Sign in

Margaret Lam

@margaretlam.bsky.social
79 followers 41 following 0 posts

Research Fellow at Monash University - microbial genomics, Klebsiella, Acinetobacter, plasmids

PostsRepliesMedia
Reposted by Margaret Lam
Kim Walker @drwalkermsbanta.bsky.social · 18/12/2025
The latest in our quest to understand the role of HMV and hypercapsule in convergent Klebsiella is out! So thankful to this team for making this project really fun! @stphnslsbry.bsky.social @leslieannaerobe.bsky.social @margaretlam.bsky.social @katholt.bsky.social journals.asm.org/doi/10.1128/...
journals.asm.org
The acquisition of rmpADC can increase virulence of classical Klebsiella pneumoniae in the absence of other hypervirulence-associated genes | mBio
Klebsiella pneumoniae is a global pathogen, and gene exchange between hypervirulent (hvKp) and classical (cKp) strains is a rising threat. It is essential to understand how hvKp genes impact virulence phenotypes and identify the cKp strain backgrounds most amenable to enhanced virulence. Hypermucoviscosity (HMV) is a critical virulence factor in hypervirulent K. pneumoniae, conferred by the rmpADC locus. The rmp genes are encoded on mobile genetic elements and have been detected in convergent antibiotic-resistant K. pneumoniae strains of concern. In this study, we explored the impact of rmp acquisition in a broad set of classical clinical isolates. We observed that HMV appears necessary, but not sufficient, for increased virulence. Sequence type, capsule type, and HMV capacity could not predict which classical isolates gain an rmp-dependent colonization benefit. These insights increase our understanding of the distinctions between cKp and hvKp and further our ability to identify and treat new strains of concern.
074
Reposted by Margaret Lam
sylvain Brisse @sylvainbrisse.bsky.social · 30/11/2025
Huge preprint if you are interested in bacterial strain taxonomy! The why and how of cgMLST LIN codes: An extensively revised and expanded version doi.org/10.1101/2024... I will summarize it for you in this thread 👇
doi.org
Life Identification Numbers: A bacterial strain nomenclature approach
Unified strain taxonomies are needed for the epidemiological surveillance of bacterial pathogens and international communication in microbiological research. Core genome multilocus sequence typing (cg...
36036
Reposted by Margaret Lam
Marit Hetland @genomarit.bsky.social · 16/09/2025
Thrilled to share this preprint on Klebsiella pneumoniae plasmids in a One Health setting 🦠 Fantastic work by @twinkler.bsky.social! 🎉 @irenlohr.bsky.social @margaretlam.bsky.social
01911
Reposted by Margaret Lam
Joe Wanford @jwanford.bsky.social · 15/09/2025
I want to thank all of my fantastic collaborators their help and support with this work @codendall.bsky.social @neisseriaspanin.bsky.social @margaretlam.bsky.social @katholt.bsky.social @josebengoechea.bsky.social (+ many others not on bluesky)
111
Reposted by Margaret Lam
Hugh Cottingham @hughcottingham.bsky.social · 30/07/2025
Pleased to say that our preprint benchmarking Nanopore data for MLST, cgMLST, cgSNP & AMR typing from bacterial isolates is out! TL;DR you can get almost perfect results from 50x depth using live SUP basecalling with a GPU in under 20 hours #microsky#IDsky 🦠🧬🖥️ /1 www.medrxiv.org/content/10.1...
34629
Reposted by Margaret Lam
Mehrad Hamidian @mehrad-hamidian.bsky.social · 13/05/2025
🚨 New preprint out! Pan-Genus Analysis and Typing of AMR Plasmids in Acinetobacter Here, is the link: doi.org/10.21203/rs.... #AMR #Acinetobacter @liamtobin1.bsky.social @margaretlam.bsky.social @aimi-uts.bsky.social
doi.org
Pan-Genus Analysis and Typing of Antimicrobial Resistance Plasmids in Acinetobacter
Plasmids play a central role in horizontal gene transfer and bacterial adaptation, especially in the context of antimicrobial resistance (AMR) among opportunistic pathogens. Some members of the genus ...
154
Reposted by Margaret Lam
Ben Vezina @bananabenana.bsky.social · 29/07/2025
New preprint where we analysed IS loads in 🦠 #Klebsiella pneumoniae lineages and found they're inversely associated with nutrient usage. We propose an insertional tolerance model, whereby IS can only insert into metabolically-tolerable sites. #IDSky #MicroSky 🧪 www.biorxiv.org/content/10.1...
Graph showing IS loads by Klebsiella sub-lineage
1188
Reposted by Margaret Lam
KlebNET-GSP @klebnet.bsky.social · 21/05/2025
We are pleased to launch the KlebNET Genomic Epidemiology Consortium! We aim to build a public metadata repository; systematic risk framework for global genomic surveillance; and genomic epi reviews for high-impact #Klebsiella clones. Join us here: klebnet.org/klebnet-gsp-... #ABPHM25
klebnet.org
KlebNET-GSP
01416