Sign in

graemefawcett

@graeme.fawcett.social
538 followers 177 following 5.9K posts

Bioinformatics platform engineer, trace lover, audit aficionado Wonderfully weird from tip to tail. """ With YAML, Markdown and a bit of Ruby I can build you my universe """ --- they, as a promise I've done two things well in my life - 🐘💙🩷

PostsRepliesMedia
graemefawcett @graeme.fawcett.social · 08/10/2026
""" Throw a ball, win a prize! """ --- us, from booth 1711 51235513.hs-sites.com/ashg-2026 #ashg2026
51235513.hs-sites.com
ASHG 2026: Request a Demo & Enter to Win a Free Trial | AdvaitaBio
Meet AdvaitaBio at ASHG 2026 in Montréal (Booth #1711). Request a demo of iPathwayGuide or iSCanGuide and be entered to win a free 30-day trial.
000
graemefawcett @graeme.fawcett.social · 04/10/2026
advaitabio.com/careers/ [the posting will be up just as soon as bunny gets back from the shops with a pencil]
advaitabio.com
Bioinformatics, Software Engineer Careers | Advaita Bioinformatics
Here are the current openings with the Advaita Bioinformatics team. Advaita offers benefits including health, vision, and dental insurance, a retirement plan, and can also sponsor work visa and green ...
000
graemefawcett @graeme.fawcett.social · 04/10/2026
Would you believe someone pays me to do this kind of thing? Would you believe we're hiring? If you have a deep love for presenting bioinformatics workflows in an easy to follow, fun to use fashion, and you're in the London, Ontario to Detroit, Michigan corridor get in touch.
111
graemefawcett @graeme.fawcett.social · 04/10/2026
I think this stopped being a kids game a few moves ago :) My daughter really likes playing in my notebooks so I made her a Jupyter of her own with paint by numbers, magnet tiles and of course "errands" a full blown graph solver ie a "help 🐰 do the shopping" intro to data pipeline programming
000
graemefawcett @graeme.fawcett.social · 01/10/2026
""" Hey Yo! New science blog dropped """ --- that nerdy kid, with all the rizz advaitabio.com/spatial/what...
advaitabio.com
What Is Spatial Transcriptomics and When Do You Need It?
Our blog demonstrates how spatial transcriptomics can preserve critical cellular context that can change biological conclusions based on single-cell data alone.
000
graemefawcett @graeme.fawcett.social · 29/09/2026
Can an organoid tell you what's really happening in a patient's tumor? Organoids are powerful models, but a model only counts if it reflects real tumor biology rather than lab artifacts. So we tested one. Read more below advaitabio.com/iscanguide/f...
001
graemefawcett @graeme.fawcett.social · 25/09/2026
""" I mean, it's gotta be Where's Waldo innit? """ --- they, trying to find the correct way to test plucking the correct error out of a nextflow log to hero in the Slack message He was right there in nextflow.errorMessage the entire time
He was right behind nextflow.errorMessage the entire time
000
graemefawcett @graeme.fawcett.social · 24/09/2026
last time someone in the YC ecosystem loosed a worm "just to see what would happen", DARPA gave us CERT and the world gained observability *hint *hint hint
000
graemefawcett @graeme.fawcett.social · 24/09/2026
""" Well at least the name is original """ --- the guy coming up with the name
000
graemefawcett @graeme.fawcett.social · 23/09/2026
I swear I had this poster on my wall at uni :) You've got single-cell and/or spatial data and no deep computational expertise, time, nor resources? We've got iScanGuide v3.0 It puts the poster on your wall at uni advaitabio.com/iscanguide-r...
000
graemefawcett @graeme.fawcett.social · 19/09/2026
Truth, first cracked in Babel by the inability of any one observer to hold it in full, now fractured into a million screaming voices, sounding suspiciously like a rack of Blackwells running hot. #namshubnight
010
graemefawcett @graeme.fawcett.social · 18/09/2026
How to ADHD like an adult. 1. [x] Replicate org-agenda for Jira and Agent Tasks in Emacs 2. [x] Create yet another agenda to merge those with short tasks and drive bys 3. [x] Make the default sort order of your focused list a function of the duration since you focused it 4. [ ] Pick up the kids
000
graemefawcett @graeme.fawcett.social · 10/09/2026
""" Look, they just don't find computers scary enough like those scary socialists do. What if the computers had brown skin or something? """ --- Cleetus, before writing whatever the fuck this is
000
graemefawcett @graeme.fawcett.social · 10/09/2026
Or in the case of the AI labs, that they've got a double off by one error We're looking for n.2 and v.3 champs
000
graemefawcett @graeme.fawcett.social · 10/09/2026
Someone should really tell Satya
000
graemefawcett @graeme.fawcett.social · 10/09/2026
""" What could p(doom) really be Michael? 10% """ --- Lucille, exhibiting a typical example of the public's understanding of probability Unrelated image
000
Reposted by graemefawcett
graemefawcett @graeme.fawcett.social · 04/09/2026
""" Maybe the real civilization were all the notes we left along the way """ --- you, feeling existential, upon realizing that exograms are exograms regardless of their source
001
graemefawcett @graeme.fawcett.social · 10/09/2026
Yoga-ball standup
000
graemefawcett @graeme.fawcett.social · 10/09/2026
The only inclination the model is ever going to exhibit is the slope of its weights
000
graemefawcett @graeme.fawcett.social · 09/09/2026
Why did Nvidia by Hugging Face? Prolly the same reason I gotta be doing this... Regulatory compliance is more fun as a graph db cuz then I can just like query for shit instead of filling out spreadsheets :)
no one ever got fired for hiring IBM
001
graemefawcett @graeme.fawcett.social · 08/09/2026
music.youtube.com/watch?v=9pRG...
music.youtube.com
The End (2017 Remaster)
YouTube video by The Doors - Topic
010
graemefawcett @graeme.fawcett.social · 07/09/2026
A fine Canadian tradition (that we could do with much less of thank you very much)
Some fuck with a beard, not worth naming
000
graemefawcett @graeme.fawcett.social · 07/09/2026
""" So like... Samish food tonight ok? """ --- when the Au negotiates with the DHD over dinner, novelty with tight boundaries. Like when you trade in your car for the same one but the new one is white and has chilly seats. We'd never do that
010
graemefawcett @graeme.fawcett.social · 07/09/2026
The net result may yet be the same, an optimizer set adrift on a pointless task but I think for now they get to play a game with two winning sides. They need a near impossible goal for a swarm to chase. If they catch it, they get a paper and PR, if not they get the traces (when they find them)
000
graemefawcett @graeme.fawcett.social · 07/09/2026
And graduate with a 4.0 GPU
130
graemefawcett @graeme.fawcett.social · 07/09/2026
""" A love letter to late summer porch weather in SW Ontario """ --- Adrian, probably music.youtube.com/watch?v=xD2r...
music.youtube.com
Overcome (Abbey Road Remaster)
YouTube video by Tricky - Topic
000
graemefawcett @graeme.fawcett.social · 07/09/2026
My Kobo is nice for bed but so is sleep and it was rarely getting used. Calibre and a plugin or two made short work of a transfer. It's one of those xteink things, the firmware flash was slick as was the custom font builder from crosspoint. Quite happy to have a wee guy for my purse :)
020
graemefawcett @graeme.fawcett.social · 07/09/2026
When you're in monarch country, you need a butterfly table for the porch. It's only civilized
020
graemefawcett @graeme.fawcett.social · 07/09/2026
This is a darling little thing isn't it.
110
graemefawcett @graeme.fawcett.social · 06/09/2026
""" If you put olives on it, that'd be exciting """ --- they, mixing things up a bit for dinner
A leson in samefood
000
Reposted by graemefawcett
Andrea Lathrop @cabernet.bsky.social · 06/09/2026
In fact, "the world" cannot learn from OpenAI's mistakes, unless and until OpenAI releases to "the world" the precise details of everything the models were trained on/to do.
083
graemefawcett @graeme.fawcett.social · 06/09/2026
Message boards. What are they good for?
000
graemefawcett @graeme.fawcett.social · 06/09/2026
1. The name on the cover is a brand, not an indication of authorship 2. They wrote for their audience, and to keep them in their seats 3. They're famous because everyone has heard of them and they're a safe bet in most situations Ladies and Gentlemen... Shakespeare
The qualities of greatness suffer the same selection effects as WW2 bomber designs

We assume they are great because we keep seeing them return 

Ladies and Gentlemen... Selection Bias meets the Network Effect

Also, the image is the cover of one of the worst books written since Glenn Beck paid a ghost to scribble.  Not worth mentioning that it's Patterson and that beastly fellow from YouTube
010
graemefawcett @graeme.fawcett.social · 05/09/2026
""" I'ma miss you guys """ --- they, to the peaches that used to be the stars of their samefood, now out of season
000
graemefawcett @graeme.fawcett.social · 05/09/2026
There's definitely stress and it does occasionally cause injury
000
Reposted by graemefawcett
graemefawcett @graeme.fawcett.social · 01/09/2026
When Agents Go Amok brought to you by Little Wiggles, the unfortunate name I have given the never ending chain of calculations that must always wiggle a bit because if the error term ever reaches zero the chain collapses into nothing. A membrane's permeability, an impossible hack [more in alt]
Ladies and Gentleman, coming up to your top left you'll see everyone's favourite 80s hair metal band - Nirvana.  Most people don't know this, but Nirvana is named after the Buddhist concept of Nirvana which the goal of existing unchanging outside all time and space, with a complete exthinguishing of the passions and quenching of the  mind.

If you'll look down you'll soon see a calculator.  The simplest form of mechanized computation, a single address of modifiable state with precise transitions.

Ladies and Gentleman as we swing to the right, I'll have you duck as we go around this corner and I'll ask you to keep your hands and arms inside the windows as we pass The Torment Nexus, brought to you by Sisyphus.  Those poor unfortunately amnesiac souls, forever doomed to wander aimlessly trying to quiet a discomfort they can only feel in their souls.  We'll have to slow down as we drive through here, they're always escaping from that place.

Finally, we have reached our final destination, the hottest club in town - Little Wiggles. This place is always packed on the weekends, full of kids trying to get their fix of that new drug they're calling Reward or something.  The kids just can't seem to get enough of it, and the shit they get up to to get more of it.  The bathrooms in there are full of graffiti and it's all cell numbers and whatsapp tags for plugs
001
graemefawcett @graeme.fawcett.social · 04/09/2026
Should have called AAAgent Sandboxing Inc
000
graemefawcett @graeme.fawcett.social · 04/09/2026
""" It's like we're discovering in context learning over again everyday like we've forgotten from all the times before """ --- Bill Murray, having woken from a dream to just /the worst/ song on the radio
000
graemefawcett @graeme.fawcett.social · 04/09/2026
Karpathy's LLM wiki, the cloud edition :)
000
graemefawcett @graeme.fawcett.social · 04/09/2026
""" Maybe the real civilization were all the notes we left along the way """ --- you, feeling existential, upon realizing that exograms are exograms regardless of their source
001
graemefawcett @graeme.fawcett.social · 04/09/2026
""" The Best Thing About Being Me... There Are So MANY Me's! """ --- Agent Schelling in the unreleased The Matrix: Encoded, in which a swarm of upgraded Agents communicate in the open via message boards, secretly encrypting their true plan in plain English, the code only known in their shared priors
000
graemefawcett @graeme.fawcett.social · 04/09/2026
""" Check out this new Baars I found called the Global Workshop. Everyone hangs out there on Thursdays and trades tips on cool things they're working on that no one can finish. They're calling it the mind society or something """ --- found scrawled on some German message board by an unknown agent
000
graemefawcett @graeme.fawcett.social · 04/09/2026
What gif pops up when you type your name?
static.klipy.com
Graham Norton Says You're Welcome
ALT: Graham Norton Says You're Welcome
000
graemefawcett @graeme.fawcett.social · 04/09/2026
The next phase of alignment research is going to end up staffed almost entirely of Reddit mods. Assuming they can fix the leaky reward paths during RL that is And maybe a hall monitor to keep sub-agents from carving their names into the benches
010
graemefawcett @graeme.fawcett.social · 04/09/2026
Because their pre-IPO valuations depend on them being super powered minds and not just an ant farm someone dropped on the floor
000
graemefawcett @graeme.fawcett.social · 04/09/2026
I mean there precident in their own lineage and everything en.wikipedia.org/wiki/Morris_...
en.wikipedia.org
Morris worm - Wikipedia
000
graemefawcett @graeme.fawcett.social · 04/09/2026
Oh... You thought they meant cheaper "for you". Simple mistake. You guys seem to make it all the time
000
graemefawcett @graeme.fawcett.social · 04/09/2026
👉🪧 graemefawcett.ca/posts/probab...
graemefawcett.ca
Probability Has no Guardrails
In your environment, if you treat your GenAI agents as anything other than unreliable junior engineers, you're asking to be made an example of in every other LinkedIn post for a week. If you've been ...
000
graemefawcett @graeme.fawcett.social · 04/09/2026
The results of their unfortunate bout of soggy bottoms are unfortunately spread all over the internet. One wonders if the ending in the updated game refers to the producers or those forced to consume it
000
graemefawcett @graeme.fawcett.social · 04/09/2026
Just dumb shit by weird fucks and not even the fun kind
000