf-dei/). Info: open-bio.org/events/bosc/.... Please contact us for details about sponsorship levels and perks!
Monica Munoz Torres holds the BOSC 2025 posterBOSC Chair Nomi Harris by the BOSC 2024 poster
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 07/01/2026
Submissions to BOSC are via ISMB's submission portal. ISMB is run by ISCB (confused yet? 😜). Therefore, BOSC submissions close when ISMB submissions close: April 9, AoE (explained below).
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 06/01/2026
Call for Comments on BOSC 2026 Keynote Speaker Candidates We appreciate the excellent keynote speaker suggestions for #BOSC2026. We invite you to anonymously share any concerns about the suitability of the nominated individuals by Friday Jan 9. www.open-bio.org/2025/12/18/2...
open-bio.org
Call for Comments on BOSC 2026 Keynote Speaker Candidates
We thank our community for the excellent keynote speaker suggestions for BOSC 2026. The next phase of our selection process invites you to share any concerns about the suitability of the nominated ind...
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 27/10/2025
Save the date: #BOSC2026 (www.open-bio.org/events/bosc) will take place July 13-14 in Washington, DC, as part of ISMB 2026 (July 12-16). We hope you will join us in person or online! 🍐 #Bioinformatics #OpenSource
BOSC 2025 organizing committee
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Reposted by Nomi Harris
Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 04/12/2025
Keynote talks are always a highlight of BOSC. We invite you, our community, to nominate potential keynote speakers for #BOSC2026! 🍐 www.open-bio.org/2025/12/02/2...
BOSC 2025 keynote speaker Chris MungallBOSC 2025 keynote speaker Christine Orengo
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 10/10/2025
Videos of the #BOSC2025 talks are now available on our schedule page (scroll down to Talks), as well as on our YouTube channel. Enjoy! 🍐 Schedule page: www.open-bio.org/events/bosc-... YouTube channel: www.youtube.com/@OBFBOSC/vid... #Bioinformatics #OpenSource
Chris Mungall giving keynote talk at #BOSC2025
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 09/09/2025
Check out our #BOSC2025 report on @f1000publishing.bsky.social (It includes lots of pictures!) 🍐 f1000research.com/articles/14-...
f1000research.com
F1000Research Article: BOSC 2025, the 26th Bioinformatics Open Source Conference.
Read the latest article version by Nomi L. Harris, Karsten Hokamp, Jessica Maia, Hervé Ménager, Monia C Munoz-Torres, Tazro Ohta, Deepak Unni, Jason Williams, at F1000Research.
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Open Bioinformatics Foundation @openbio.bsky.social · 30/09/2025
An open letter about the recent cuts at GigaScience: www.open-bio.org/2025/09/30/2... (open for signatures until the end of October) #OpenScience #OpenData #GigaScience
Scott Edmunds cuts the cake at the 2025 GigaScience birthday party at ISMB/ECCB 2025
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Jason “Obstacle to Progress” Williams @jasonwilliamsny.bsky.social · 25/09/2025
Please share with anyone who cares about NSF support for graduate students and take 30 seconds to sign and leave a comment. The deadline for the 2025 Graduate Research Fellowship Program is about one month away and literally no one can apply. #NSFGRFP jasonjwilliamsny.github.io/grfp2025/
jasonjwilliamsny.github.io
An Open Letter to U.S. STEM Leadership on the NSF Graduate Research Fellowship Program
An Open Letter to U.S. STEM Leadership on the NSF Graduate Research Fellowship Program
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Chris Mungall @cmungall.bsky.social · 25/08/2025
Very exciting to see the research from @cziscience.bsky.social on the rBio distilling a black box foundation model (in this case a "virtual cell" perturbation model) into a smaller reasoner LLM. And it uses ontologies as part of RL! chanzuckerberg.com/blog/rbio-re...
chanzuckerberg.com
rBio: Reasoning Model Trained on Virtual Cell Simulations
Scientists can ask complex biological questions in plain language and get predictions about gene interactions.
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 27/07/2025
During the #BOSC2025 closing remarks, chair @nomiharris.bsky.social thanked the BOSC sponsors (@cziscience.bsky.social @seqera.io @gigascience.bsky.social) for covering registration for 12 BOSC presenters.
BOSC chair Nomi Harris
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 27/07/2025
At the end of #BOSC2025, the organizing committee was joined on stage by the review committee members who were able to go to Liverpool.
BOSC review and organizing committee members
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 26/07/2025
An attentive audience at #BOSC2025
Part of the audience at #BOSC2025
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 26/07/2025
A few shots of the #BOSC2025 panelists discussing their thoughts on data sustainability. Panelists were @scedmunds.bsky.social, @cmungall.bsky.social, @varsha-khodiyar.bsky.social, Tony Burdett, and Nicky Mulder; the moderator was @monimunozto.bsky.social
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 26/07/2025
@proflhunter.bsky.social makes a point during a Q&A at #BOSC2025, while continuing to show off his #BOSC2024 socks
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 24/07/2025
We encourage those who presented at #BOSC2025 to add their slides and/or poster to the BOSC collection at F1000: f1000research.com/collections/bosc
f1000research.com
Articles from collection Bioinformatics Open Source Conference (BOSC) - F1000Research
Read the latest peer reviewed Bioinformatics Open Source Conference (BOSC) articles and more on F1000Research
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Bioinformatics Open Source Conference (BOSC) @bosc.bsky.social · 22/07/2025
Just as Chris launched into the topic of knowledge censorship, the AI transcription and the slides stopped working. Coincidence?? 🤔 #BOSC2025
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Jason “Obstacle to Progress” Williams @jasonwilliamsny.bsky.social · 22/07/2025
Fantastic #BOSC2025 panel on data sustainability to cap off the conference. #ISMBECCB2025
Panelists on stage
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Jake Lever @jakelever.bsky.social · 22/07/2025
Quick shout out for the Make Data Count challenge to improve data citation from @gigascience.bsky.social's Scott Edmunds. Looks cool and 💲prizes! #BOSC2025 #ISMBECCB2025 www.kaggle.com/competitions...
kaggle.com
Make Data Count - Finding Data References
Identify scientific data use in papers and classify how they are mentioned.
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GigaScience Journal @gigascience.bsky.social · 22/07/2025
Closing session at #BOSC2025, Guy Cochrane talking about the Global Biodata Infrastructure, hopefully framing things for the sustainability panel (which our EiC @scedmunds.bsky.social is participating in #ISMB2025 #ISMBECCB2025
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GigaScience Journal @gigascience.bsky.social · 22/07/2025
Guy ending his talk telling the #BOSC2025 audience if they value global data infrastructure sign their open letter globalbiodata.org/open-letter-... #ISMBECCB2025
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