iiinova — where your digital self keeps evolving

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Phil Ewels @ewels.bsky.social · 02/04/2026

Super excited to be launching two things today: #RustQC 🦀🧬 and rewrites.bio 🚀 I used AI to rewrite 15 RNA-seq QC tools into a single Rust binary (I've never written any Rust). It ended up being over 60x faster. Here's the story 🧵 seqeralabs.github.io/RustQC/

seqeralabs.github.io

Welcome to RustQC

Fast quality control tools for sequencing data, written in Rust.

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Friederike Hanssen @rikehanssen.bsky.social · 13/03/2024

Finally got around to release a tiny pipeline together with Susanne Jodoin: github.com/qbic-pipelin... It takes VEP-annotated VCFs, filters them, and converts them to MAF format. Tested with @nf-co.re /sarek generated VCF files.

github.com

GitHub - qbic-pipelines/vcftomaf

Contribute to qbic-pipelines/vcftomaf development by creating an account on GitHub.

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nf-core @nf-co.re · 16/01/2024

The nf-core hackathon is back! Join us Mon 18th - Wed 20th March 2024 for 3 days of Nextflow and fun! In 2023 we supported local sites for the first time. With almost 20 volunteers organizing local sites around the world, they were a massive success.

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Phil Ewels @ewels.bsky.social · 18/12/2023

MultiQC v1.19 was just released - just in time for the holidays! 🎁 🎄 This release has a bunch of bug-fixes, with 9 different modules receiving tweaks and improvements 🛠️ The MultiQC core code also got a bit of sprucing up and spring cleaning 🧽🫧 Enjoy! github.com/ewels/MultiQ...

github.com

Release MultiQC version 1.19 · ewels/MultiQC

Highlights An early Christmas present 🎁 Happy holidays everyone! 🎄 This release is mostly bugfixes and minor additions, whilst we lay the groundwork for some bigger updates coming in the new yea...

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Friederike Hanssen @rikehanssen.bsky.social · 16/11/2023

A new release is out with a few new tools ✨ - 🔀 NGSCheckmate to find sample swaps - 🧬 Sentieon DNAScope Support - 📏 CNVKit Genemetrics - 🔬 BCFTools annotate Special shout-out to Grant Neilson, Simon Pearce, and Raquel Manzano for their first contributions 😍 and everyone that helped out!

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Chenxin Li, PhD @chenxinli2.bsky.social · 08/11/2023

Not enough people know about bioicons.com Open source vector graphics. Free alternatives to BioRender.

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nf-core @nf-co.re · 27/10/2023

Pipeline release! nf-core/airrflow v3.2.0 - nf-core/airrflow version 3.2.0 "Expecto patronum"! Please see the changelog: github.com/nf-core/airrflow/release…

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Luke Pembleton @lwpembleton.bsky.social · 22/10/2023

🎉 Massive shoutout to Seqera Labs for yet another incredible #NextflowSummit! 🙌 🌟 This is truly one of the best hybrid conference experiences. Here’s why: 1/🧵 📺 HQ Dual video: slides + the presenter. Clear visuals are so commonly overlooked with virtual conferences. 👏

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Luke Pembleton @lwpembleton.bsky.social · 19/10/2023

👏 Just caught @rikehanssen.bsky.social awesome talk at #NextflowSummit 2023! 🚀 Exploring nf-core/sarek's journey, evolution, and the exciting progress in optimisation 🧬 #Bioinformatics #Nextflow #Sarek

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Lasse Folkersen @folkersen.com · 25/09/2023

🧬🖥️ The Sarek pipeline from #nfcore deserves a lot more attention.! Input fastq, bams, crams, vcfs - get a full state-of-the-art analysis. Rare to see such well maintained and flexible software in the open domain, please support: www.biorxiv.org/content/10.1...

biorxiv.org

Scalable and efficient DNA sequencing analysis on different compute infrastructures aiding variant d...

bioRxiv - the preprint server for biology, operated by Cold Spring Harbor Laboratory, a research and educational institution

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Rob Syme @robsyme.bsky.social · 27/09/2023

The first community Advanced Nextflow training sessions come out today! Starting in a few hours, registrations here: nf-co.re/events/2023... Huge thanks to the @nf-co.re team. See you there!

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