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Kushal K. Dey

@kanishkadey.bsky.social
22 followers 25 following 1 posts

Assistant Professor, Memorial Sloan Kettering Cancer Center, Josie Robertson Investigator, Statistical Genetics, UChicago grad, Harvard postdoc

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Reposted by Kushal K. Dey
Andreas Gschwind @argschwind.bsky.social · 15/07/2026
Thrilled to share that our ENCODE enhancer–gene mapping paper is now out in Nature! An encyclopedia of human enhancer–gene regulatory interactions: www.nature.com/articles/s41... Thread 👇 1/
nature.com
An encyclopedia of human enhancer–gene regulatory interactions - Nature
An encyclopedia of more than 92 million enhancer–gene regulatory interactions created as part of the ENCODE4 project provides a valuable resource for future studies of gene regulation and human geneti...
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Reposted by Kushal K. Dey
Danwei Huangfu @danweihuangfu.bsky.social · 17/06/2026
New preprint with @kanishkadey.bsky.social's group. We asked: can you connect what happens to beta cells under nutrient stress in a dish to T2D genetics and dietary patterns in ~46K people? We built a "dish-to-biobank" framework to find out. #StemCells #UKBiobank www.biorxiv.org/content/10.6...
biorxiv.org
A dish-to-biobank framework links β-cell nutrient-stress programs to genetic and dietary risk for Type 2 Diabetes
Type 2 diabetes (T2D) arises from genetic susceptibility and chronic metabolic stress, but whether these converge on shared molecular programs in human populations remains unclear. Here, we develop a ...
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Kushal K. Dey @kanishkadey.bsky.social · 25/09/2025
Introducing Spacelink, a unified framework for identifying and prioritizing spatially variable gene programs at tissue and cell type resolution and linking them to disease GWAS studies. Led by Hanbyul Lee & Haochen Sun www.biorxiv.org/content/10.1...
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