iiinova — where your digital self keeps evolving

Reposted by Jen Fleming

Protein Data Bank in Europe (PDBe) @pdbeurope.bsky.social · 03/03/2025

🔍✨ The Encyclopedia of Domains (TED) domain-level annotations of AlphaFold-predicted structures helps you interpret function! 🏗️🔬 Also: 🔹 Domain organization 🔹 Structural context (PAE plots) 🔹 Evolutionary links (CATH) 🔗 Explore alphafold.ebi.ac.uk #AlphaFold #TED #AI #Bioinformatics

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Reposted by Jen Fleming

Protein Data Bank in Europe (PDBe) @pdbeurope.bsky.social · 04/03/2025

🧬 Exciting AlphaFold DB updates: ✅ Bulk downloads – Up to 100 structures (PDB, mmCIF / JSON) ✅ pLDDT filtering – Find high-confidence models ✅ Table exports 📖 Read www.sciencedirect.com/science/arti... 🔗 Explore alphafold.ebi.ac.uk #AlphaFold #AI #Bioinformatics #ProteinStructures

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Reposted by Jen Fleming

Protein Data Bank in Europe (PDBe) @pdbeurope.bsky.social · 07/03/2025

Zebrafish 🦓🐟 inspired artwork 🎨 by a Saffron Walden County High School student. Zebrafish also help scientists 🥼 to understand cell growth & metabolism, e.g. Thioesterase Superfamily Member 2 (THEM2). More ⬇️ www.ebi.ac.uk/pdbe/article... #SciArt #NatureArt #PDBart

This artwork is by Violet Gordon. Violet, aged 16, is a student at the Saffron Walden County High School, UK. It was made as part of the PDBArt. The art was inspired by a macromolecule structure PDB id 4ORD (PDBe.org/4ord/3d). PDB entry title: Crystal Structure of Zebra Fish Thioesterase Superfamily Member 2

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Reposted by Jen Fleming

Protein Data Bank in Europe (PDBe) @pdbeurope.bsky.social · 12/03/2025

🚀 Exciting Opportunity 🚀 Do you have a passion for structural biology? We're hiring at @PDBeurope! 🌟 Apply now to help annotate biological data 💻 🔬 🔗 embl.wd103.myworkdayjobs.com/en-US/EMBL/d... Closing date: April 6, 2025 #JobOpening #StructuralBiology #Bioinformatics #ScienceJobs #Hiring

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Reposted by Jen Fleming

Protein Data Bank in Europe (PDBe) @pdbeurope.bsky.social · 12/03/2025

PDBe Coordinator, Jen Fleming, speaking at UK Parliament 🏛️ on open data's importance for: 🚀 fueling AI-driven innovations 💪 empowering researchers ➕ the impact of the collaboration between EMBL-EBI & Google DeepMind's #AlphaFold DB #OpenData #Innovation #SciencePolicy #STEM #StructuralBiology

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Reposted by Jen Fleming

Gemma Wood @gemmawood.bsky.social · 11/03/2025

Great to see @pdbeurope.bsky.social Jen Fleming's presentation to the Commons SIT Committee on @ebi.embl.org 's data resources and AlphaFold committees.parliament.uk/event/23517/...

Jen holding up a protein structure model to show to the Committee

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Jen Fleming @jen-fleming.bsky.social · 24/11/2024

Writing a manuscript is much like refining a structure, it is not so much finished but abandoned! It’ll never be perfect you’ve got to call when it’s good enough for what you need it to do.

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Reposted by Jen Fleming

Protein Data Bank in Europe (PDBe) @pdbeurope.bsky.social · 22/11/2024

Did you know that the AlphaFold database (alphafold.ebi.ac.uk) is brought to you by a collaboration between PDBe (part of EMBL-EBI; @ebi.embl.org) and Google DeepMind? 1️⃣ yes, definitely 2️⃣ was unsure 3️⃣ no, had no idea 📊 Show results

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Jen Fleming @jen-fleming.bsky.social · 19/11/2024

Is it also possible to get the PDBe added? @pdbeurope.bsky.social they are the official account of the protein databank, cheers Erik!

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Jen Fleming @jen-fleming.bsky.social · 19/11/2024

Hi can you please add me my ORCID is orcid.org/0000-0003-40...

orcid.org

ORCID

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Reposted by Jen Fleming

Protein Data Bank in Europe (PDBe) @pdbeurope.bsky.social · 05/11/2024

🚨 Heads up! Our PDBeChem (www.ebi.ac.uk/pdbe-srv/pdbechem/) service will be retired later this month. 🚨 But don’t worry - explore our new PDBe-KB ligand pages! Explore new features using this example Imatinib page: ➡️ wwwdev.ebi.ac.uk/pdbe-srv/pdbechem/chemicalCompound/show/STI #PDBe-KB #ligands

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Reposted by Jen Fleming

Protein Data Bank in Europe (PDBe) @pdbeurope.bsky.social · 19/11/2024

Want more biological database resources & tools in your feed? Welcome EMBL-EBI (@ebi.embl.org) to 🦋💙 Bluesky 🦋💙! PDBe is part of EMBL-EBI & behind various resources: - founding partner of the wwPDB, - community-led PDBe-KB resource - AlphaFold Protein Structure Database (with Google DeepMind)

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