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nf-core

@nf-co.re
2.1K followers 16 following 634 posts

A community effort to collect a curated set of analysis pipelines built using Nextflow.

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nf-core @nf-co.re · 12h
6 days to go until the Barcelona Hackathon!🤩 hubs.la/Q04zJl_h0. Today's project spotlight ⬇️
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nf-core @nf-co.re · 08/10/2026
⏳1 week to go until the Barcelona Hackathon: hubs.la/Q04zzg460 Today's project spotlight ⬇️
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nf-core @nf-co.re · 07/10/2026
⏳8 days to go! Join us in Barcelona to collaborate on projects, discuss code & learn from eachother: hubs.la/Q04zpHK80 Today's spotlight ⬇️ ⚒️ Project → Clew: impact analysis over the lineage Nextflow already writes 🧑‍💻 Project Lead → Seema Jagadeesh, QuietFlare 🔗 Project Link → hubs.la/Q04zpHJV0
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nf-core @nf-co.re · 06/10/2026
9 days until the Barcelona Hackathon! Today's project spotlight ⬇️ ⚒️ Project → nf-core/dartseq - Finalise for its first stable release 🧑‍💻 Project Lead → Olga Brovkina, Institute of Clinical Molecular Biology 🔗 Project Link → hubs.la/Q04zfNph0
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nf-core @nf-co.re · 05/10/2026
The Barcelona Hackathon is happening next week!⏳ Choose from 16 hackathon projects or submit your own. Today's project spotlight ⬇️ ⚒️ Project → Static typing in nf-core 🧑‍💻 Project Lead → Nicolas Vannieuwkerke, UZ Gent 🔗 Project Link → hubs.la/Q04z6-2X0
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nf-core @nf-co.re · 02/10/2026
13 days to go, and the projects keep coming!👩‍💻Choose from 16 hackathon projects or bring your own idea.💡 hubs.la/Q04z02gP0 #NextflowSummit Todays' hackathon project spotlight ⬇️
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nf-core @nf-co.re · 01/10/2026
2 weeks to go until the nf-core Hackathon in Barcelona. There's still time to get involved: hubs.la/Q04ySz520 #NextflowSummit Todays' hackathon project spotlight ⬇️ ⚒️ Project → Docs guides 🧑‍💻 Project Lead → @chrishakk.bsky.social, @seqera.io 🔗 Project Link → hubs.la/Q04ySzsW0
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nf-core @nf-co.re · 30/09/2026
15 days to go until the Hackathon in Barcelona.⏳ Join us: hubs.la/Q04yHBpQ0 💡Choose from 1 of 14 hackathon projects or submit your own project idea! Today's project spotlight 🧵
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nf-core @nf-co.re · 29/09/2026
⏳ 16 days to go! Join the Barcelona Hackathon at the #NextflowSummit: hubs.la/Q04yxZJW0 Today's project spotlight ⬇️ ⚒️ Project → nf-core/seqinspector improvements 🧑‍💻 Project Lead → Franziska Bonath, @kthlibrary.bsky.social 🔗 Project Link → hubs.la/Q04yxZPT0
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nf-core @nf-co.re · 28/09/2026
⏳ 17 days until the Barcelona nf-core Hackathon! Join one of the existing projects, or bring your own! Today's project spotlight ⬇️ ⚒️ Project → nf-core/spatialaxe improvements 🧑‍💻 Project Lead → Florian Heyl, @cnag-eu.bsky.social 🔗 Project Link → hubs.la/Q04ypPWK0
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nf-core @nf-co.re · 25/09/2026
📆 We've extended the deadline for the Barcelona Hackathon! Choose from 13 hackathon projects, or bring your own project idea.💡Today's project spotlight ⬇️ ⚒️ Project → AWS megatests overhaul 🧑‍💻 Project Lead → @rikehanssen.bsky.social, @seqera.io 🔗 Project Link → hubs.la/Q04yjbwG0
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nf-core @nf-co.re · 24/09/2026
We have now have 13 projects for the Barcelona Hackathon.⛰️Check out today's project spotlight 👇 #NextflowSummit ⚒️ Project → nf-core/sarek improvements 🧑‍💻 Project Lead → @maxulysse.github.io, @scilifelab-ngi.bsky.social 🔗 Project Link → nf-co.re/hackathon-pr...
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nf-core @nf-co.re · 23/09/2026
The Barcelona nf-core Hackathon is happening in 3 weeks!⏳ Choose from 13 projects to work on, or bring your own project idea. Today's project spotlight 👇 ⚒️ Project → Benchmarking (Special Interest Group) 🧑‍💻 Project Lead → Kübra Narci, @ghga.bsky.social 🔗 Project Link → nf-co.re/hackathon-pr...
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nf-core @nf-co.re · 22/09/2026
23 days to go until the Hackathon in Barcelona ⬇️ Check our today's project spotlight. ⚒️ Project → nf-core/mag improvements 🧑‍💻 Project Lead → Jonathan Rondeau-Leclaire, Université de Sherbrooke 🔗 Project Link → nf-co.re/hackathon-pr...
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nf-core @nf-co.re · 21/09/2026
We now have 12 projects for the Barcelona Hackathon on Oct 15-16! Today's project spotlight ⬇️ ⚒️ Project → Agentic module development 🧑‍💻 Project Lead → Evangelos Karatzas, @ebi.embl.org 🔗 Project Link → nf-co.re/hackathon-pr...
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nf-core @nf-co.re · 10/09/2026
Just 14 days left to register for the Barcelona Hackathon this October! We have so many great projects lined up already across pipelines, components, special interest groups, tooling, and community.🌍 Or bring your own ideas! 🔗 Register now: hubs.la/Q04x6Dw30
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nf-core @nf-co.re · 28/08/2026
Curious about the nf-core Hackathon in Barcelona this October?👩‍💻 Check out hackathon projects and group leaders so far🧵
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nf-core @nf-co.re · 24/07/2026
We're heading to Barcelona on Oct 15-16 for an in-person hackathon. Whether you're already involved in nf-core or not, this hackathon is the perfect place to get to know members of the @nextflow.io community.
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nf-core @nf-co.re · 08/07/2026
Spaces are filling up for the nf-core Hackathon in Barcelona!👩‍💻 Early bird registration is 25% off until Jul 31. 📅 Oct 15-16, 2026 📍 Hotel SB Glow, Barcelona 🔗 summit.nextflow.io/2026/barcelo...
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nf-core @nf-co.re · 10/04/2026
The nf-core Hackathon in Boston is happening in just over 2 weeks! 💻Join us April 28–29 for two days of collaborative hacking.🎟️ Register now: hubs.la/Q04brb4c0 Whether you want to add new features to existing pipelines, work on tooling, or tackle community initiatives — there's something for you.
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nf-core @nf-co.re · 21/10/2025
Between September 22nd and 26th, the nf-core core team gathered in Stockholm to tackle the big questions facing our growing community.
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nf-core @nf-co.re · 28/05/2025
You might know that @nf-co.re is crazy about @nextflow.io pipelines, but did you know that we're also mad about laptop stickers? 😆 We have a whole web page dedicated to them where you can see the whole collection so far: nf-co.re/stickers
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nf-core @nf-co.re · 21/03/2025
Next week is the March 2025 @nf-co.re #hackathon! 🎉 With 44 local sites across 27 countries, this event is truly global 🌏🌏🌎 We have 992 people registered - so close to 1000! Register here: nf-co.re/events/2025/... 🎟 ✍️ If you still need convincing, here's a little video to whet your appetite 👩🏻‍💻
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nf-core @nf-co.re · 28/01/2025
It's fantastic seeing the number of local sites grow and grow for the upcoming @nf-co.re #hackathon ! 🎉 Already a new record and with better global spread than ever before 🌎🌏🌍 If you think you can host a site, tell us now! General registration opens in a few days 🎟 nf-co.re/events/2025/...
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nf-core @nf-co.re · 18/01/2025
This is an exciting one - the first @nf-co.re pipeline for remotely sensed satellite imagery 🛰️ alongside auxiliary data. It produces a set of trend files related to land-cover changes 🌍 Congrats to Felix Kummer and team on this milestone! 🎉
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nf-core @nf-co.re · 14/01/2025
We've just put up the first batch of local sites for the upcoming @nf-co.re #hackathon (March 2025) on the website: nf-co.re/events/2025/... We've had a great response so far, with 23 sites lined up (already a record!), but we'd love more! Are you able to book a meeting room for a local site?
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nf-core @nf-co.re · 21/11/2024
Sarek already supports DragMap, so it should be pretty easy to look for differences.. nf-co.re/sarek/output In fact there was some discussion of this in the recent-ish Sarek paper: doi.org/10.1093/narg...
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nf-core @nf-co.re · 18/09/2024
The @nf-co.re Slack org passed a pretty significant milestone a few hours ago: 🎉 WE JUST HIT 10,000 SLACK USERS! 🎉 What an incredible milestone! Thank you to all of your for being part of this amazing community! 💚
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nf-core @nf-co.re · 14/05/2024
This section goes on to chart the experiences of the #EuroFaang consortia and the benefits of gradual adoption of #Nextflow and @nf-co.re. The final result is nuanced and truthful and we hope it can provide a blueprint for other consortia.
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nf-core @nf-co.re · 14/05/2024
The second half of the paper describes the experience of the #EuroFaang consortia as they adopted @nf-co.re. We cover initial motivations and hurdles, with a figure showing how maintenance of community-owned pipelines can shift over time, a true superpower of @nf-co.re ✨
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nf-core @nf-co.re · 14/05/2024
In the introduction, we look into usage and citations of workflow managers. It's clear that their popularity is surging, notably those that are command-line tools. Citations of #Nextflow have especially jumped in recent years.. 📈
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nf-core @nf-co.re · 02/04/2024
The @nf-co.re pipelines are flexible by design, meaning that different groups can run the same pipeline in multiple ways. Interest groups can help to standardise usage across fields and disciplines.
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nf-core @nf-co.re · 17/10/2023
What a phenomenal Day 1 of the @nf-co.re #NextflowSummit hackathon! 🌟 Off to a great start, let's see what we can make happen for Day 2... 🚀
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