Sign in

Lorenzo Bertolini

@lorenzoscottb.bsky.social
3.2K followers 664 following 59 posts

Researcher at the European Commission Joint Research Centre (JRC). Multimodality & interpretability in AI for health. Occasionally, AI for dream research. All views are my own lorenzoscottb.github.io

PostsRepliesMedia
Lorenzo Bertolini @lorenzoscottb.bsky.social · 10/07/2026
www.biorxiv.org/content/10.6...
biorxiv.org
Evo 2′s Perception of Single Nucleotide Substitutions in the Genes of Two Plant Model Organisms
Although DNA Large Language Models (DNA-LLMs) offer a path to decoding genetic complexity, our ability to evaluate these models is constrained by our incomplete understanding of the very same genetic ...
010
Lorenzo Bertolini @lorenzoscottb.bsky.social · 22/05/2026
Hello #sleeppeeps, our latest work on AI for dream report analysis is finally out (with attached pre-trained models). In the work, we show how small generative LLMs can be easily trained to efficiently annotate dream reports in a more dynamic manner. link.springer.com/chapter/10.1...
link.springer.com
PreDA: Prefix-Based Dream Reports Annotation with Generative Language Models
Dream reports are recollections of our experiences while asleep, and have strong research and clinical value. Since their analysis can be extremely time-consuming, researchers have adopted multiple ty...
021
Reposted by Lorenzo Bertolini
Adriana Michalak, PhD @dr-adri.bsky.social · 24/03/2026
💤𝗛𝗼𝘁 𝗼𝗳𝗳 𝘁𝗵𝗲 𝗽𝗿𝗲𝘀𝘀💤 Our findings indicate that 𝘀𝘂𝗯𝗷𝗲𝗰𝘁𝗶𝘃𝗲 𝘀𝗹𝗲𝗲𝗽 𝗱𝗲𝗽𝘁𝗵 is not solely determined by reduced brain activity. 𝗜𝗺𝗺𝗲𝗿𝘀𝗶𝘃𝗲 𝗱𝗿𝗲𝗮𝗺 𝗲𝘅𝗽𝗲𝗿𝗶𝗲𝗻𝗰𝗲𝘀 appear to maintain the 𝘀𝘂𝗯𝗷𝗲𝗰𝘁𝗶𝘃𝗲 𝘀𝗲𝗻𝘀𝗲 𝗼𝗳 𝗱𝗲𝗲𝗽 𝘀𝗹𝗲𝗲𝗽 as 𝗵𝗼𝗺𝗲𝗼𝘀𝘁𝗮𝘁𝗶𝗰 𝘀𝗹𝗲𝗲𝗽 𝗽𝗿𝗲𝘀𝘀𝘂𝗿𝗲 naturally declines across the night. dx.plos.org/10.1371/jour...
dx.plos.org
Immersive NREM2 dreaming preserves subjective sleep depth against declining sleep pressure
Perceived sleep depth is generally thought to reflect reduced brain activity. This study shows that this relationship weakens during dreaming, suggesting that dreaming helps sustain the subjective exp...
161
Lorenzo Bertolini @lorenzoscottb.bsky.social · 08/01/2026
👋 #sleeppeeps, this weekend I’ll be at the DxE simposyum at MIT to present some preliminary work at the intersection of AI and neuroscience to trace #dream event in event #EEG signal. Come say hi at the event, or drop a line if you’re in the Boston area and wanna chat 😀 dxe.framer.website
dxe.framer.website
Dream x Engineering Symposium
A gathering of world leaders in sleep and dream science exploring how we can influence dreaming with precision to improve well-being, accelerate learning, and treat clinical conditions.
030
Lorenzo Bertolini @lorenzoscottb.bsky.social · 17/11/2025
All the models are back online, and the full paper should be out soon too 😃 huggingface.co/collections/... #sleeppees #dream
huggingface.co
PreDA - a DReAMy-lib Collection
generative models for multi-feature annotation
031
Lorenzo Bertolini @lorenzoscottb.bsky.social · 03/08/2025
Unserious post: Now that (some) #AI researchers and engineers have rockstars-level salaries and notoriety, will they also have stage (or, better, paper) names?
021
Lorenzo Bertolini @lorenzoscottb.bsky.social · 01/08/2025
Made it alive and well to the last day of #ACL2025NLP? Hats off you to you (well…us…)!!! Time to collect the last energy and pass by our poster this afternoon 😀
010
Lorenzo Bertolini @lorenzoscottb.bsky.social · 27/07/2025
Not pressing _this_ work at #ACL2025NLP, but always happy to chat NLP/AI for dream analysis 😴🤖
020
Lorenzo Bertolini @lorenzoscottb.bsky.social · 25/07/2025
I’ll be at #ACL2025NLP next week, with a paper for the #GeBNLP workshop! In this work, we tested the ability of a task-level explainability method to trace biological-sex biases in medical image classification, using general and biomedical VLMs. @aclmeeting.bsky.social @genderbiasnlp.bsky.social
130
Lorenzo Bertolini @lorenzoscottb.bsky.social · 23/07/2025
👋 #sleeppeeps In this new work, we show how multiple LLMs appear to easily process #dreams, and reflect previously observed differences in reports (e.g., male-female, blind-sighted). We also argue for caution linking dreams and bizarreness when using #LLMs www.frontiersin.org/journals/sle...
frontiersin.org
Frontiers | Dreams are more “predictable” than you think
IntroductionA growing body of work has used machine learning and AI tools to analyse dream reports, and compare them to other textual content. Since these to...
071
Lorenzo Bertolini @lorenzoscottb.bsky.social · 27/06/2025
Happy to share that our work on #conformalprediction for pulmonary nodule detection has been accepted for presentation at COPA 25 conference!
000
Lorenzo Bertolini @lorenzoscottb.bsky.social · 10/06/2025
www.nature.com/articles/s41...
nature.com
An epidemiological knowledge graph extracted from the World Health Organization’s Disease Outbreak News - Scientific Data
Scientific Data - An epidemiological knowledge graph extracted from the World Health Organization’s Disease Outbreak News
020
Lorenzo Bertolini @lorenzoscottb.bsky.social · 15/05/2025
Introducing PreDA (prefix-based dream annotation), a set of generative LLMs tuned to annotate dream reports for 6 Hall & Van De Castle features! The paper will be presented at LOD 25 conference later this year as a long contribution. Models available here huggingface.co/jrc-ai #sleeppeeps #dream
021
Reposted by Lorenzo Bertolini
arxiv cs.CV @arxiv-cs-cv.bsky.social · 31/12/2024
Roel Hulsman, Valentin Comte, Lorenzo Bertolini, Tobias Wiesenthal, Antonio Puertas Gallardo, Mario Ceresa Conformal Risk Control for Pulmonary Nodule Detection arxiv.org/abs/2412.20167
051
Reposted by Lorenzo Bertolini
Adriana Michalak, PhD @dr-adri.bsky.social · 18/12/2024
💤 As I approach the end of my PostDoc at IMT Lucca, I’m looking for a new job! 🧠 Ideally: Research roles related to sleep/dream/consciousness/cognitive science. 🤖 Open to scientific writing & data analysis, too. 📍 Milan, nearby areas, or Switzerland. DMs open 💃🏼
0106
Reposted by Lorenzo Bertolini
Adriana Michalak, PhD @dr-adri.bsky.social · 09/12/2024
Contribute to our Research Topic "Understanding conscious experiences during sleep"! 💤 🧠 💤 Deadlines: Manuscript Summary Submission: 20.12.24 Manuscript Submission: 28.02.25 www.frontiersin.org/research-top... #consciousexperiences #sleep #REMdreams #NREMdreams #DreamEngineering #Hypnagogia
frontiersin.org
Understanding conscious experiences during sleep
Emerging research suggests that elements of awareness persist throughout various sleep stages, challenging conventional notions of unconsciousness during sleep. This dynamic and enigmatic interplay of...
062
Reposted by Lorenzo Bertolini
Tomer Ullman @tomerullman.bsky.social · 01/12/2024
thinking of calling this "The Illusion Illusion" (more examples below)
601570381
Reposted by Lorenzo Bertolini
François Fleuret @francois.fleuret.org · 26/11/2024
My deep learning course at the University of Geneva is available on-line. 1000+ slides, ~20h of screen-casts. Full of examples in PyTorch. fleuret.org/dlc/ And my "Little Book of Deep Learning" is available as a phone-formatted pdf (nearing 700k downloads!) fleuret.org/lbdl/
461253247
Reposted by Lorenzo Bertolini
Thomas Wolf @thomwolf.bsky.social · 24/11/2024
It's Sunday morning so taking a minute for a nerdy thread (on math, tokenizers and LLMs) of the work of our intern Garreth By adding a few lines of code to the base Llama 3 tokenizer, he got a free boost in arithmetic performance 😮 [thread]
527134
Reposted by Lorenzo Bertolini
Trish Greenhalgh @trishgreenhalgh.bsky.social · 24/11/2024
Reproducing my thread from the Other Place on our Lancet paper 'Long COVID - a clinical update'. Coauthors Manoj Sivan, Alice Perlowski, Janko Nikolich. 1/ www.thelancet.com/journals/lan...?
thelancet.com
Long COVID: a clinical update
Post-COVID-19 condition (also known as long COVID) is generally defined as symptoms persisting for 3 months or more after acute COVID-19. Long COVID can affect multiple organ systems and lead to sever...
831313557
Reposted by Lorenzo Bertolini
il Post @ilpost.it · 21/11/2024
E quindi come si sta da queste parti?
22669252
Reposted by Lorenzo Bertolini
AmsterdamNLP @amsterdamnlp.bsky.social · 10/11/2024
Work in progress -- suggestions for NLP-ers based in the EU/Europe & already on Bluesky very welcome! go.bsky.app/NZDc31B
517220
Lorenzo Bertolini @lorenzoscottb.bsky.social · 20/11/2024
Hi alI quick dataset question: I’m looking for a collection of histopathological images (no specific requirements wrt organ/disease/task) which includes metadata on participants’ (approximate) age. Any suggestion?
140
Reposted by Lorenzo Bertolini
Manlio De Domenico @manlius.bsky.social · 15/11/2024
As a computational social scientist I could not miss to follow this beautiful creature: the BlueSky social network during its growth in the last hours! In this video I show just a snapshot for about 210k users and their 500k-ish connections #academicsky Zoom in the next post youtu.be/JcmYZtWGnjQ
youtu.be
The “great Xodus” and the growth of BlueSky
YouTube video by Manlio De Domenico
67032
Lorenzo Bertolini @lorenzoscottb.bsky.social · 12/11/2024
Nice to see so many new #sleeppeeps on #SleepSky! I’m just gonna leave this here again 😅 (btw the paper and DReAMy abstract have now been published!)
041
Reposted by Lorenzo Bertolini
Christopher Manning @chrmanning.bsky.social · 10/11/2024
Papers at #EMNLP2024 #1 Statistical Uncertainty in Word Embeddings: GloVe-V Neural models, from word vectors through transformers, use point estimate representations. They can have large variances, which often loom large in CSS applications. Tue Nov 12 15:15-15:30 Flagler
05713
Reposted by Lorenzo Bertolini
Maike Osborne @maosbot.bsky.social · 09/11/2024
New here? Interested in AI/ML? Check out these great starter packs! AI: go.bsky.app/SipA7it RL: go.bsky.app/3WPHcHg Women in AI: go.bsky.app/LaGDpqg NLP: go.bsky.app/SngwGeS AI and news: go.bsky.app/5sFqVNS You can also search all starter packs here: blueskydirectory.com/starter-pack...
66557212
Reposted by Lorenzo Bertolini
Juan Diego Rodriguez @juand-r.bsky.social · 08/11/2024
How do language models organize concepts and their properties? Do they use taxonomies to infer new properties, or infer based on concept similarities? Apparently, both! 🌟 New paper with my fantastic collaborators @amuuueller.bsky.social and @kanishka.bsky.social
Title: "Characterizing the Role of Similarity in the Property Inferences of Language Models"
Authors: Juan Diego Rodriguez, Aaron Mueller, Kanishka Misra

Left figure: "Given that dogs are daxable, is it true that corgis are daxable?" A language model could answer this either using taxonomic relations, illustrated by a taxonomy dog-corgi, dog-mutt, canine-wolf, etc., or by similarity relations (dogs are more similar to corgis than cats, wolves or shar peis).

Right figure: illustration of the causal model (and an example intervention) for distributed alignment search (DAS), which we used to find a subspace in the network responsible for property inheritance behavior. The bottom nodes are "property", "premise concept (A)" and "conclusion concept (B)" , the middle nodes are "A has property P", "B is a kind of A", and the top node is "B has property P".
410822
Lorenzo Bertolini @lorenzoscottb.bsky.social · 05/06/2024
Sad to miss the #neuroscience of #dreaming summers school and the opportunity to chat about #NLP and #LLMs for #dream research. If you're interested, check out dreamy's tutorials on the Git page (also available on Google Colab) 😀 github.com/lorenzoscott...
github.com
GitHub - lorenzoscottb/DReAMy: DReAMy: a library for dream-reports annotation methods with python, NLP, and LLMs
DReAMy: a library for dream-reports annotation methods with python, NLP, and LLMs - lorenzoscottb/DReAMy
031
Lorenzo Bertolini @lorenzoscottb.bsky.social · 23/05/2024
👋 #SleepPeeps, happy to share DReAMy's new feature! Do you need to anonymise #dream reports? We've got you covered, with anonymized, a 1-line solution to find and replace entities. Try it out in our tutorial section, or online colab.research.google.com/drive/14hHRRC3…
010
Lorenzo Bertolini @lorenzoscottb.bsky.social · 11/04/2024
Hello friends and #sleeppeeps, later this month I will be giving an talk on my (and relevant) work on #NLP, #LLMs and #dreams. Catch it of you're interested
010
Lorenzo Bertolini @lorenzoscottb.bsky.social · 16/03/2024
Hello #sleeppeeps, the published version of our work is finally out! Have a read if you're interested in NLP and LLMs for automatic dream content analysis! aclanthology.org/2024.clpsych...
aclanthology.org
Automatic Annotation of Dream Report’s Emotional Content with Large Language Models
Lorenzo Bertolini, Valentina Elce, Adriana Michalak, Hanna-Sophia Widhoezl, Giulio Bernardi, Julie Weeds. Proceedings of the 9th Workshop on Computational Linguistics and Clinical Psychology (CLPsych ...
063
Lorenzo Bertolini @lorenzoscottb.bsky.social · 18/02/2024
DReAMy abstract's finally out on SleepMedicine (WorldSleep 23)! www.sciencedirect.com/science/arti...
sciencedirect.com
DReAMy: a library for the automatic analysis and annotation of dream reports with multilingual large language models
011
Lorenzo Bertolini @lorenzoscottb.bsky.social · 31/01/2024
Hello #sleeppeeps, happy to share that our paper "Automatic Annotation of #Dream Report’s Emotional Content with Large Language Models" was accepted for publication at #EACL2024 Computational Linguistic and Clinical Psychology Workshop! Here's a short 🧵
100
Reposted by Lorenzo Bertolini
Carl T. Bergstrom @carlbergstrom.com · 14/12/2023
There's a curious new rhetorical strategy I'm encountering more and more often in online spaces wherein ignorance about a claim is taken to refute it. It goes a bit like the script below. It's the death-of-expertise script, but with an additional twist. Has anyone written about this?
Approach A has problem B.

You’re wrong and I’m not going to fall for that.

Why do you say that?

Because I don’t know enough about A or B to draw that conclusion, and I’m an Open-Minded Thinker.

Oh, so you’re not saying that you disagree, you’re saying that you don’t know.

No, you’re wrong. You say A has problem B — but without knowing about A and B, it’s obvious I can’t conclude that. 

So A and B is what I happen to work on. 

Now you are bullying me with credentialism.

Not at all. I just wanted to suggest some background that will explain why A has problem B.

I know better than to read that background.  

What? Why? 

You’re the one claiming A has problem B. So I’m not going to trust your evidence for anything.  I’m not One Of Those Easy Dupes.
2219641
Lorenzo Bertolini @lorenzoscottb.bsky.social · 13/11/2023
Mondays are so much better when you wake up to interesting experimental results!
000
Lorenzo Bertolini @lorenzoscottb.bsky.social · 02/11/2023
Hello #sleepPeeps, we've uploaded DReAMy's abstract, in case you missed the #WorldSleep23 presentation. You can also find my (very verbose) poster from #ESRS #eSLEEP congress, on training generative #LLMs for dream report annotation 😀
researchgate.net
(PDF) DReAMy: A library for the automatic analysis and annotation of dream reports with multilingual...
PDF | INTRODUCTION: Dream researchers have long faced the challenge of consistently and automatically annotating large sets of textual reports... | Find, read and cite all the research you need on Res...
011
Lorenzo Bertolini @lorenzoscottb.bsky.social · 24/10/2023
Quite amazing to see people are already using DReAMy in the their research at #WorldSleep2023 !!! Don't forget to stop by DReAMy's oral presentation (Room A07, 4:58) if you want to learn more about #LLMs for #dream reports analysis and annotation!
020
Lorenzo Bertolini @lorenzoscottb.bsky.social · 24/10/2023
Hey #SleepPeeps, this is your friendly reminder to pass by our presentation later this afternoon, if you're at #WorldSleep2023
010
Lorenzo Bertolini @lorenzoscottb.bsky.social · 19/10/2023
Hello #sleeppeeps! #WorldSleep2023 is a day away. Don't forget to stop by our oral presentation. We'll talk about our experiments with #LLMs on #dream reports, the library itself, and how to use it. Don't #sleep on it 😀
010
Lorenzo Bertolini @lorenzoscottb.bsky.social · 12/10/2023
On a non-so-sciency note, we're planning on handing out some DReAMy stickers at #WorldSleep23 ! #scisky #sleeppeeps
020
Lorenzo Bertolini @lorenzoscottb.bsky.social · 06/10/2023
👀
011
Lorenzo Bertolini @lorenzoscottb.bsky.social · 06/10/2023
Hello, #SleepSky, #SleepPeeps, and #dream researchers. It's nice to see many of you here, and reciprocating the interest of a curious #NLP/#AI researcher. So I thought to do a quick thread about my interested dreams and sleep, and what I've done so far!
141
Lorenzo Bertolini @lorenzoscottb.bsky.social · 04/10/2023
Hi #sleeppeeps, I will be around #eSLEEPEurope23 virtual congress this week. Shout out if you want to chat about #NLP and #LLMs for #dream analysis during one of the breaks 😀
000
Lorenzo Bertolini @lorenzoscottb.bsky.social · 03/10/2023
Hello #sleeppeeps and #SciSky! Later this week, DReAMy and I will be at #eSleepEurope23, with a poster on how to train generative #LLMs to annotate #dream reports for different Hall & Van de Castle features. You can find models and demo at huggingface.co/DReAMy-lib
010
Lorenzo Bertolini @lorenzoscottb.bsky.social · 02/10/2023
#HiSciSky, Lorenzo here! I am researcher at the European Commission's JRC, working on biomedical NLP. Before, I did a PhD and postdoc at Sussex Uni, where I focused on topics like compositionality, graph #ML, and dream analysis.
050