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layerfmri.bsky.social

@layerfmri.bsky.social
1.1K followers 197 following 118 posts

I try to collect talks, papers, and news regarding layer-fMRI. Focusing on acquisition. researchers.mgh.harvard.edu/profile…

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Reposted by @layerfmri.bsky.social
Marco Barilari @marcobarilari.bsky.social · 10/09/2026
New preprint from the CPPlab - our first 7T MRI study How does sound reach the occipital cortex in early blind people? Using 7T VASO layer-fMRI, here the first functional sub-mm dataset in blind people to test if auditory motion engages hMT+/V5 layers via feedforward or feedback lnk.ua/kjYccwS9Y 🧵👇
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layerfmri.bsky.social @layerfmri.bsky.social · 20/08/2026
Exciting Postdoc opportunity on mesoscale fMRI: layerfmri.wordpress.com/wp-content/u...
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layerfmri.bsky.social @layerfmri.bsky.social · 29/07/2026
Clinical 7T gradients can go fast — but peripheral nerve stimulation (PNS) stops you at high-res fMRI. ⚡ Meet POPE 🌍: we reshape EPI pulses to dodge PNS exactly when it spikes → robust 0.3mm fMRI, seeing intracortical veins. 🧠 w/ @SiemensHealth 👉 doi.org/10.64898/202...
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Prof. Karin Shmueli's MRI Research Group @mri-phys-ks.bsky.social · 11/06/2026
Last chance to apply for the 2026 In Vivo Magnetic Resonance Gordon Research Conference! Deadline June 14 www.grc.org/in-vivo-magn... Join us July 12–17, NH, USA for frontier science, discussion, friendly community. Theme: Advancing Beyond Limits - Temporal, Quantitative, Functional & Translational
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layerfmri.bsky.social @layerfmri.bsky.social · 08/06/2026
Join us for the 7T Impulse Symposium at the Martinos Center, Nov. 5th, 2026. Program & Registration: education.martinos.org/impulse-symp... Location (in person): 114 16th street at Martinos Center Virtual access will be provided.
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layerfmri.bsky.social @layerfmri.bsky.social · 28/03/2026
Interested in understanding your high-res data better? @ofgulban.bsky.social enhanced LayNii IDA with some very useful QA and interactive viewing tools. In the last LayNii release. youtu.be/ipzCT57C7NE
youtu.be
LayNii IDA Devlog #002 – Quality controls and multi-image synchrony
YouTube video by ofgulban
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Reposted by @layerfmri.bsky.social
Imaging Neuroscience @imagingneurosci.bsky.social · 28/03/2026
New paper in Imaging Neuroscience by Sebastian Dresbach, Renzo Huber, et al: Laminar CBV and BOLD response characteristics over time and space in the human primary somatosensory cortex at 7T doi.org/10.1162/IMAG...
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Faruk Gulban @ofgulban.bsky.social · 11/03/2026
New LayNii v2.10.0 is out! github.com/layerfMRI/LA... 🚀 LN2_FRISGO: This program mitigates the Fuzzy Ripple artifacts in dual polarity 3D-EPI fMRI data. 💾 Big data ready: Now handling >5GB NIFTIs to support the mesoscopic shift toward high-res, whole-brain images. @layerfmri.bsky.social
github.com
Release LayNii v2.10.0 · layerfMRI/LAYNII
New programs LN2_FRISGO: This program corrects/mitigates the Fuzzy Ripple artifacts in dual polarity 3D-EPI fMRI data. LN2_ZSCORE: Simple z-scoring for time series data. LN2_DESPIKE: Developed mai...
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layerfmri.bsky.social @layerfmri.bsky.social · 05/03/2026
The recording is available now: youtu.be/rxhwAJFiTCk
youtu.be
Tuning your scanner for fMRI, a virtual ISMRM Brain function study group meeting
YouTube video by Layer fMRI
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Reposted by @layerfmri.bsky.social
Esther Kuehn @estherkuehn.bsky.social · 19/02/2026
Thanks for featuring my article on layer dependent changes across the lifespan, it was indeed unexpected that our layer 4 expands with age. Perhaps this holds therapeutic or preventive potential? Here is the associated link pmc.ncbi.nlm.nih.gov/articles/PMC...
pmc.ncbi.nlm.nih.gov
Layer-specific changes in sensory cortex across the lifespan in mice and humans
The segregation of processes into cortical layers is a convergent feature in animal evolution. However, how changes in the cortical layer architecture interact with sensory system function and dysfunction remains unclear. Here we conducted ...
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layerfmri.bsky.social @layerfmri.bsky.social · 03/02/2026
The ISMRM brain function study group is organizing an interesting virtual meeting on March 4th
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layerfmri.bsky.social @layerfmri.bsky.social · 29/12/2025
New layer-fMRI manuscript finding laminar response differences across orientation-tuned surround suppression. doi.org/10.64898/202... By Emerson et al
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layerfmri.bsky.social @layerfmri.bsky.social · 15/12/2025
New layer-fMRI paper on the hierarchical processing of auditory sequences. A 7T study with VASO. By Mu et al. www.nature.com/articles/s41...
nature.com
Cross-spatial scale processing of hierarchical auditory sequences in human brains revealed using 7 T magnetic resonance imaging - Nature Communications
Here, the authors integrate whole-brain and layer-fMRI activities to reveal the effectiveconnectivity between temporal and frontal cortices during hierarchical auditory processing.
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layerfmri.bsky.social @layerfmri.bsky.social · 01/12/2025
New auditory layer-fMRI manuscript finds that: -> deep layers contain content-specific predictions, -> superficial layers contain prediction–input alignment, -> all layers contain repetition suppression. By Haren et al. doi.org/10.1101/2025...
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Reposted by @layerfmri.bsky.social
Aperture Neuro @apertureohbm.bsky.social · 26/11/2025
In a satirical commentary, @ofgulban.bsky.social examines the widening gap between traditional publication norms and emerging channels of science communication: doi.org/10.52294/001... @ohbmofficial.bsky.social #FutureofPublishing #SpecialIssue
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layerfmri.bsky.social @layerfmri.bsky.social · 11/11/2025
Yesterday, @ofgulban.bsky.social gave a great talk about efficient imaging of small veins. It was inspiring. Impressive how much information is there waiting to be harvested. youtu.be/7wStzJNUXic?...
youtu.be
Faruk Gulban: Meso-Vessel Imaging with 7 T MRI
YouTube video by Layer fMRI
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Reposted by @layerfmri.bsky.social
Jonathan Wirsich @jwirsich.bsky.social · 07/11/2025
Check out our newest demonstrating feasabilty of sub-mm whole brain EEG-fMRI at 7T. Happy to have been part of this amazing collaboration and thank you so much to Cristina and João for leading this project 😊👍.
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layerfmri.bsky.social @layerfmri.bsky.social · 07/11/2025
New layer-fMRI preprint using deep sampling to track face information across layers in FFA. 50 times 15 min scanning with whole brain VASO and BOLD fMRI. By Kenshu Koiso et al. doi.org/10.1101/2025...
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layerfmri.bsky.social @layerfmri.bsky.social · 04/11/2025
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layerfmri.bsky.social @layerfmri.bsky.social · 04/11/2025
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layerfmri.bsky.social @layerfmri.bsky.social · 04/11/2025
We wrote a blog post about common misconceptions of basic EPI parameters. Test your knowledge of EPI myths. layerfmri.com/epimyths/ 1/3
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layerfmri.bsky.social @layerfmri.bsky.social · 02/10/2025
New layer-fMRI preprint capturing the spatial variability of layer-profiles for a simple visual stimulation. By Blazejewska et al doi.org/10.1101/2025...
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layerfmri.bsky.social @layerfmri.bsky.social · 02/10/2025
New layer-fMRI preprint using simultaneous layer-fMRI with EEG at 7T. Establishing an acquisition and analysis setup to capture layer-fMRI correlates of spontaneous alpha power variations. By Marsh et al. doi.org/10.1101/2025...
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layerfmri.bsky.social @layerfmri.bsky.social · 12/09/2025
There is going to be an exiting workshop on advanced fMRI end of October in Erice, Sicily (Italy). The agenda looks just at great as the location. ismrbf.marbilab.eu/events/7-xiv...
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layerfmri.bsky.social @layerfmri.bsky.social · 08/09/2025
New manuscript that uses layer-fMRI to investigate the brain mechanism of afterimages. By @sharifkronemer et al., doi.org/10.1101/2025...
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layerfmri.bsky.social @layerfmri.bsky.social · 08/09/2025
2/2 Häkkinen et al., investigated how to push layer-fMRI VASO at the next-Gen 7T (Feinbergatron) 7T scanner for layer-specific circuitry mapping. The fast gradients reveal temporal dynamics and connectivity with the cortex. doi.org/10.1101/2025...
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layerfmri.bsky.social @layerfmri.bsky.social · 08/09/2025
Two exciting new manuscripts on layer-fMRI VASO in the Hippocampus: 1/2 Ahmadi et al. focuses on the biophysical challenges and how to account for them. They show the feasibility of laminar specific VASO- disseminated across multiple clinical 7T scanners. doi.org/10.1101/2025...
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Reposted by @layerfmri.bsky.social
storrisi.bsky.social @storrisi.bsky.social · 04/09/2025
From a few years ago but it disappeared off yt so I recently re-uploaded. SurfLayers demo. #tbt youtu.be/Py0a8O2h-gc?...
youtu.be
OHBM 2021 SurfLayers abstract video
YouTube video by Sam Torrisi
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layerfmri.bsky.social @layerfmri.bsky.social · 02/09/2025
This thread reminds me on a satirical Blog post on this issue. layerfmri.com/the-best-seq... Maybe this one fits best here on the topic of bing noisy.
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layerfmri.bsky.social @layerfmri.bsky.social · 02/09/2025
Thanks. I am glad we agree that the replication discussion was not about VASO then. Kenshu Koiso (movies + newly faces/places), Insub Kim (orientation), Daniel Haenelt (ODC) compared MVPA across contrasts. Their results agree with you on vein effects in MVPA BOLD. No 🌌 left, DM 4 🔗.
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layerfmri.bsky.social @layerfmri.bsky.social · 02/09/2025
Fully agree. There was a slide on one of the layer-fMRI educationals at OHBM trying to get an overview of the layer field. Attention (or what people call it to be) seems to be the least reproducible effect in the field.
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layerfmri.bsky.social @layerfmri.bsky.social · 01/09/2025
It's not so easy. It depends, if reduced sensitivity is coming from removing fasle-positive vein signals. VASOs sensitivity to micro vessels is not bad and often used for MVPA Wasn't the replication issue in that study discussed wrt segmentation issues. If at all, VASO's T1 contrast helps with that
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Reposted by @layerfmri.bsky.social
practiCal fMRI @practicalfmri.bsky.social · 31/08/2025
Hence use VASO :-)
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Reposted by @layerfmri.bsky.social
Ravi Menon @northernthrux.bsky.social · 30/08/2025
For the laminauts. @layerfmri.bsky.social
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Karolis Degutis @karolisdegutis.bsky.social · 30/08/2025
Happy to see this out: our new preprint shows that laminar GE-BOLD fMRI decoding isn’t immune to vascular draining biases. Simulations reveal false positives due to multivariate signal spread across layers, but oversampling + deconvolution can (sometimes) improve specificity.
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layerfmri.bsky.social @layerfmri.bsky.social · 24/08/2025
New layer-fMRI preprint looking at laminar response differences of across (very) early development in newborns. Exciting new directions in the field. By Moore et al. doi.org/10.1101/2025...
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layerfmri.bsky.social @layerfmri.bsky.social · 22/08/2025
This is a really nifty tool. Great to have it working for the lastest MacOS versions. Thanks Pete
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layerfmri.bsky.social @layerfmri.bsky.social · 05/08/2025
New layer-fMRI paper investigating the microcircuitry of proprioception by comparing laminar fMRI profiles during active and passive finger movements. By Knudsen et al. doi.org/10.1093/cerc...
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Reposted by @layerfmri.bsky.social
Alessandra Pizzuti @alepizz.bsky.social · 04/08/2025
I’m proud to share that on July 3rd, I defended my PhD thesis: "Distinct and complementary: insights on bistable perception in humans using ultra-high field MRI across multiple spatial scales." The defense stream is here: youtube.com/live/J7wmn5s... Excited for what’s next!🧠🧲🥳
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layerfmri.bsky.social @layerfmri.bsky.social · 04/08/2025
New layer-fMRI post doc position for methods development of high-res fMRI in the human Hippocampus. In Tübingen with Klaus Scheffler, Jonas Bause and Svenja Brodt layerfmri.wordpress.com/wp-content/u...
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layerfmri.bsky.social @layerfmri.bsky.social · 04/08/2025
A series of talks on 7T (f)MRI from the SIEMENS UHF user meeting in Frankfurt are now online: www.magnetomworld.siemens-healthineers.com/clinical-cor...
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Reposted by @layerfmri.bsky.social
danielhaenelt.bsky.social @danielhaenelt.bsky.social · 01/08/2025
I’m happy to share that our manuscript on the cortical depth-dependency of the GE- and SE-BOLD point spread function at 7 Tesla is now available on bioRxiv! www.biorxiv.org/content/10.1...
biorxiv.org
Spatial specificity of the functional gradient echo and spin echo BOLD signal across cortical depth at 7 T
Functional magnetic resonance imaging (fMRI) at high magnetic field strengths (≥ 7 T) is a promising technique to study the functioning of the human brain at the spatial scale of cortical columns and ...
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layerfmri.bsky.social @layerfmri.bsky.social · 28/07/2025
The Minnesota ultra-high-field meeting will again offer the popular hands-on layer-fMRI analysis pre-workshop on practical aspects. October 13th-14th 2025. Registration: sites.google.com/umn.edu/2025...
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layerfmri.bsky.social @layerfmri.bsky.social · 22/07/2025
Next week there is going to be an exciting virtual workshop from the ISMRM brain function group: Studying Brain Function in Fetuses, Newborns and Infants. Next Wednesday. Zoom link in the QR code
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layerfmri.bsky.social @layerfmri.bsky.social · 18/07/2025
This is a nice new study showing the mechanisms why CBV fMRI is so specific to cortical layers: The somatostatin neurons are driving the hemodynamic response at fMRI-typical time scales. By Vo et al, from Seong-Gi Kim's lab. doi.org/10.1038/s414...
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layerfmri.bsky.social @layerfmri.bsky.social · 16/07/2025
New layer fMRI book chapter on the value of layer-fMRI for understanding psychiatric disorders. by J Haarsma and P Kok @jhaarsma.bsky.social @peterkok.bsky.social doi.org/10.1007/7854...
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Reposted by @layerfmri.bsky.social
Faruk Gulban @ofgulban.bsky.social · 15/07/2025
I've always wanted to explore fMRI time series as a smooth, real-time movie. Now I can with LayNii IDA. Plus, with voxel-wise correlations on the fly. Fast, intuitive, and surprisingly insightful. 40 ms TR fMRI data from @practicalfmri.bsky.social ! @layerfmri.bsky.social @afni-pt.bsky.social
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layerfmri.bsky.social @layerfmri.bsky.social · 14/07/2025
New layer-fMRI preprint by Clauner et al. Interleaved EEG and layer-fMRI is used to investigate feature-specific and unspecific correlates of alpha and gamma oscillations in superficial and deeper layers. doi.org/10.1101/2024...
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layerfmri.bsky.social @layerfmri.bsky.social · 02/07/2025
New high resolution fMRI paper describing the capabilities and challenges of 9.4T fMRI in the cerebellum. By van der Zwaag et al., (@highonfield.bsky.social, @nikospriovoulos.bsky.social) doi.org/10.1002/mrm....
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