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Gerry Brien

@gerrybrien.bsky.social
166 followers 236 following 12 posts

Childhood Cancer | Chromatin Biology | Therapeutics | Outdoor Adventures www.brienlab.com

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Reposted by Gerry Brien
Hannah Long @hannahlong.bsky.social · 28/01/2026
📣 I'm excited to share our latest preprint! We adapt and characterise a neurosphere-based CNCC differentiation protocol, and demonstrate utility for quantitative phenotyping and craniofacial disease modelling! 🧫 Read about Array-CNCC here: www.biorxiv.org/content/10.6... @uoe-igc.bsky.social
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Gerry Brien @gerrybrien.bsky.social · 28/01/2026
We're also super excited to point you towards a wonderful, highly complimentary study from our colleagues Ana Banito and @nsbenab.bsky.social www.biorxiv.org/content/10.6...
biorxiv.org
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Gerry Brien @gerrybrien.bsky.social · 28/01/2026
Take home points: 📌 SS18-SSX drives transcription largely independent of SWI/SNF 📌 P300 is an essential co-factor for fusion protein binding and activity 📌 Dual p300 and SWI/SNF targeting offers a mechanistically grounded therapeutic strategy. Preprint - www.biorxiv.org/content/10.6...
biorxiv.org
SS18-SSX co-opts P300 to sustain oncogenic transcription independent of SWI/SNF activity
Synovial sarcoma is driven by the SS18-SSX fusion oncoprotein, which has been assumed to promote tumorigenesis through its incorporation into the SWI/SNF chromatin remodeling complexes. Accordingly, therapeutic efforts have focused on targeting SS18-SSX containing SWI/SNF assemblies, yet these approaches have produced limited clinical benefit. Here, we demonstrate that SS18-SSX sustains oncogenic transcription independent of SWI/SNF activity. Despite efficient degradation and dismantling of SWI/SNF complexes, fusion occupancy at target loci and associated gene expression programs remain largely intact. Instead, we identify the acetyltransferase P300 as an essential co-factor supporting SS18-SSX chromatin binding and transcriptional activation. Targeting P300 displaces the fusion from chromatin, suppresses its transcriptional output, compromising synovial sarcoma viability. Notably, dual PROTAC mediated degradation of P300 and SWI/SNF produces strong synergistic effects, broadly disrupting SS18-SSX localization and function. These findings redefine the mechanistic basis of synovial sarcoma and reveal a mechanistically anchored therapeutic strategy for targeting its core oncogenic driver. ### Competing Interest Statement C.R.V. has been a consultant for Flare Therapeutics, Roivant Sciences and C4 Therapeutics; has served on the advisory boards of KSQ Therapeutics, Syros Pharmaceuticals and Treeline Biosciences; has received research funding from Boehringer Ingelheim and Treeline Biosciences; and owns stock in Treeline Biosciences. S.A.A. has been a consultant and/or shareholder for Neomorph, Imago Biosciences, Hyku Therapeutics, C4 Therapeutics, Accent Therapeutics and Nimbus Therapeutics; and has received research support from Janssen and Syndax. N.O.C. is a co-founder, shareholder and management consultant for PhenoTherapeutics Ltd; and a shareholder in Amplia Therapeutics Ltd All other authors declare no financial interests UKRI, EP/X039633/1 Worldwide Cancer Research, https://ror.org/031tfbz57, 21-0271 Science Foundation Ireland, https://ror.org/0271asj38, 18/SIRG/5573
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Gerry Brien @gerrybrien.bsky.social · 28/01/2026
Combining degraders targeting p300 and SWI/SNF: 🧬 Strong synergy in SS18–SSX–positive cells 🧬 Profound loss of SS18–SSX chromatin binding 🧬 Broad collapse of oncogenic gene expression 🧬 Dramatic loss of cell viability
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Gerry Brien @gerrybrien.bsky.social · 28/01/2026
SWI/SNF and p300 impact different subsets of SS18-SSX binding sites This gave us an idea... 👉 What if we therapeutically target both?
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Gerry Brien @gerrybrien.bsky.social · 28/01/2026
To recap: Remove SWI/SNF ➡️ Modest effects on SS18-SSX binding Remove p300 ➡️ Major loss of SS18-SSX occupancy and transcription ❗ P300, not SWI/SNF, sustains the oncogenic program
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Gerry Brien @gerrybrien.bsky.social · 28/01/2026
We found that p300 is physically and functionally coupled to SS18-SSX 🧬 Co-localises with SS18-SSX on chromatin 🧬 Supports SS18-SSX binding at target sites 🧬 Required for SS18-SSX driven transcription ➡️ Remove p300 and SS18-SSX falls of chromatin
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Gerry Brien @gerrybrien.bsky.social · 28/01/2026
So, what is the engine? ️A focused CRISPR screen revealed a striking dependency on p300 🧬 Not its paralog CBP 🧬 Specific to SS18-SSX positive sarcoma lines
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Gerry Brien @gerrybrien.bsky.social · 28/01/2026
Even when SWI/SNF activity is broadly eliminated: 🧬 Oncogenic transcription does not shut down 🧬 SS18-SSX transcriptional activity persists ➡️ Conclusion: SWI/SNF is not the main engine of SS18-SSX driven transcription
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Gerry Brien @gerrybrien.bsky.social · 28/01/2026
We used degraders to dismantle SWI/SNF complexes entirely, including SS18-SSX containing assemblies. Result: 🧬 SWI/SNF complexes collapse 🧬 SS18-SSX stays bound at many target loci 🧬 Gene expression stays largely intact
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Gerry Brien @gerrybrien.bsky.social · 28/01/2026
Clinical efforts to target SWI/SNF (e.g. BRD9 degraders, based on our previous discoveries) have shown limited and transient benefits in synovial sarcoma patients. So, we asked a simple question: 👉 Does SS18-SSX actually need SWI/SNF to drive oncogenic transcription?
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Gerry Brien @gerrybrien.bsky.social · 28/01/2026
Synovial sarcoma is driven almost exclusively by a single oncofusion – SS18-SSX For years, the assumptions on disease mechanisms were simple: ➡️ SS18-SSX works by hijacking SWI/SNF chromatin remodeling activity Our new study shows that assumption was wrong 🧵👇 www.biorxiv.org/content/10.6...
biorxiv.org
SS18-SSX co-opts P300 to sustain oncogenic transcription independent of SWI/SNF activity
Synovial sarcoma is driven by the SS18-SSX fusion oncoprotein, which has been assumed to promote tumorigenesis through its incorporation into the SWI/SNF chromatin remodeling complexes. Accordingly, therapeutic efforts have focused on targeting SS18-SSX containing SWI/SNF assemblies, yet these approaches have produced limited clinical benefit. Here, we demonstrate that SS18-SSX sustains oncogenic transcription independent of SWI/SNF activity. Despite efficient degradation and dismantling of SWI/SNF complexes, fusion occupancy at target loci and associated gene expression programs remain largely intact. Instead, we identify the acetyltransferase P300 as an essential co-factor supporting SS18-SSX chromatin binding and transcriptional activation. Targeting P300 displaces the fusion from chromatin, suppresses its transcriptional output, compromising synovial sarcoma viability. Notably, dual PROTAC mediated degradation of P300 and SWI/SNF produces strong synergistic effects, broadly disrupting SS18-SSX localization and function. These findings redefine the mechanistic basis of synovial sarcoma and reveal a mechanistically anchored therapeutic strategy for targeting its core oncogenic driver. ### Competing Interest Statement C.R.V. has been a consultant for Flare Therapeutics, Roivant Sciences and C4 Therapeutics; has served on the advisory boards of KSQ Therapeutics, Syros Pharmaceuticals and Treeline Biosciences; has received research funding from Boehringer Ingelheim and Treeline Biosciences; and owns stock in Treeline Biosciences. S.A.A. has been a consultant and/or shareholder for Neomorph, Imago Biosciences, Hyku Therapeutics, C4 Therapeutics, Accent Therapeutics and Nimbus Therapeutics; and has received research support from Janssen and Syndax. N.O.C. is a co-founder, shareholder and management consultant for PhenoTherapeutics Ltd; and a shareholder in Amplia Therapeutics Ltd All other authors declare no financial interests UKRI, EP/X039633/1 Worldwide Cancer Research, https://ror.org/031tfbz57, 21-0271 Science Foundation Ireland, https://ror.org/0271asj38, 18/SIRG/5573
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Gerry Brien @gerrybrien.bsky.social · 21/05/2025
Just a few days after international DMG/DIPG day, our paper showing the importance of CBX4/PCGF4 containing cPRC1 complexes in glioma is out in @cp-molcell.bsky.social. Below is a nice synopsis of the paper by joint first author @EimearLagan.bsky.social
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Reposted by Gerry Brien
Eimear Lagan @eimearlagan.bsky.social · 21/05/2025
Excited to share our new paper out today in @cp-molcell.bsky.social! We show that the H3K27M oncohistone rewires cPRC1, creating a unique dependency on CBX4/PCGF4-containing complexes, and also reveal a previously unknown function of CBX4. Highlights below (1/11).
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Reposted by Gerry Brien
Molecular Cell @cp-molcell.bsky.social · 21/05/2025
Online Now: A specific form of cPRC1 containing CBX4 is co-opted to mediate oncogenic gene repression in diffuse midline glioma Online now:
dlvr.it
A specific form of cPRC1 containing CBX4 is co-opted to mediate oncogenic gene repression in diffuse midline glioma
Lagan, Gannon, et al. reveal that H3K27M-DMGs depend on a specific form of cPRC1 containing CBX4 and PCGF4. H3K27M alters H3K27me3 distribution, causing increased binding of CBX4-PCGF4-cPRC1 and oncogenic gene repression. CBX4’s ability to read H3K27me3 and to form a specific cPRC1 complex with PCGF4 makes it essential in DMG.
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