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Monah Abou Alezz

@monahton.bsky.social
39 followers 127 following 9 posts

Postdoc researcher | Computational Biologist | Workshop Trainer Visit my portfolio: monahton.github.io/portfolio

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Monah Abou Alezz @monahton.bsky.social · 07/09/2026
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Reposted by Monah Abou Alezz
Trinobia @trinobia.bsky.social · 21/06/2026
Python is another essential programming language in Bioinformatics... Here are 10 free Python 🐍 and Bioinformatics 🧬related resources to help you learning and practicing Python A 🧵 #Python #pythonprogramming #Bioinformatics
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Trinobia @trinobia.bsky.social · 11/06/2026
We just wrapped up a hands-on scRNA-seq data analysis workshop for PhD students at @dkfz.bsky.social 🎉 From experimental design to biological interpretation, researchers worked through the complete single-cell analysis journey. #scRNAseq #SingleCellRNAseq #Bioinformatics #ComputationalBiology
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Trinobia @trinobia.bsky.social · 28/05/2026
NatChat is an R package that uses AI to summarize the latest articles across Nature journals. It helps you stay on top of the science without drowning in it. Built for researchers who value signal over noise. monahton.github.io/NatChat/ #RStats #Nature #PubMed #OpenScience #DataScience #AI
monahton.github.io
Chatting with Nature Journals Current Issue using a local Language Model
The goal of NatChat is to provide fast, local-language-model-powered summaries of articles from the current issues of Nature journals, making cutting-edge science more accessible and digestible. The p...
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Reposted by Monah Abou Alezz
Trinobia @trinobia.bsky.social · 14/05/2026
1/ Why does my code run perfectly, but the results make zero sense? 😅 #Bioinformatics #Research #DataScience #AIinScience #Genomics #RNAseq #ComputationalBiology #MachineLearning #Statistics #Reproducibility #OpenScience #Biology #Biotech #AcademicResearch #PhDLife #Science #AI
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Trinobia @trinobia.bsky.social · 04/05/2026
1/ Computational biology is no longer supporting research. It is setting the direction. Expectations for how we work in this field are changing fast. #ComputationalBiology #Bioinformatics #Research #LifeSciences #DataDriven #Trinobia
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Trinobia @trinobia.bsky.social · 30/04/2026
Another Trinobia workshop wrapped up last week 🎉 We delivered an online, hands-on training on Introduction to Python for Data Analysis for researchers and clinicians at the Max Delbrück Center for Molecular Medicine. @mdc-berlin.bsky.social Led by Dr. Monah Abou Alezz. #Trinobia #Python
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Monah Abou Alezz @monahton.bsky.social · 27/04/2026
Proud to have instructed this workshop at @dkfz.bsky.social Great to see this enthusiam for learning bioinformatics analyses on RNA-seq data from this group of PhD students, researchers, and clinicians.
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Monah Abou Alezz @monahton.bsky.social · 09/01/2026
Revisiting the literature and reflecting on how biomedical research has evolved, a consistent pattern emerges: Nothing is truly “not studied at all” anymore, but many things are poorly quantified, fragmented, or never integrated across datasets. #Bioinformatics #DataIntegration #ResearchLife
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Monah Abou Alezz @monahton.bsky.social · 23/07/2025
🎉 New paper out! Excited to share our latest work on the T/ILC potential of ex vivo–generated lymphoid progenitors and its relevance to immune reconstitution and cell therapy. Read it here: frontiersin.org/journals/imm... #Immunology #CellTherapy #StemCells #Tcells #ILCs #Hematopoiesis
frontiersin.org
Frontiers | Ex vivo-generated lymphoid progenitors encompass both T cell and innate lymphoid cell fates
IntroductionWe previously established a feeder-free cell therapy platform for the ex vivo generation of lymphoid-primed progenitors using immobilized Delta-l...
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Monah Abou Alezz @monahton.bsky.social · 16/06/2025
I had the pleasure of delivering the first training event of the Marie Skłodowska-Curie Doctoral Network #MiCCrobioTAckle, at Leibniz Institute for Natural Product Research and Infection Biology–Hans Knöll Institute in beautiful Jena, Germany #MiCCrobioTAckle #MarieCurieFellows #DoctoralTraining
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Monah Abou Alezz @monahton.bsky.social · 12/06/2025
📚Want to keep up with the Nature journals latest articles without the overwhelm? 👉 Try NatChat: a new #RStats package 📦 Inspired by Stephen Turner’s 'biorecap' R package, NatChat use AI to summarize all abstracts from a current issue of any Nature journal. 🔗https://monahton.github.io/NatChat/
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Anna Kajaste-Rudnitski Lab @kajastelab.bsky.social · 18/04/2025
We are super excited to share our work on #InnateImmune sensing of #AAV 🦠🧬 in the 🧠, just out in @natcomms.nature.com ! 🤩 Huge congratulations to all the team and collaborators 💪🏻 And our funders 💰 @erc.europa.eu #FondazioneTelethon and #FNIH 🙏🏻 www.nature.com/articles/s41...
nature.com
AAV vectors trigger DNA damage response-dependent pro-inflammatory signalling in human iPSC-derived CNS models and mouse brain
Nature Communications - Costa-Verdera et. al describe a mechanism by which AAV vector genomes activate P53-mediated signalling in CNS cells involving downstream STING activation and...
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bioRxiv Bioinfo @biorxiv-bioinfo.bsky.social · 01/02/2025
What is a differentially expressed gene? www.biorxiv.org/content/10.1101/202…
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