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Leonardo Dalla Porta

@ldallap.bsky.social
229 followers 547 following 82 posts

Systems Neuroscience. Into brain states and their transitions. ldallap.github.io

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Leonardo Dalla Porta @ldallap.bsky.social · 01/10/2026
How do collective dynamics self-organize in the occipital cortex in blindness? For all those interested in neuronal oscillations: Lack of vision shifts occipital dynamics toward a frontal-like regime and enhances top-down connectivity www.biorxiv.org/content/10.6...
biorxiv.org
Lack of vision shifts occipital dynamics toward a frontal-like regime and enhances top-down connectivity
The human occipital cortex is robustly repurposed for non-visual cognition after blindness, yet it remains unknown whether this functional reassignment is accompanied by a fundamental retuning of its ...
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Leonardo Dalla Porta @ldallap.bsky.social · 04/09/2026
Keep one eye here! Highly recommended!
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Leonardo Dalla Porta @ldallap.bsky.social · 03/09/2026
That’s fantastic, Joao. 🎉🎉🎉
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Leonardo Dalla Porta @ldallap.bsky.social · 02/09/2026
Looking forward to reading it. Congrats!!!
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Leonardo Dalla Porta @ldallap.bsky.social · 21/08/2026
Human cortical dynamics reflect graded contributions of local geometry and network topography www.nature.com/articles/s41...
nature.com
Human cortical dynamics reflect graded contributions of local geometry and network topography - Nature Communications
Royer and colleagues find a principal dimension of neural dynamic similarity dissociating unimodal and association cortices. Systematic variations in local and macroscale constraints across the cortex...
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Leonardo Dalla Porta @ldallap.bsky.social · 11/08/2026
neurosciencenews.com/acetylcholin...
neurosciencenews.com
Receptor Density Shapes Whole-Brain Network Dynamics - Neuroscience News
Researchers uses The Virtual Brain platform to link acetylcholine receptor density to whole-brain dynamics and localized slow waves.
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Reposted by Leonardo Dalla Porta
Demetrio Ferro @d-ferro.bsky.social · 28/07/2026
Excited to share our latest publication, out now in @natcomms.nature.com !🧠🔍 Accumulating virtual rewards enhances both decision-making accuracy and neural value encoding in dorsal anterior cingulate cortex by dynamically shifting a goal-dependent internal reference point. doi.org/10.1038/s414...
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Leonardo Dalla Porta @ldallap.bsky.social · 23/07/2026
Full paper (open-access) here: pnas.org/doi/10.1073/... Special thanks to the collaborators @janfousek.bsky.social, Alain Destexhe, and Mavi Sanchez-Vives. Happy to discuss the broader implications and how we can exploit this framework even further! @idibaps.bsky.social #computationalneuroscience
pnas.org
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Leonardo Dalla Porta @ldallap.bsky.social · 23/07/2026
To sum it all up: Heterogeneity isn't just random noise; it's spatially structured. It’s the precise spatial landscape of intrinsic properties, and how it maps onto the connectome, that optimizes synchrony, communication, and state flexibility across the brain.
doi.org
Sleep-like cortical dynamics during wakefulness and their network effects following brain injury - Nature Communications
In this Perspective, the authors propose that brain injury can result in sleep-like slowing of cortical EEG waves during wakefulness. The generation of these dynamics and their effects on brain networ...
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Leonardo Dalla Porta @ldallap.bsky.social · 23/07/2026
Lastly, we also explored an intriguing case: the coexistence of local sleep-like dynamics in an otherwise "awake" brain (e.g., doi.org/10.1038/s414...). We showed that the coexistence of brain states highlights the joint action of both local adaptation and global connectivity.
doi.org
Sleep-like cortical dynamics during wakefulness and their network effects following brain injury - Nature Communications
In this Perspective, the authors propose that brain injury can result in sleep-like slowing of cortical EEG waves during wakefulness. The generation of these dynamics and their effects on brain networ...
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Leonardo Dalla Porta @ldallap.bsky.social · 23/07/2026
In other words, our work bridges two foundational scales of brain organization that are usually studied separately: 1⃣Microscale: Intrinsic local excitability (receptor maps) 2⃣Macroscale: Large-scale structural connectivity (the connectome)
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Leonardo Dalla Porta @ldallap.bsky.social · 23/07/2026
All three null models performed worse and brought us to the core message of our paper: ➡️It’s not enough for the brain to just be heterogeneous; to be fully exploited, that heterogeneity must be aligned with the connectome!
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Leonardo Dalla Porta @ldallap.bsky.social · 23/07/2026
But, improved relative to what? The obvious baseline is the homogeneous case, and yes, the model outperforms it. We also tested other null models, such as Random values, a Gaussian distribution of values, and spin-rotated maps (preserving spatial autocorrelation).
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Leonardo Dalla Porta @ldallap.bsky.social · 23/07/2026
So, after connecting all these pieces together, what do we actually get? Is the heterogeneous model better, and if so, in what ways? We looked at a few key aspects: 1⃣ Oscillations: It improves global synchrony! 2⃣ Communication: It enhances information flow (assessed by TE).
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Leonardo Dalla Porta @ldallap.bsky.social · 23/07/2026
We now have regions with different levels of intrinsic excitability. But how do they talk to each other? Well, the connectome! However, keep in mind that symmetry breaking is also driven by the SC itself (doi.org/10.1038/s415...).
doi.org
Symmetry breaking organizes the brain’s resting state manifold - Scientific Reports
Scientific Reports - Symmetry breaking organizes the brain’s resting state manifold
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Leonardo Dalla Porta @ldallap.bsky.social · 23/07/2026
Choosing this model allowed us to do two things: study brain state transitions and constrain the model with intrinsic features derived from CHRM receptors, thus modulating the adaptation variable. (Yes, we know that we are simplifying things here; see discussion in the paper).
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Leonardo Dalla Porta @ldallap.bsky.social · 23/07/2026
This choice was crucial for our purposes, as brain states are modulated by the level of neurotransmitters (doi.org/10.1016/j.ne...). As such, M1 receptors (M-current) are a target of acetylcholine, one of the main neurotransmitters implicated in the wake-sleep cycle.
doi.org
Redirecting
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Leonardo Dalla Porta @ldallap.bsky.social · 23/07/2026
So, we implemented these features into a mean-field (MF) model. But which one? MF models come in many flavors (doi.org/10.1038/nn.4...). We chose the AdEx MF model because it includes an adaptation variable (a negative self-feedback loop).
doi.org
Dynamic models of large-scale brain activity - Nature Neuroscience
Cognitive activity requires the collective behavior of cortical, thalamic and spinal neurons across large-scale systems of the CNS. This paper provides an illustrated introduction to dynamic models of...
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Leonardo Dalla Porta @ldallap.bsky.social · 23/07/2026
Yes, we know that their equivalence does not always match, which is not the case for M1 receptors, which indeed are correlated across these two modalities (doi.org/10.1016/j.ne...)
doi.org
Redirecting
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Leonardo Dalla Porta @ldallap.bsky.social · 23/07/2026
To do this, we relied on seminal works mapping neurotransmitter receptors via transcriptomics (doi.org/10.1038/natu...) and PET (doi.org/10.1038/s415...).
doi.org
An anatomically comprehensive atlas of the adult human brain transcriptome - Nature
Laser microdissection and microarrays are used to assess 900 precise subdivisions of the brains from three healthy men with 60,000 gene expression probes; the resulting atlas allows comparisons betwee...
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Leonardo Dalla Porta @ldallap.bsky.social · 23/07/2026
Building on this and our work on how M-current impacts local dynamics (doi.org/10.1371/jour...), we constrained a whole-brain model using these intrinsic features, i.e., muscarinic receptor maps.
doi.org
M-current modulation of cortical slow oscillations: Network dynamics and computational modeling
Author summary During slow wave sleep we are unconscious and disconnected from the outside world, while when we wake we are conscious of ourselves and the world around us. These two different brain st...
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Leonardo Dalla Porta @ldallap.bsky.social · 23/07/2026
Features such as E:I have already been shown to modulate large-scale brain activity (doi.org/10.1126/scia...), but here, we wondered about intrinsic properties. While E:I ratio defines the "communication" channels, intrinsic properties control regional excitability.
doi.org
Dynamical consequences of regional heterogeneity in the brain’s transcriptional landscape
Regional heterogeneity in the brain’s transcriptional landscape supports complex neuronal dynamics.
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Leonardo Dalla Porta @ldallap.bsky.social · 23/07/2026
But when looking at the whole-brain, we have to account for multiscale heterogeneity (cytoarchitecture, receptor distributions, topology, and more; e.g., doi.org/10.1038/s415...), all of which interact to shape the rich dynamics and rhythms of the brain.
doi.org
Towards a biologically annotated brain connectome - Nature Reviews Neuroscience
High-resolution maps of biological annotations in the brain are increasingly generated and shared. In this Review, Bazinet and colleagues discuss how brain connectomes can be enriched with biological ...
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Leonardo Dalla Porta @ldallap.bsky.social · 23/07/2026
We already know from neuronal populations that heterogeneity enhances information flow and activity propagation (e.g., doi.org/10.1038/s415... & doi.org/10.1016/j.ne...).
doi.org
Optimal responsiveness and information flow in networks of heterogeneous neurons - Scientific Reports
Scientific Reports - Optimal responsiveness and information flow in networks of heterogeneous neurons
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Leonardo Dalla Porta @ldallap.bsky.social · 23/07/2026
In our recent publication in @pnas.org , we show that at the scale of whole-brain organization, heterogeneity isn't random: the brain uses it in a structured, spatially organized way. www.pnas.org/doi/10.1073/...
pnas.org
Spatially structured heterogeneity shapes large-scale cortical dynamics in a model of the human cortex | PNAS
The human brain displays substantial spatial variability in molecular, anatomical, and physiological organization. Yet, how this heterogeneity shap...
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Leonardo Dalla Porta @ldallap.bsky.social · 23/07/2026
If there’s one thing biological systems aren't, it's homogeneous. It's common knowledge that heterogeneity is everywhere, from molecular scales to people. But is the fact of just being "different" what actually matters?
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Leonardo Dalla Porta @ldallap.bsky.social · 21/07/2026
Cortical traveling waves in time and space: Physics, physiology, and psychology www.sciencedirect.com/science/arti...
sciencedirect.com
Cortical traveling waves in time and space: Physics, physiology, and psychology
Widefield recordings acquired with different resolutions and in diverse species have revealed that cortical activity often propagates as waves of exci…
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Reposted by Leonardo Dalla Porta
Earl K. Miller @earlkmiller.bsky.social · 09/07/2026
Small-scale biological variation across regions plays a major role in organizing global rhythmic cortical dynamics. Spatially structured heterogeneity shapes large-scale cortical dynamics in a model of the human cortex doi.org/10.1073/pnas... #neuroscience
doi.org
Spatially structured heterogeneity shapes large-scale cortical dynamics in a model of the human cortex | PNAS
The human brain displays substantial spatial variability in molecular, anatomical, and physiological organization. Yet, how this heterogeneity shap...
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Leonardo Dalla Porta @ldallap.bsky.social · 09/07/2026
Spatially structured heterogeneity shapes large-scale cortical dynamics in a model of the human cortex www.pnas.org/doi/10.1073/...
pnas.org
PNAS
Proceedings of the National Academy of Sciences (PNAS), a peer reviewed journal of the National Academy of Sciences (NAS) - an authoritative source of high-impact, original research that broadly spans...
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Leonardo Dalla Porta @ldallap.bsky.social · 03/07/2026
Temporal fingerprints of TMS-evoked potentials across thalamocortical circuits www.biorxiv.org/content/10.6...
biorxiv.org
Temporal fingerprints of TMS-evoked potentials across thalamocortical circuits
Background: Electroencephalographic (EEG) potentials evoked by transcranial magnetic stimulation (TMS) offer a direct window into cortical dynamics. Yet, a systematic exploration of their morphologica...
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Leonardo Dalla Porta @ldallap.bsky.social · 23/06/2026
Functional Whole-Brain Models: A New Framework for Unifying Brain Structure and Cognitive Function Can we build functional whole-brain models integrating structural and dynamical realism with task-performing capacity? Check our new work here: arxiv.org/abs/2605.18118 Spearheaded by Mario Senden
arxiv.org
Functional Whole-Brain Models: A New Framework for Unifying Brain Structure and Cognitive Function
Contemporary computational neuroscience features two prominent modeling traditions. Bottom-up whole-brain modeling (WBM) builds biophysically detailed simulations of brain structure and dynamics, wher...
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Leonardo Dalla Porta @ldallap.bsky.social · 25/04/2026
I don’t think it is much money though. Eg, compare with war spending…
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Reposted by Leonardo Dalla Porta
Ross Williamson @rswilliamson.bsky.social · 03/04/2026
Excited to share a new paper from our lab, just in time for Easter, where we characterize how arousal modulates different excitatory cell-types in the auditory cortex! www.science.org/doi/10.1126/...
science.org
Pupil-linked arousal heterogeneously modulates cell-type–specific sensory processing
Two-photon imaging and pupillometry reveal how arousal modulates excitatory neuron subtypes in auditory cortex.
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Leonardo Dalla Porta @ldallap.bsky.social · 31/03/2026
I am proud to be part of this collaboration, spearheaded by my friend and collaborator Gianluca Gaglioti at Massimini’s lab, and in collab. w/ Simone Sarasso, Mavi Sanchez-Vives, Maurizio Corbetta, Gustavo Deco &+ Stay tuned, more to come!
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Leonardo Dalla Porta @ldallap.bsky.social · 31/03/2026
For more details and a thorough discussion, check our paper (open access): doi.org/10.1016/j.ne...
doi.org
Redirecting
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Leonardo Dalla Porta @ldallap.bsky.social · 31/03/2026
Thus, revealing a joint dependence on both structural location and temporal dynamics of these emergent SWs, and opens up testable hypotheses regarding intervention strategies aimed at recovering network-level alterations following brain lesions.
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Leonardo Dalla Porta @ldallap.bsky.social · 31/03/2026
Moreover, we highlight i) the hierarchical organization of cortical connectivity as a constraint on SW propagation, and ii) temporal coherence as a recruitment modulator of distant, structurally intact nodes.
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Leonardo Dalla Porta @ldallap.bsky.social · 31/03/2026
As in other models (e.g., Levenstein et al., 2019, Nat. Comm.; Cakan et al., 2022, Front.; &+), we show that these SWs can be generated through adaptation-related mechanisms (e.g., disruption of ascending fibers) and through disfacilitation (e.g., cortico-cortical disconnection).
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Leonardo Dalla Porta @ldallap.bsky.social · 31/03/2026
In our recent publication in NeuroImage (doi.org/10.1016/j.ne...), we developed a bottom-up computational model to explore the mechanisms underlying the generation and propagation of these waves following lesions.
doi.org
Redirecting
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Leonardo Dalla Porta @ldallap.bsky.social · 31/03/2026
Therefore, they could potentially represent a mechanistic substrate of diaschisis, brain deficits not directly related to the lesion site.
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Leonardo Dalla Porta @ldallap.bsky.social · 31/03/2026
This is particularly relevant because SW are known to interfere with information processing and have been linked to cognitive impairments (e.g., doi.org/10.1126/scie...).
doi.org
Breakdown of Cortical Effective Connectivity During Sleep
When we fall asleep, consciousness fades yet the brain remains active. Why is this so? To investigate whether changes in cortical information transmission play a role, we used transcranial magnetic st...
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Leonardo Dalla Porta @ldallap.bsky.social · 31/03/2026
During sleep, these waves are known to propagate through the cortex (e.g., doi.org/10.1523/jneu...), and so do those following brain lesions (although not exactly in the same manner; e.g., doi.org/10.1016/j.ne...).
doi.org
The Sleep Slow Oscillation as a Traveling Wave
During much of sleep, virtually all cortical neurons undergo a slow oscillation (<1 Hz) in membrane potential, cycling from a hyperpolarized state of silence to a depolarized state of intense firing. ...
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Leonardo Dalla Porta @ldallap.bsky.social · 31/03/2026
Recent evidence points to the emergence of slow waves, those associated with deep sleep, in cortical regions surrounding the lesion (e.g., doi.org/10.1038/s414...).
doi.org
Sleep-like cortical dynamics during wakefulness and their network effects following brain injury - Nature Communications
In this Perspective, the authors propose that brain injury can result in sleep-like slowing of cortical EEG waves during wakefulness. The generation of these dynamics and their effects on brain networ...
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Leonardo Dalla Porta @ldallap.bsky.social · 31/03/2026
For more than a century, the study of brain lesions has been central to understanding cognitive processes and normal brain function (e.g., Broca’s studies). However, what electrophysiological signatures emerge following a brain lesion?
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Leonardo Dalla Porta @ldallap.bsky.social · 09/02/2026
Congrats, Marco!!!
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Leonardo Dalla Porta @ldallap.bsky.social · 09/02/2026
Development of structure–function coupling in human brain networks during youth www.pnas.org/doi/10.1073/... Structure–function coupling in macroscale human brain networks www.nature.com/articles/s41...
pnas.org
Development of structure–function coupling in human brain networks during youth | PNAS
The protracted development of structural and functional brain connectivity within distributed association networks coincides with improvements in h...
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Leonardo Dalla Porta @ldallap.bsky.social · 03/02/2026
@overleaf.com Subscription overpriced; free version extremely downgraded from what it used to be.
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Leonardo Dalla Porta @ldallap.bsky.social · 28/01/2026
doi.org/10.1152/jn.1...
doi.org
Comparative electrophysiology of pyramidal and sparsely spiny stellate neurons of the neocortex | Journal of Neurophysiology | American Physiological Society
Slices of sensorimotor and anterior cingulate cortex from guinea pigs were maintained in vitro and bathed in a normal physiological medium. Electrophysiological properties of neurons were assessed with intracellular recording techniques. Some neurons were identified morphologically by intracellular injection of the fluorescent dye Lucifer yellow CH. Three distinct neuronal classes of electrophysiological behavior were observed; these were termed regular spiking, bursting, and fast spiking. The physiological properties of neurons from sensorimotor and anterior cingulate areas did not differ significantly. Regular-spiking cells were characterized by action potentials with a mean duration of 0.80 ms at one-half amplitude, a ratio of maximum rate of spike rise to maximum rate of fall of 4.12, and a prominent afterhyperpolarization following a train of spikes. The primary slope of initial spike frequency versus injected current intensity was 241 Hz/nA. During prolonged suprathreshold current pulses the frequency of firing adapted strongly. When local synaptic pathways were activated, all cells were transiently excited and then strongly inhibited. Bursting cells were distinguished by their ability to generate endogenous, all-or-none bursts of three to five action potentials. Their properties were otherwise very similar to regular-spiking cells. The ability to generate a burst was eliminated when the membrane was depolarized to near the firing threshold with tonic current. By contrast, hyperpolarization of regular-spiking (i.e., nonbursting) cells did not uncover latent bursting tendencies. The action potentials of fast-spiking cells were much briefer (mean of 0.32 ms) than those of the other cell types.(ABSTRACT TRUNCATED AT 250 WORDS)
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Leonardo Dalla Porta @ldallap.bsky.social · 28/01/2026
Neuroscience history: Were McCormick et al. (1985) the first to coin the terms "regular" and "fast" spiking? Comparative Electrophysiology of Pyramidal andSparsely Spiny Stellate Neurons of the Neocortex. J Neurophysiol.
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Reposted by Leonardo Dalla Porta
Mark D Humphries @markdhumphries.bsky.social · 30/12/2025
Just published my review of neuroscience in 2025, on The Spike. The 10th of these, would you believe? This year we have foundation models, breakthroughs in using light to understand the brain, a gene therapy, and more Enjoy! medium.com/the-spike/20...
medium.com
2025: A Review of the Year in Neuroscience
Enlightening the brain
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