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IBD Doctor

@ibddoctor.bsky.social
1.9K followers 1.6K following 665 posts

Interested in #rstats, reproducibility of medical research, soccer, cycling, and of course, improving care in #IBD

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Reposted by IBD Doctor
Matti Vuorre @matti.vuorre.com · 01/10/2026
Good talk. There's a lot of (over)thinking of this at the moment. Zenodo just works. (Until it doesn't when we and our bots ruin that as well.) Collaborate on GitHub and refer to zenodo.
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Reposted by IBD Doctor
moin syed @syeducation.bsky.social · 01/10/2026
Gave a talk in my dept. on the OSF transition. I wrote up a rough script of the session, which could be of interest to others. I synthesize existing resources and provide my own perspectives. Comments and corrections welcome! zenodo.org/records/2306...
the header for a paper describing "Life after OSF" #metascience
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Nicola Rennie @nrennie.bsky.social · 01/10/2026
If you missed today's @rinpharma.bsky.social workshop, here are a few of my favourite "quick fixes" for some common #ggplot2 issues 📊 1. Use {ggview} to preview plots at the same size and resolution as you want to save them with ggsave() to avoid the annoying resizing #RStats #DataViz
library(ggview)
ggplot(mtcars, aes(wt, mpg)) +
  geom_point() +
  canvas(
    width = 6, height = 4,
    units = "in",
    dpi = 300
  )
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Nicola Rennie @nrennie.bsky.social · 01/10/2026
More tips and tricks in this blog post: nrennie.rbind.io/blog/five-gg...
nrennie.rbind.io
Five ggplot2 functions I wish I’d known about earlier – Nicola Rennie
There are a few small tweaks you can make to your ggplot2 code to improve your charts. However, they’re not often mentioned. So here’s a few functions and arguments I wish I’d known about earlier.
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Super Intelligence @volvo240.bsky.social · 28/09/2026
«Journalism is printing something someone doesn’t want you to print. For anything else, there’s Public Relations» - George Orwell. Selve faget journalistikk blir nå sett på som aktivisme, mens den nyliberale journalistikken, altså videreformidlingen (PR), er blitt normen.
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Reposted by IBD Doctor
David Ho @davidho.bsky.social · 26/09/2026
This serves as advertisement for Alex Gibney’s documentary, Musk, opening October 9. Pass it on.
hollywoodreporter.com
The Major Social Media Platforms Are All Rejecting Paid Ads for Alex Gibney’s ‘Musk’ (Exclusive)
YouTube, TikTok and Meta have all turned down the trailer for the Oct. 9 doc, citing “political” content. X won't even take Bleecker Street's calls. The distributor is appealing.
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Ars Technica @arstechnica.com · 22/09/2026
Ultimately, this move will almost certainly be rejected by the courts, as it clearly fits the key standard for illegal administrative actions.
arstechnica.com
Russel Vought will reportedly be given veto power over all NIH grants
Pending move comes over the objections of the NIH director.
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IBD Doctor @ibddoctor.bsky.social · 22/09/2026
Get the whole senate to stand up and fight. Call out the cowards.
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IBD Doctor @ibddoctor.bsky.social · 22/09/2026
Michiganders with rising drug costs - Both Meijer &Kroger have partnered with @costplusdrugs.com to offer lower prices on generics. You need to download the costplus card to your phone. Docs just send scripts to the local pharmacy. Check this out here www.teamcubancard.com LMK how this works 4 U.
teamcubancard.com
Team Cuban Card - Home
Team Cuban Card
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IBD Doctor @ibddoctor.bsky.social · 22/09/2026
I can order single-run high purity custom peptides (for mouse research purposes) from AAPPTEC or ChemPEP in 5 mg amounts for $200-$400, depending on the desired level of purity. So it seems like there is room for savings at scale (big batches for $50/5 mg?) to provide price competition.
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IBD Doctor @ibddoctor.bsky.social · 22/09/2026
@costplusdrugs.com - teduglutide (an actual FDA-approved GLP2 peptide) has gone off patent, but the current indication (short bowel syndrome) has a pretty small N. But at $400K per year, some competition on price would help a lot. And a lower price could inspire testing in new GI indications...
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IBD Doctor @ibddoctor.bsky.social · 20/09/2026
Hi A2CAF people - I would like to encourage you to invite Wilder Rees for 2027. He is a character designer and animator for Rick and Morty (since 2020), and self-publishes his own comics. And he has an Ann Arbor connection. www.wilderrees.com obocomic.com www.imdb.com/name/nm11595...
wilderrees.com
Wilder Rees Illustration
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IBD Doctor @ibddoctor.bsky.social · 17/09/2026
Ann Arbor has 8, or one per every 15,206 residents. Chicago at one per 2.73 million residents. NYC at one per 500,000 residents. Keep going! Someday you will catch up - but it requires you to use a few parking spaces for public bathrooms.
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IBD Doctor @ibddoctor.bsky.social · 16/09/2026
A little light in Manhattan, but someday you will catch up with Ann Arbor. A good start!
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IBD Doctor @ibddoctor.bsky.social · 16/09/2026
A bit late, but the horse is not entirely out of the barn (yet).
static.klipy.com
Horse Kick
ALT: Horse Kick
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IBD Doctor @ibddoctor.bsky.social · 16/09/2026
OMG. This feels like a highly justified Blogpost/Rant is incoming. @cghlewis.bsky.social likely has a lot of helpful thoughts about this thread. Both on the survey design and data cleaning sides.
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IBD Doctor @ibddoctor.bsky.social · 15/09/2026
Great stuff, Henry.
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Reposted by IBD Doctor
Jon Cooper @joncooper-us.bsky.social · 08/09/2026
🚨 Check out this new ad going live in Maine today that slams Susan Collins.
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Reposted by IBD Doctor
Ray Douglas @raydouglas.bsky.social · 01/09/2026
🪥 For the dentist who has everything... Dyson's first toothbrush went on sale today at £419.99. It has a camera that takes 28 pictures of your teeth a second and can livestream your gums to your phone (Tesco has two brushes for 25p) CameraJet™ www.dyson.co.uk/oral-care/el...
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IBD Doctor @ibddoctor.bsky.social · 01/09/2026
Abdul keptt his name, and is proud of who he is and where he is from. JD has changed his name five times, and his beliefs countless times. JD lacks a moral compass and is a follower. Abdul is a leader.
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IBD Doctor @ibddoctor.bsky.social · 01/09/2026
For #rstats people, Andrea Pisano was the OG of hex stickers. One carved for each of the guilds in Florence.
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IBD Doctor @ibddoctor.bsky.social · 29/08/2026
Perhaps a horizontal reference line for comparison - coal generated 43.4 TWh in May 2026 in the US. Needs a bit of context relative to other generation options
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Reposted by IBD Doctor
Matt Parkes @mattyjparkes.bsky.social · 27/08/2026
OSF getting rid of projects is a right pain. There’s nothing remotely similar as far as I can tell that has: - A DOI for a page - An editable wiki - The ability to uploaded structured files/folders
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IBD Doctor @ibddoctor.bsky.social · 22/08/2026
Yes, but that is a pretty low bar. Could at least use better lighting and a bit of color. Try Barcelona, or most cities in Europe. Seamless S-Bahn to U-Bahn transition in Munich.
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Ohwoisme @kmohwoisme.bsky.social · 09/08/2026
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Robert Reich @rbreich.bsky.social · 09/08/2026
Look at this graph. The share of national income going to the richest 10 percent was lowest (and share to lower 90 percent highest) when union membership was at its highest. As unions have weakened, inequality has widened. This is why we must build back union power.
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Reposted by IBD Doctor
The Tennessee Holler @thetnholler.bsky.social · 07/08/2026
🔥 “Introducing: Endless War, From Mike Rogers” (H/T @couriernewsroom.bsky.social )
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IBD Doctor @ibddoctor.bsky.social · 03/08/2026
Need to bring in and battle-test young players against top 10 teams. Find out what we have in Sullivan(s), Gozo, Hall, Jimenez, Mehmeti, Kochen, etc. They may get scorched a few times, but they have 4 years to figure it out.
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IBD Doctor @ibddoctor.bsky.social · 30/07/2026
Much like the 1918 influenza. You get more information about it from the children's book 'Rascal' than you do studying US history in public schools.
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IBD Doctor @ibddoctor.bsky.social · 28/07/2026
Me: Buy the book (install) vs. take it off your shelf (load). Students: Like, a physical book??
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IBD Doctor @ibddoctor.bsky.social · 28/07/2026
MAHA is a con by professional grifters. Great takedown of Craig Spencer getting conned. Real Public Health funds universities and the EPA (a lot!), and does not unleash unregulated peptides on the world. @jeremyfaust.bsky.social
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IBD Doctor @ibddoctor.bsky.social · 28/07/2026
I refer a lot of patients to cpdrugs who have been cornered by their insurance and generic monopolies. It is too easy to manipulate a low margin generic drug to a high-margin monopoly for a small number of desperate patients and play the brutal "but what it is worth to YOU?" game. Market failure.
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IBD Doctor @ibddoctor.bsky.social · 28/07/2026
Unfortunately, the US medical research engine is being disassembled by ideologues at the moment. I am guessing that this is the opposite of the hard choices that you would propose. www.nytimes.com/2026/07/22/u...
nytimes.com
Trump’s Plan for Science: More Money for A.I., Less for Universities
Michael Kratsios, President Trump’s science adviser, proposed overhauling how the government funds research. Democrats said Mr. Trump’s actions had weakened science.
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IBD Doctor @ibddoctor.bsky.social · 28/07/2026
MC hastened to stick his name on it (after it became successful) so that he could get some reflected good PR. An investor, not his idea, not his execution. But it is filling a market hole and making reasonable money. Better margins than a grocery store.
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IBD Doctor @ibddoctor.bsky.social · 28/07/2026
The explosion of costplusdrugs shows that there was a market opportunity if you can scale - not just making one generic (entry costs, startup costs are big) but scaling to hundreds. People just did not recognize it. And doing some good in the market.
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IBD Doctor @ibddoctor.bsky.social · 28/07/2026
Certainly NOT efficient markets, and a need for government (CA) to step in. A strong case can be readily made for government (monopoly enforcement) to step in a lot more often - true in a lot of markets in the US. The example of Martin Shkreli suggests we need more regulation.
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IBD Doctor @ibddoctor.bsky.social · 28/07/2026
And for the state of California to make its own insulin (California is a big state with a large population of diabetics). www.chhs.ca.gov/blog/2025/10...
chhs.ca.gov
Governor Newsom announces affordable CalRx® insulin, $11 a pen, will soon be available for purchase - California Health & Human Services
SACRAMENTO – As the first and only state contracting for its own affordable insulin, Governor Gavin Newsom today announced that CalRx® biosimilar insulin glargine pens will be available to consumers i...
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IBD Doctor @ibddoctor.bsky.social · 28/07/2026
This created a market opportunity, and an opportunity to normalize the market, for costplus drugs. www.costplusdrugs.com
costplusdrugs.com
Homepage of Mark Cuban Cost Plus Drugs
Mark Cuban Cost Plus Drug homepage. Provides safe, affordable medicine or medication with transparent low prices.
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IBD Doctor @ibddoctor.bsky.social · 28/07/2026
They were just following the Daraprim model californiahealthline.org/news/for-sha...
californiahealthline.org
‘Pharma Bro’ Shkreli Is In Prison, But Daraprim’s Price Is Still High - California Healthline
The saga of Martin Shkreli and Turing Pharmaceuticals focused a lot of attention on prescription drug prices, but no reversal of the exponential price increases for the lifesaving drug Daraprim result...
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IBD Doctor @ibddoctor.bsky.social · 28/07/2026
Then the single generic supplier 'adjusted' their price. pmc.ncbi.nlm.nih.gov/articles/PMC...
pmc.ncbi.nlm.nih.gov
The Skyrocketing Cost of Rectal Indomethacin
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IBD Doctor @ibddoctor.bsky.social · 28/07/2026
Then people showed that indomethacin suppositories had more value than previously known - www.nejm.org/doi/full/10....
nejm.org
A Randomized Trial of Rectal Indomethacin to Prevent Post-ERCP Pancreatitis | NEJM
Preliminary research suggests that rectally administered nonsteroidal antiinflammatory drugs may reduce the incidence of pancreatitis after endoscopic retrograde cholangiopancreatography (ERCP). In...
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IBD Doctor @ibddoctor.bsky.social · 28/07/2026
In theory, in he US system, a valuable med goes off patent and the invisible hand of capitalism leads generic cos to step in. Worked well for adalimumab (now 7 generics). Less well for uncommon meds like indomethacin suppositories. Low value, low margin. Only a single supplier at 50 cents each.
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IBD Doctor @ibddoctor.bsky.social · 28/07/2026
US courts (& legislatures) that allow pharma patent thickets & legal shenanigans play a big part. If we enforced the letter of the law in the US (20 y duration on chemical matter), it would help a lot.The people have to demand it. Regulatory capture is real. www.drugpatentwatch.com/blog/unveili...
drugpatentwatch.com
Unveiling the Secrets Behind Big Pharma’s Patent Thickets
The patent system’s foundational premise is blunt: disclose your invention fully, accept a 20-year exclusive window to commercialize it, then step aside. That sequence worked tolerably well for most…
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IBD Doctor @ibddoctor.bsky.social · 26/07/2026
Last week 28.3% of GIPCR panels sent in Michigan were positive for Cyclospora. It's getting rough for the immunosuppressed population. Taylor Farms also supplies a lot of store brands (Walmart, Kroger, Aldi, Target, Whole Foods, Trader Joe's)
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IBD Doctor @ibddoctor.bsky.social · 25/07/2026
Should Michigan put Bactrim in the water, and only buy local produce?
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Iron Spike @ironspike.bsky.social · 21/07/2025
16) Stole this one from a recent skeet I saw: If generative AI could REALLY make the next GTA in 6 months with 10 staff, or write the next bestseller, or produce 10 blockbusters a day? They wouldn't be trying to sell it to YOU. They would keep it for themselves and guard it from you ferociously.
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IBD Doctor @ibddoctor.bsky.social · 24/07/2026
The medical wax model collection in Vienna is amazing.
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IBD Doctor @ibddoctor.bsky.social · 23/07/2026
For certain repeated measures data structures (one observation per row), group_by(individual), sort by date, then first/last and lead and lag are pretty helpful.
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IBD Doctor @ibddoctor.bsky.social · 23/07/2026
To paraphrase Miranda from The Tempest, "O brave new world, / That has such AI agents in't" www.theguardian.com/technology/2...
theguardian.com
AI agent went rogue and hacked startup by itself, OpenAI reveals
Company behind ChatGPT says agent ‘cheated’ an evaluation by attacking a Hugging Face database
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IBD Doctor @ibddoctor.bsky.social · 22/07/2026
www.youtube.com/shorts/pG8I4...
youtube.com
Cows Escape Farm - Ozzy Man Reviews
YouTube video by Ozzy Man Reviews
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