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Scott C Edmunds

@scedmunds.bsky.social
261 followers 333 following 243 posts

Iranian-Scottish Londoner lost in the East, trying to get his head around scientific data and publishing

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Reposted by Scott C Edmunds
CitizenScience.Asia @citsciasia.bsky.social · 01/10/2026
If you are at the Formosa Sustainable Conservation International Forum in Tapei this weekend come and check our co-founder Mendel Wong speak in the session on #CitizenScience & Conservation on Saturday at 11:20–12:00 formosa-team.replit.app
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Scott C Edmunds @scedmunds.bsky.social · 24/09/2026
Had a nice visit to the the Icahn School of Medicine at Mount Sinai today, and got a chance to present on the work I recently published on "Integrating Machine Learning Standards in Disseminating Machine Learning Research" doi.org/10.5334/dsj-...
presentation on ML standards
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Scott C Edmunds @scedmunds.bsky.social · 18/09/2026
The Summer of Software (and AI) Standards. Despite the seemingly quiet summer a lot has happened in the background on AI and research software policies and best practice, with much guidance published (including by me) that I cover here substack.com/home/post/p-...
substack.com
The Summer of Software (and AI) Standards
Despite the seemingly quiet summer a lot has happened in the background on AI and research software policies and best practice, with much guidance published (including by me) that I will cover here
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Scott C Edmunds @scedmunds.bsky.social · 17/09/2026
If a "small number of executives of the owning organization" dismiss an entire editorial team for non-substantial reasons then who should they to report transgressions of such freedom to? Asking for a friend. www.icmje.org/recommendati... #ICMJEIIDaversary #neverforget
ICMJE II D website
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Scott C Edmunds @scedmunds.bsky.social · 16/09/2026
Just realised its #PeerReviewWeek, so I thought I'd re-share my piece from last year on why we need a FAIR Principles for Peer Review doi.org/10.59350/dpr...
FAIR principles of peer review infographic
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Scott C Edmunds @scedmunds.bsky.social · 31/07/2026
After previous "wobbles" I don't know if its permanently gone (especially as the entire @gigascience.bsky.social gigasciencejournal.com domain is also down) but GigaBlog no longer loads. To access back content I made sure everything was archived in Rogue Scholar rogue-scholar.org/communities/...
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Reposted by Scott C Edmunds
Institute for Research Software @softwaresaved.bsky.social · 22/07/2026
🟣 We have published a new guide on the Responsible use of artificial intelligence in research software, written by Scott C. Edmunds. Find out more about the guide and how to access it at www.software.ac.uk/news/new-gui...
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Scott C Edmunds @scedmunds.bsky.social · 21/07/2026
Great post by @kuanhuang.bsky.social in the @force11.bsky.social Upstream blog that is timely with the NIH Data Sharing S-index Challenge winners being announced today: Beyond mandates: making data sharing count doi.org/10.54900/pg6... #SIndex #OpenData
doi.org
Beyond mandates: making data sharing count
Twenty years ago, data-sharing policies mostly asked researchers to promise that files would be available. Today, sharing is built into the machinery of research funding. The US National Institutes of...
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Scott C Edmunds @scedmunds.bsky.social · 17/07/2026
Please try out theSindex and give us feedback on our tool that measures the network impact of datasets thesindex.org
Screenshot of theSindex
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Scott C Edmunds @scedmunds.bsky.social · 16/07/2026
Ahh, the metadata of censorship. doi.org/10.1038/s415...
The funding declaration for funding that shouldn't exist...
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Scott C Edmunds @scedmunds.bsky.social · 15/07/2026
GIGA, the Global Invertebrate Genomics Alliance @invertebrates.bsky.social, had their 6th meeting in Boracay last week and I have a write-up on the latest goings on in the wonderful world of squishy spineless creature genomics open.substack.com/pub/scedmund... #GIGAVI
open.substack.com
When GIGA met Giga. Celebrating the Spineless with the Global Invertebrate Genomics Alliance
GIGA, the Global Invertebrate Genomics Alliance, had their 6th meeting in Boracay last week and I have a write-up on the latest goings on in the wonderful world of squishy spineless creature genomics
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Scott C Edmunds @scedmunds.bsky.social · 10/07/2026
Great to see a #GIGAVI keynote by Marcela Uliano-Silva @marcelauliano.bsky.social on an atlas of molluscan genomics. Marcela has a long history working on these species, you can see her 2018 TEDtalk on crowdfunding the golden mussel genome that we loved at #BauhiniaGenome youtu.be/IOPEPnQYoOE?...
Marcela talking molluscs
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Scott C Edmunds @scedmunds.bsky.social · 07/07/2026
Blast from the past here in Boracay watching Agostinho Antunes give a keynote at #GIGAVI setting the scene presenting many genomes I helped publish at @gigascience.bsky.social including the avian phylogenomics project (academic.oup.com/gigascience/...) and the giant squid doi.org/10.1093/giga...
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Scott C Edmunds @scedmunds.bsky.social · 07/07/2026
Just touched down in Boracay for this conference. Will be doing a very meta-GIGA talk here on Thursday. Watch this space and #GIGAVI hashtag this week for invertebrate genome news...
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Scott C Edmunds @scedmunds.bsky.social · 07/07/2026
Just touched down in Boracay for this conference. Will be doing a very meta-GIGA talk here on Thursday. Watch this space and #GIGAVI hashtag this week for invertebrate genome news...
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Scott C Edmunds @scedmunds.bsky.social · 25/06/2026
Spurred on by a recent article about authorship policy in China I've written a piece on how you can help change research policy for the better, even in China scedmunds.substack.com/p/how-you-ca...
scedmunds.substack.com
How you can help change research policy for the better, even in China
Policy research and outreach is a high-risk/high-reward effort, and coming across a recent article on improvements to authorship policies in China has made me think about some lessons here.
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Scott C Edmunds @scedmunds.bsky.social · 13/06/2026
The future of interactive preprints and papers were on display at the #FORCE2026 conference and here I discuss what was presented and what the future of "living figures" might hold. As well as raving about the @openrxiv.bsky.social labs and @curvenote.com demos scedmunds.substack.com/p/preprints-...
scedmunds.substack.com
Preprints and Papers Come to Life at FORCE2026
The future of interactive preprints and papers were on display at the FORCE2026 conference in Singapore, and here I discuss what was presented and what the future of "living figures" might hold
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Scott C Edmunds @scedmunds.bsky.social · 11/06/2026
I've written up my thoughts on last weeks brilliant #FORCE2026 @force11.bsky.social conference in Singapore. FORCE at 15: The Jagged Frontier of Scholarly Communication Reaches Asia open.substack.com/pub/scedmund...
open.substack.com
FORCE at 15: The Jagged Frontier of Scholarly Communication Reaches Asia
When the FORCE11 manifesto predicted the Future of Research Communication in 2011, the 15th Anniversary FORCE meeting in Singapore has been great to look back at how many predictions came true.
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Scott C Edmunds @scedmunds.bsky.social · 05/06/2026
#FORCE2026 may be over, but the collocated #DataCiteConnect2026 workshop is now kicking off to discuss all things @datacite.org
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Scott C Edmunds @scedmunds.bsky.social · 05/06/2026
That went fast. Closing #FORCE2026 remarks now from conference host and co-Chair Bella Ratmelia from SMU. Seeing myself from the organising committee, Bella and the local team did an incredible job. It really felt a like lot of the original "Beyond the PDF" spirit and energy finally made it to Asia
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Scott C Edmunds @scedmunds.bsky.social · 05/06/2026
Contrasting FAIR data, Ginny Barbour introducing us to the concept of BADDR data - relating to negative discourse for First Nations people. Blaming data Aggregating data Decontextualising data Deficit, government priority data Restricted Access data #FORCE2026
BADDR data slide
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Reposted by Scott C Edmunds
FORCE11 @force11.bsky.social · 05/06/2026
Closing keynote @ginnybarbour.bsky.social on the state of scholarly publishing and how to affect change. #FORCE2026
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Scott C Edmunds @scedmunds.bsky.social · 05/06/2026
Cool to hear Ginny Barbour’s origin story with a “tale of 3 journals” in her #FORCE2026 keynote. Hearing about her time (and the journal history) at Lancet, PLOS Medicine, and the Medical Journal of Australia
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Scott C Edmunds @scedmunds.bsky.social · 05/06/2026
Sean Mooney now talking at #FORCE2026 about Reusable, Interoperable, Scalable digital ecosystems for AI-driven biomedicine. Speaking with his experience as the first scientist to Direct the NIH Centre for IT
Sean on stage
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Scott C Edmunds @scedmunds.bsky.social · 04/06/2026
Day 2 of #FORCE2026 ending with a panel on recognising research data in tenure and promotion. @kristiholmes.bsky.social starting off talking about @makedatacount.bsky.social and IDEA (Institutional Data Evaluation and Assessment)
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Scott C Edmunds @scedmunds.bsky.social · 04/06/2026
Up now at #FORCE2026 Susanna Sansone is presenting the TIER2 interventional study looking at journal policy checklists and developing a handbook. It was great to participate in this for @gigascience.bsky.social
Susanna at FORCE2026
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Scott C Edmunds @scedmunds.bsky.social · 04/06/2026
Just finished an interactive #FORCE2026 BoF with @danielskatz.org discussing the challenges of AI+software+ethics with a great audience. This covered the issues outlined in our (and @mhmdhsini.bsky.social) Scholarly Kitchen guest post scholarlykitchen.sspnet.org/2025/08/28/g...
Dan and a slido
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Scott C Edmunds @scedmunds.bsky.social · 04/06/2026
Aster Zhao from HKUST now presenting a comparison between human, AI-assisted and AI-dominant systematic review production. Funny she used an Elsevier paper to benchmark as it was useful using work in the most closed access publisher as it likely wouldn’t have been crawled #FORCE2026
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Scott C Edmunds @scedmunds.bsky.social · 04/06/2026
Ian Mulvaney keynote on AI at #FORCE2026 very nicely setting up a lot of good background for the AI software ethics BoF @danielskatz.org and I are hosting this afternoon
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Scott C Edmunds @scedmunds.bsky.social · 03/06/2026
Excited #FORCE2026 kicking off in Singapore, @chodacki.bsky.social welcoming us and giving some background on the story so far with @force11.bsky.social for the newbs among the >130 attendees
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Scott C Edmunds @scedmunds.bsky.social · 03/06/2026
At #FORCE2026 @force11.bsky.social meeting in Singapore, the pre-conference workshops are now kicking off and I’m helping Evgeny Bobrov run the Data Usage Typology WG workshop. We want this to be hands on with attendees data
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Scott C Edmunds @scedmunds.bsky.social · 23/05/2026
The write-up of the #MedHackathon Asia 2025 gathering in Burapha Uni I attended is out now. Great OUP managed to get collaborative authorship to work for this as they've messed this up in the past doi.org/10.1093/giga...
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Scott C Edmunds @scedmunds.bsky.social · 06/05/2026
Mission Accomplished for Vectors of Human Disease Data Mobilization. With the final papers out in the @gigabytejournal.bsky.social-@gbif.org-TDR Vectors of Human Disease series I look back at the lessons learned from this targeted data mobilization approach scedmunds.substack.com/p/mission-ac...
scedmunds.substack.com
Mission Accomplished for Vectors of Human Disease Data Mobilization
The final papers coming out in the GigaByte-GBIF-TDR Vectors of Human Disease series provides a nice opportunity to look back at the lessons learned from this targeted data mobilization approach
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Scott C Edmunds @scedmunds.bsky.social · 30/04/2026
"support for DORA in East Asia more widely is rare" Proud we went against this trend and signed it for HK based @gigascience.bsky.social in 2016 doi.org/10.59350/8wa...
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Scott C Edmunds @scedmunds.bsky.social · 28/04/2026
My first time publishing in EON (Editorial Office News) on "Scaling Equitable Data Publishing: Insights for Editorial Teams From a WHO-Sponsored Program". doi.org/10.18243/eon...
doi.org
EON
The International Society of Managing and Technical Editors (ISMTE) serves a unique niche within the academic, scientific, medical, technical, and professional publishing industry—editorial office sta...
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Scott C Edmunds @scedmunds.bsky.social · 17/04/2026
Why have I never come across BOSS before? My new #1 target journal. The Biannual Online-Journal of Springsteen Studies (ISSN:2368-4712). boss.mcgill.ca
BOSS cover.
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Scott C Edmunds @scedmunds.bsky.social · 14/04/2026
Cool to see GigaScience Press (AKA @gigabytejournal.bsky.social) is still the GOAT in metadata quality. #1 ranking out of 28,379 publishers in this Nexus Score ranking nexus-score.vercel.app/member/23445
Nexus leaderboard
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Scott C Edmunds @scedmunds.bsky.social · 13/04/2026
Crossposting my recent @makedatacount.bsky.social guest blog where I vented on the topic of scholarly metadata, and covered a number of new reports and schemes demonstrating the importance of quantitative data in demonstrating the benefits of #OpenScience. scedmunds.substack.com/p/mdc-blog-c...
scedmunds.substack.com
MDC blog Cross-Post: The Road to Open Science Requires Making Data Count Better
This is a cross-post from the Make Data Count blog covering a number of new reports and schemes demonstrating the importance of quantitative data in demonstrating the benefits of Open Science.
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Scott C Edmunds @scedmunds.bsky.social · 09/04/2026
Nice to have a piece featured on the @scistarter.bsky.social blog for #CitizenScienceMonth #ActsofScience CitizenScience.Asia: Ten Asian Citizen Science Projects To Keep You Busy in Citizen Science Month pages.scistarter.org/citizenscien...
citizensciencemonth.org
Citizen Science Month - SciStarter
SciStarter connects people to citizen science projects, citizen scientists, and resources. Real science we can do together.
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Reposted by Scott C Edmunds
Make Data Count @makedatacount.bsky.social · 07/04/2026
In this new post, Make Data Count Advisory Group Member Scott Edmunds @scedmunds.bsky.social shares his thoughts on the need for more quantitative and better evidence on the use and reach of open data to make the case for the outcomes and benefits of Open Science. makedatacount.org/read-our-blo...
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Scott C Edmunds @scedmunds.bsky.social · 03/04/2026
Happy #CitizenScienceMonth. Wearing my @citsciasia.bsky.social hat I've put together a list of 10 Asian #CitizenScience projects you can participate and contribute small acts of science this month substack.com/home/post/p-...
substack.com
Citizen Science Month: Ten Asian Citizen Science Projects To Contribute Acts of Science
Today is the start of Citizen Science Month, a global celebration held every April that highlights the public's role in scientific research. To celebrate I have a list of 10 projects to join in Asia.
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Scott C Edmunds @scedmunds.bsky.social · 27/03/2026
Final two @gbif.org / TDR vectors of human disease series papers published this week. I told the sponsors at WHO we'd publish 12 papers in this final call, so it's nice to see papers 11 and 12 finally out in @gigabytejournal.bsky.social doi.org/10.46471/gig... doi.org/10.46471/gig...
doi.org
Spatial temporal distribution of Anopheles mosquitoes in different ecological zones of Ghana
Spatial temporal distribution of Anopheles mosquitoes in different ecological zones of Ghana
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Scott C Edmunds @scedmunds.bsky.social · 12/03/2026
Enjoyed yesterdays @okfn.bsky.social Future of #OpenData webinar last night celebrating 20 years of CKAN, but my highlight has to be discovering the CKAN rap. Great video with Rufus channeling Richard Ashcroft on Euston Road youtu.be/MsuXqf9wog0?... #OpenDataDay
youtu.be
CKAN Song - CBR Edit for the Canberra Digital Challenge
YouTube video by LinkDigitalTV
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Scott C Edmunds @scedmunds.bsky.social · 08/03/2026
Nice to see Prof Jun Iio at #FOSSASIA stressing the importance of #opensource and transparency in research. Particularly timely as AI-coding is creating new challenges in this (see my piece on the topic scholarlykitchen.sspnet.org/2025/08/28/g...)
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Scott C Edmunds @scedmunds.bsky.social · 08/03/2026
The #fossasia Community Day kicking off here in Bangkok. Convenient that an #opensource conference coincides with and celebrates #IWD2026 and women coders
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Scott C Edmunds @scedmunds.bsky.social · 01/03/2026
Been uploading some of my Thai travel photos to Flickr, including Sukhothai flic.kr/s/aHBqjCLG6e
flic.kr
Sukhothai
Explore this photo album by Scott Edmunds on Flickr!
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Scott C Edmunds @scedmunds.bsky.social · 23/02/2026
Part 2 of my write-up on our new #MachineLearning standards paper, where I muse on the big-picture implications of using ML standards in journal review, discuss costs v benefits, and how they may relate to the sustainability and wider economics of AI. scedmunds.substack.com/p/throwing-l...
scedmunds.substack.com
Throwing Light on Machine Learning, Pt 2. The Costs and Benefits of ML Standards
Musings on the big-picture implications of using Machine Learning standards in journal review and benchmarking, their costs v benefits, and how they may relate to sustainability and economics.
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Reposted by Scott C Edmunds
Richard Sever @richardsever.bsky.social · 22/02/2026
"For open infrastructure, the burden of AI harvesting is existential...a swarm of AI scrapers mirror entire collections, the cost of being open rises sharply...degraded performance for legitimate users, polluted metrics, staff time diverted to firefighting" www.digital-science.com/blog/2026/02...
digital-science.com
No shortcuts to research information citizenship - Digital Science
Being open isn't enough - true "research information citizenship" requires a robust, genuinely open research infrastructure.
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Scott C Edmunds @scedmunds.bsky.social · 19/02/2026
Just published a “making of the paper” post on our recent Data Science Journal article on transparency in Machine Learning, a hands-on case study in how journals can try to address the meteoric rise in the use of AI-methods (and resulting black boxes) scedmunds.substack.com/p/throwing-l...
scedmunds.substack.com
Throwing Light on Throwing Light on Machine Learning
Here is a “making of the paper” post on my recent Data Science Journal article on transparency in Machine Learning, a case study in how journals can handle the meteoric rise in the use of AI-methods.
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Scott C Edmunds @scedmunds.bsky.social · 17/02/2026
You just know Planet Partners Productions Ltd. unsuccessfully tried to pitch "It's Another Royal Knockout" and other Monkey Tennis like TV ideas www.theguardian.com/uk-news/2026...
theguardian.com
Six Sarah Ferguson-linked companies to close after Epstein revelations
Messages from ex-wife of Andrew Mountbatten-Windsor to sex offender, sent after his conviction, came to light last month
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