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Griffin Chure

@gchure.bsky.social
905 followers 581 following 14 posts

A computational scientist building tools for AI-enabled biological discovery @ Profluent Bio. gchure.bio

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Reposted by Griffin Chure
Emily Blythe @emilyblythe.bsky.social · 15/05/2026
Excited for the ASPET Annual Meeting next week! The Blythe Lab will be presenting three posters -- stop by to meet the team and see what we've been working on.
List of Blythe Lab posters at the ASPET Annual Meeting. Receptor Trafficking Defines TGF-β Signaling Outcomes presented by postdoc Dr. Zach Baker on Sunday 5/17 at Poster 071. Elucidating the Mechanism of β-arrestin-independent VIPR1 Internalization presented by postdoc Dr. Chantel Mastos on Monday 5/18 at Poster 281. Post-Endocytic Trafficking of VIPR1 and β2AR Differentially Regulate Downstream cAMP Signaling presented by researcher Eamon Cole, on
Monday 5/18 at Poster 282.
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Griffin Chure @gchure.bsky.social · 15/01/2026
Happy to share the published version of this work from my time at Stanford! Here, we leverage mathematical modeling and a large dataset of growth rates, cell sizes, and proteomics to probe how E. coli coregulate their geometry and their macromolecular composition. doi.org/10.1038/s414...
doi.org
Client Challenge
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Griffin Chure @gchure.bsky.social · 25/04/2025
Happy to have this out there! I had a lot of fun working with (and learning from) @akshitg.bsky.social on this mini-review on microdiversity in microbial populations and how current ecological theory fails to quantitatively explain the observations. doi.org/10.1111/1462...
doi.org
Paradox of the Sub‐Plankton: Plausible Mechanisms and Open Problems Underlying Strain‐Level Diversity in Microbial Communities
“Paradox of the sub-plankton: Plausible mechanisms and open problems underlying strain-level diversity in microbial communities” by Akshit Goyal* and Griffin Chure*. This work highlights the limitati...
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Reposted by Griffin Chure
Mason Kamb @masonkamb.bsky.social · 31/12/2024
Excited to finally share this work w/ @suryaganguli.bsky.social Tl;dr: we find the first closed-form analytical theory that replicates the outputs of the very simplest diffusion models, with median pixel wise r^2 values of 90%+. arxiv.org/abs/2412.20292
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Michael "Shapes Dude" Betancourt @betanalpha.bsky.social · 13/11/2024
Generate random draws from a Cauchy just to remind yourself that you almost never actually want a Cauchy anywhere in a probabilistic model.
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Griffin Chure @gchure.bsky.social · 16/02/2024
Happy to have this out today in JOSS! Hplc-py is a Python software tool that quantitatively decomposes complex chromatograms into their constituent signals: joss.theoj.org/papers/10.21...
joss.theoj.org
hplc-py: A Python Utility For Rapid Quantification of Complex Chemical Chromatograms
Chure et al., (2024). hplc-py: A Python Utility For Rapid Quantification of Complex Chemical Chromatograms. Journal of Open Source Software, 9(94), 6270, https://doi.org/10.21105/joss.06270
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Reposted by Griffin Chure
Sergey Kryazhimskiy @skryazhi.bsky.social · 17/10/2023
I am cautiously optimistic that my lab will have an open postdoc position in 2024. If you are potentially interested, please reach out. Or if you know somebody who might be interested, please connect us. My email is on our lab website sklab.science
sklab.science
SKLAB Home
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Griffin Chure @gchure.bsky.social · 10/10/2023
Over the past two years, I've used HPLC to measure carbon turnover in microbes. The most painful part was quantifying the resulting chromatograms. Today, I (with Jonas Cremer) released hplc-py: A python tool that makes quantification easy. cremerlab.github.io/hplc-py
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Michael "Shapes Dude" Betancourt @betanalpha.bsky.social · 30/08/2023
If you’re interested in comprehensive guidance for improving your communication skills I cannot recommend the book “Trees, Maps, and Theorems” enough, www.principiae.be/X0100.php. 2/5
principiae.be
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