iiinova — where your digital self keeps evolving

Reposted by Jose Perez-Silva

bioRxiv Bioinfo @biorxiv-bioinfo.bsky.social · 22/01/2026

nVenn2: faster, simpler generalized quasi-proportional Venn diagrams www.biorxiv.org/content/10.64898/20…

063

Jose Perez-Silva @jgperezsilva.bsky.social · 15/01/2026

Another amazing #PAG33 closing up. Lots of amazing talks and people.

110

Reposted by Jose Perez-Silva

Katharina Hoff @katharinahoff.bsky.social · 13/01/2026

Cynthia Webster explains how Easel and EnTaP work for structural and functional genome annotation. Btw, Easel was our inspiration for the HC pipeline in Tiberius. #PAG33

041

Reposted by Jose Perez-Silva

Ensembl @ensembl.org · 13/01/2026

How can animal genomics communities coordinate data resources? Garth Ilsley presents with highlights from the FAANG and Ensembl Regulation data portals #PAG33

051

Reposted by Jose Perez-Silva

Ensembl @ensembl.org · 11/01/2026

José Pérez-Silva @jgperezsilva.bsky.social presents on gene annotation methods used by Ensembl at #PAG33

0155

Reposted by Jose Perez-Silva

Ensembl @ensembl.org · 09/01/2026

If you're in sunny San Diego for #PAG33, join us at our workshop, “Integrated Genome Resources at EMBL-EBI”, to learn more about our exciting new features and data resources for genomics and pangenomics! It's on Sunday 11 January from 8:00– 12:00, we hope to see you there!

022

Reposted by Jose Perez-Silva

Genome Biology and Evolution @genomebiolevol.bsky.social · 20/03/2025

March: 🐷 Tracing the routes of Indian Pigs 🐷 India is a domestication center for pigs. Analysis of 239 mitochondrial genomes reveals: an independent domestication in North India & genetic ties of Indian island pigs to Vietnam doi.org/10.1093/gbe/... #Domestication #Pigs #India #OpenAccess

doi.org

Multiple Domestication Centers of the Indian Pig Population

Abstract. The domestication of animals is a major milestone in human history and has been studied in various fields. Pig domestication, in particular, has

041

Reposted by Jose Perez-Silva

EMBL-EBI @ebi.embl.org · 19/03/2025

We’re thrilled to announce that the EMBL-EBI Thornton Building has been officially opened by Lord Vallance of Balham, the UK’s Minister for Science, Research and Innovation. We hope it will be a space where collaboration, translation, and science can thrive! 🌱

2699

Jose Perez-Silva @jgperezsilva.bsky.social · 03/03/2025

I love coming to campus on days like this. Cold sunny weather is my soft spot.

030

Reposted by Jose Perez-Silva

Beth Flint @bethflint.bsky.social · 06/02/2025

The Wellcome Genome Campus was in the clouds this morning ☁️🏢☁️

Frosty wintery scene. An oak tree in a field. Everything else is obscured by mist

192

Jose Perez-Silva @jgperezsilva.bsky.social · 06/02/2025

Give this a try, and leave some feed back to help us make the service better!

021

Reposted by Jose Perez-Silva

Mallory Freeberg @malloryfreeberg.bsky.social · 05/02/2025

💡Have an idea for tackling challenges in #genomic data #interoperability? ⚙️Implementing Global Alliance for Genomics & Health (GA4GH) products? 🙌 #Collaborating across teams and organisations? Check out our Open Call for GIF Projects! 👉 www.ga4gh.org/open_call/pr... ⏰Applications due 7 Mar 2025

docs.google.com

Application for GIF Projects

GIF Projects are community-led initiatives designed to tackle challenges in genomic data interoperability by implementing one or more GA4GH products. These projects focus on practical solutions to enh...

011

Jose Perez-Silva @jgperezsilva.bsky.social · 31/01/2025

Even in a gloomy day, a walk round campus if filled with beautiful scenes and peaceful corners. Just what you need before diving back into annotation pipelines! #welcomeGenomeCampus #hinxton

010

Jose Perez-Silva @jgperezsilva.bsky.social · 29/01/2025

A new release packed with #livestock and companion animals! 🐮New #cattle reference (ARS-UCD2.0)! 🐑🐑 Two new #sheep breeds (Ujimqin, and new texel)! 🐱 And a new #cat! And that's not going into murine genomes, regulation and variation data or comparative analysis! It's almost here! 🚄

040

Jose Perez-Silva @jgperezsilva.bsky.social · 28/01/2025

After more than 3 years annotating genomes at Ensemble, I can say that I’m proud to be part of such an incredible team, with so many people working hard on advancing genomics (for a quarter of a century now!!!). 🧬🧑‍💻🥈

060

Reposted by Jose Perez-Silva

EMBL @embl.org · 27/01/2025

Recruitment for the EMBL International PhD Programme is officially open! 🔊 At EMBL, we train young scientists to become skilled and creative future leaders in academia, industry & other sectors. Start your career in the life sciences with us! www.embl.org/about/info/e... 🧪 #AcademicSky #careers

EMBL International PhD Programme Summer Recruitment Applications open. Applications close 10 March 2025.

02916

Jose Perez-Silva @jgperezsilva.bsky.social · 24/01/2025

New release of Ensembl beta is out!!! Many new annotations available, including new #cattle reference #genome, and 2 #t2t cattle genomes for Tuli and Wagyu breeds! 🐮🐮🐮 #genomeAnnotation #farmedAnimalsGenetics Go and check it out!!! beta.ensembl.org

beta.ensembl.org

Ensembl

The new website of the Ensembl project

051

Reposted by Jose Perez-Silva

Rob Finn @robdfinn.bsky.social · 23/01/2025

Celebrating 25 years of @ensembl.bsky.social - the first announcement from @ewanbirney.bsky.social, milestone 1 was ensembl.org - thanks to all have worked on the resource, and the scientists who use it. Many exciting developments to present pangenomes, capture biodiversity and scale for the future

Email announcing the first release of Ensembl

1328