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Matthias Blum

@matthiasblum.bsky.social

Pfam/InterPro software project leader @ebi.embl.org. Interested in biology, data visualization, and reinventing the wheel.

Posts Replies Media

Reposted by Matthias Blum

Bioinformatics Advances @bioinfoadv.bsky.social · 08/06/2026

Recently published in Bioinformatics Advances: "InterProScan 6: A modern large-scale protein function annotation pipeline" Find it here: doi.org/10.1093/bioadv/vbag141 Authors include: @matthiasblum.bsky.social, @alexbateman1.bsky.social

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Reposted by Matthias Blum

Nicola Bordin @nbordin.bsky.social · 28/04/2025

Our latest preprint is out on bioRxiv! A collaboration between the groups of @martinsteinegger.bsky.social , David Jones and Christine Orengo, we clustered AlphaFold Database and ESMatlas, a whopping 821 million proteins! We reveal biome-specific groups & over 11k novel domain combinations.

biorxiv.org

Metagenomic-scale analysis of the predicted protein structure universe

Protein structure prediction breakthroughs, notably AlphaFold2 and ESMfold, have led to an unprecedented influx of computationally derived structures. The AlphaFold Protein Structure Database now prov...

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