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EDS Book | fosstodon.org/@eds_book

@eds-book.bsky.social
25 followers 85 following 24 posts

A computational notebook community supporting the publication of #open #collaborative #reproducible #transparent Environmental science 🌎 Posts by @alejo-coca.bsky.social

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EDS Book | fosstodon.org/@eds_book @eds-book.bsky.social · 08/12/2025
💡New ideas or suggestions for the notebook are welcome! Find how to contribute in our publication guidelines: 🔗 github.com/eds-book/eds...
github.com
eds-book/book/contribute.md at main · eds-book/eds-book
A computational notebook community for open environmental data science 🌎 - eds-book/eds-book
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EDS Book | fosstodon.org/@eds_book @eds-book.bsky.social · 08/12/2025
The executable notebook is citable and the latest version is archived in Zenodo: 🔗 doi.org/10.5281/zeno...
doi.org
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EDS Book | fosstodon.org/@eds_book @eds-book.bsky.social · 08/12/2025
Appreciations 🙏 Authors, Abner Bogan (CUAHSI) & Lindsay Platt (CUAHSI). 🙌 Reviewers, Heather Kropp (Hamilton College), @nquarderer.bsky.social (Earth Lab, University of Colorado – Boulder) & Kimberlee Wong (CUAHSI) ✨Editor, @alejo-coca (The Alan Turing Institute)
nquarderer.bsky.social
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EDS Book | fosstodon.org/@eds_book @eds-book.bsky.social · 08/12/2025
👏The authors show how targets, an open-source R package, could be a powerful tool to build a reproducible data pipeline for a complex environmental analysis. 💡Learn about targets: docs.ropensci.org/targets
docs.ropensci.org
Dynamic Function-Oriented Make-Like Declarative Pipelines
Pipeline tools coordinate the pieces of computationally demanding analysis projects. The targets package is a Make-like pipeline tool for statistics and data science in R. The package skips costly…
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EDS Book | fosstodon.org/@eds_book @eds-book.bsky.social · 08/12/2025
Highlights: ✅ Fetch and integrate diverse data ✅ Use targets for a structured and reproducible workflow ✅ Focus analysis on the timing and magnitude of flooding during Hurricane Harvey ✅ Only re-run parts of the pipeline affected by data or code changes
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EDS Book | fosstodon.org/@eds_book @eds-book.bsky.social · 08/12/2025
🎉 Celebrating a fresh and pioneer notebook in EDS book using the targets R package for reproducible data workflows 🌊 Authors from @cuahsi.bsky.social utilize the package to explore diverse environmental datasets, examining Hurricane Harvey's floods 🚀Launch edsbook.org/2dd74dfa-d87... 🧵(1/n)
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EDS Book | fosstodon.org/@eds_book @eds-book.bsky.social · 22/09/2025
💡New ideas or suggestions for the notebook are welcome! Find how to contribute in our publication guidelines: 🔗 github.com/eds-book/eds...
github.com
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EDS Book | fosstodon.org/@eds_book @eds-book.bsky.social · 22/09/2025
The executable notebook is citable and the latest version is archived in Zenodo: 🔗 doi.org/10.5281/zeno... Notebook metadata and link to the original paper: 🔗 w3id.org/ro-id/d14c54...
doi.org
Vehicle-based observation data processing and simple simulation experiments (Jupyter Notebook) published in the Environmental Data Science book
Notebook developed to demonstrate how to process and simulate observational data of greenhouses emissions from in-vehicle instruments.
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EDS Book | fosstodon.org/@eds_book @eds-book.bsky.social · 22/09/2025
Appreciations 🙏 Author of the notebook, @lucky-j-yang.bsky.social for his effort to share a great notebook. 🙌 Zehao Liu (Hangzhou Dianzi University) & Rizzieri Pedruzzi (Rio de Janeiro State University) for their revision to improve the notebook content. ✨@alejo-coca for editing the submission
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EDS Book | fosstodon.org/@eds_book @eds-book.bsky.social · 22/09/2025
👏The author explores field observations (with changed latitutde/longitude information) and run simulations experiments to verify whether the signal comes from a possible source, or to separate the regional baseline from the signal.
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EDS Book | fosstodon.org/@eds_book @eds-book.bsky.social · 22/09/2025
Highlights: ✅ Explore vehicle-based observation data ✅ Analyse the synchronisation of measurement signals ✅ Simulate the source of measurement signals ✅ Use simulation experiments to break down measurement signals and obtain regional baseline values
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EDS Book | fosstodon.org/@eds_book @eds-book.bsky.social · 22/09/2025
🎉 Let’s celebrate a fresh notebook contribution for the EDS book Gallery! 🐮 Lucky J. Yang from Westlake University shares a general workflow for processing vehicle-based methane observation data and performing preliminary source identification. 🚀Launch edsbook.org/dea59792-5a6... 🧵(1/n)
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EDS Book | fosstodon.org/@eds_book @eds-book.bsky.social · 07/07/2025
💡Are you interested in reading further or providing feedback on any of the new version?: github.com/eds-book/eds...
github.com
EDS book upgrades from Jupyter Book V1 to V2. Welcome v2025.7.0! · eds-book eds-book · Discussion #303
What's Changed docs: add rsignell as a contributor for bug by @allcontributors in #271 Migration of the core repository by @acocac in #278 fix url home by @acocac in #279 Fix zenodo urls in cite se...
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EDS Book | fosstodon.org/@eds_book @eds-book.bsky.social · 07/07/2025
🙏 We thank all notebook authors who have approved changes of their original contributions. Special thanks to the Executable Books team who have been working closely with multiple open-source communities towards a stable release of JB2.
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EDS Book | fosstodon.org/@eds_book @eds-book.bsky.social · 07/07/2025
The upgrade has major improvements for a better user experience, including: 🔹Dedicated landing page highlighting core aspects of our community 🔹Improved navigation to the main sections for ease of development & contribution 🔹More powerful metadata and in-browser execution across published notebooks
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EDS Book | fosstodon.org/@eds_book @eds-book.bsky.social · 07/07/2025
🚀 Launching a refreshed EDS book online resource and notebooks powered by the fresh beta release of Jupyter Book 2.0 (JB2) 🚀 👉 Check it out here: www.edsbook.org 📬 Stay tuned for further community-led notebooks ideas to be published this year!
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Climate Informatics @climformatics.bsky.social · 16/04/2025
🌎 Registrations open for Climate Informatics 2025 ( #CI2025 ), April 28–30, 2025, at @fgvoficial.bsky.social, in Rio,Brazil. Join us (hybrid) for #oceanography, #hydrology, #remotesensing, #climate & #socialimpacts sessions! 🔗 2025.climateinformatics.com.br #ClimateScience #DataScience
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Reposted by EDS Book | fosstodon.org/@eds_book
NOAA @noaa.gov · 22/04/2025
Today is the big day! Happy #EarthDay from NOAA! Check out noaa.gov/Earthday, & visit noaa.gov any time for the latest Earth science news, scientific research discoveries & ways you can get involved to help our home planet.
A doodled graphic of the Earth with the text “Every day is Earth Day” on it. The Earth is surrounded by drawings of nature including a desert, tropics, tundra, marine and deep sea environments, mountains, forests, rivers, and hills. Credit: Kaleigh Ballantine/NOAA.A NOAA small boat returns to ship under a rainbow after collecting water samples and deploying scientific instruments in the Pacific’s Kure Atoll. Credit: James Morioka/NOAA.
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Reposted by EDS Book | fosstodon.org/@eds_book
Climate Informatics @climformatics.bsky.social · 28/01/2025
[🚨🚨🚨 2 days:] 🔗🚀 Submit to #CI2025 and broaden your network in the #climate informatics world. #Opportunity #DataScience 2025.climateinformatics.com.br
2025.climateinformatics.com.br
Climate Informatics 2025
Hosted by IBM Research Brazil at _Centro Cultural Fundação Getúlio Vargas (FGV)_ from **April 28 to 30, 2025**.
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EDS Book | fosstodon.org/@eds_book @eds-book.bsky.social · 17/01/2025
🙏 Thank you to authors @alejo-coca.bsky.social , @annefouilloux.bsky.social, @rblourenco.bsky.social , @ampersandmcd.bsky.social, @douglas-rao.bsky.social & @scotthosking.bsky.social and @ukri.org funding.
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EDS Book | fosstodon.org/@eds_book @eds-book.bsky.social · 17/01/2025
💫 Kicking-off 2025 with excitement! EDS book is proud to share a fresh perspective article on the role of our community and platform in supporting @climformatics.bsky.social #climatescience hackathon on #reproducible research. doi.org/10.1017/eds.... 📬 Stay tuned for more coming activities!
doi.org
Improving the reproducibility in geoscientific papers: lessons learned from a Hackathon in climate science | Environmental Data Science | Cambridge Core
Improving the reproducibility in geoscientific papers: lessons learned from a Hackathon in climate science - Volume 4
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Alejandro Coca-Castro @alejo-coca.bsky.social · 18/12/2024
What does Artifact Evaluation mean for the computational #climatescience community? The blog post below summarises a pioneering initiative that some of us in @climformatics.bsky.social embarked on to embed more #reproducibility and #fairsoftware in climate research. Please share 🙏
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EDS Book | fosstodon.org/@eds_book @eds-book.bsky.social · 09/12/2024
💡New ideas or suggestions for the notebook are welcome! Find how to contribute in our publication guidelines: 🔗 github.com/alan-turing-...
github.com
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EDS Book | fosstodon.org/@eds_book @eds-book.bsky.social · 09/12/2024
The executable notebook is citable and the latest version is archived in Zenodo: 🔗 doi.org/10.5281/zeno... Notebook metadata and link to the original paper: 🔗 w3id.org/ro-id/7ad44b...
doi.org
Livestock detection using DeepForest (Jupyter Notebook) published in the Environmental Data Science book
What's Changed Postprint by @acocac in https://github.com/eds-book-gallery/95199651-9e81-4cae-a3a7-66398a9a5f62/pull/9 Full Changelog: https://github.com/eds-book-gallery/95199651-9e81-4cae-a3a7-66398...
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EDS Book | fosstodon.org/@eds_book @eds-book.bsky.social · 09/12/2024
#appreciations 🙏 Cam Appel for authoring the notebook idea and implementation. 🙌 @ethan.weecology.org & Louisa Van Zeeland (The Alan Turing Institute) for their revision and collaboration to improve the notebook content. ✨ @alejo-coca.bsky.social for editing the submission.
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EDS Book | fosstodon.org/@eds_book @eds-book.bsky.social · 09/12/2024
👏The author shows how DeepForest @weecology.bsky.social, an open-source Python library providing tools for object detection to the biological monitoring community, could be powerful to learn and improve detection of livestock in aerial imagery. 💡Learn about DeepForest: deepforest.readthedocs.io
deepforest.readthedocs.io
DeepForest documentation — DeepForest 1.4.1 documentation
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EDS Book | fosstodon.org/@eds_book @eds-book.bsky.social · 09/12/2024
Highlights: ✅ Detect livestock in airborne imagery using the pre-built livestock detection model ✅ Fine-tune the model using an open dataset ✅ Evaluate the model’s performance before and after fine-tuning ✅ Save and share model checkpoints via @hf.co allowing for reproducibility and collaboration
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EDS Book | fosstodon.org/@eds_book @eds-book.bsky.social · 09/12/2024
🎉 Let’s celebrate a fresh notebook contribution for the EDS book Gallery! 🐮 Cam Appel from Queen Mary University navigates the effectiveness of fine-tuning and #opendata for boosting a pre-trained model to accurately detect livestock in aerial imagery. 🚀Launch edsbook.org/notebooks/ga... 🧵(1/n)
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Huw Griffiths @huwiceandstuff.bsky.social · 27/11/2024
A #map of the world in the #Spilhaus projection with the global #ocean as the main focus. It includes arrows of the global currents (@oceanandice.bsky.social) and sea surface temperature & velocity (Niklas Röber). It shows the interconnectedness of the world's oceans with #Antarctica at the centre!
A map of the world in the Spilhaus projection with the global ocean as the main focus. It includes arrows of the global currents overlaid onto sea surface temperature & velocity. Spilhaus is a projection that emphasizes the interconnectedness of the world's oceans. The map features a centered and enlarged southern ocean that is surrounded by land masses, creating a continuous east-west expanse of ocean around the world.
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