Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 30/06/2026During the course, we worked with 4 microscopy systems: ZEISS Microscopy Axio Zoom, Axio Imager, and LSM 880, and the Evident Microscopy IXplore SpinSR SoRa. And 3 image processing and analysis software tools: ZEN, Imaris, and ImageJ/Fiji 010
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 30/06/202612 participants 4 microscopes 3 softwares 5 lecturers One microscopy adventure completed! 🔬 Thanks to: Participants, #CELLIMteam, @eurobioimaging.bsky.social, #Czech-BioImaging, @ceitec.eu & @masarykuniversity.bsky.social We are looking forward to seeing you at the 2027 course! 153
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 23/02/2026✨ CELLIM Best Microscopy Image Competition 2025 🌟 Honorary award 🌟 💙🔬Awarded to Denisa Belisová from @masarykuniversity.bsky.social 6th edition, and our CELLIM community keeps creating stunning microscopy every day. Some images come so close to the finals, again and again. #Microscopy #BioImage 182
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 20/02/2026Final results – 1st place winner: 🥇Sona Cesnarikova from Dasa Bohaciakova lab at @masarykuniversity.bsky.social 🔬#Lightsheet7 🖼️A single z slice selected from a full volume acquired in two channels 🥳Congratulations and thank you for sharing your science with #microscopy community 030
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 20/02/2026Final results – 2nd place winner: 🥇Nadiia Puskarova from @hejatko.bsky.social lab at @ceitec.eu 🔬#Lightsheet7 🖼️Orthogonal projection over z dimension acquired in two channels 🥳Congratulations and thank you for sharing your science with #microscopy community 051
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 20/02/2026🥳Final results - 2nd place winner: 🥈Nadiia Puskarova from @hejatko.bsky.social lab at @ceitec.eu @masarykuniversity.bsky.social 🔬#Lightsheet7 📷Orthogonal projection over z dimension acquired in two channels 🥳Congratulations and thank you for sharing your science with #microscopy community 020
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 19/02/2026Final results - 3rd place winner: 🥉Lucia Tomovicova from @hejatko.bsky.social lab 🔬Zeiss #LSM800 🖼️Color-coded orthogonal projection over z dimension 🥳Congratulations and thank you for sharing your science with #microscopy community! 071
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 09/02/2026✨ CELLIM Best Microscopy Image Competition 2025 — FINAL VOTING OPEN! 🏆🔬 6 finalists. Need your help to pick the Best of the Best. 🎥 Watch the video, see images + vote for up to 3: cellim.ceitec.cz/contest-2025... Please share & enjoy microscopy art! 💙 @eurobioimaging.bsky.social @ceitec.eu 032
Reposted by Cellular Imaging Core Facility - CEITECInstitute of Molecular Genetics @imgprague.bsky.social · 04/02/2026🚀Open PhD position! Join Nenad at IMG and share with us: 💛Experience 🧡Friendship 💙Professionalism 💜PhD community APPLY NOW: img.cas.cz/phd 011
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 29/01/2026📸 Best Microscopy Image Competition 2025 | #Matcha -Powdered Green Tea Final dissection of the green with @zeiss-microscopy.bsky.social #AXIOZoom More tea info: mezisalky.cz/product/0000... #BrnoRegion #CzBi @eurobioimaging.bsky.social #microscopy #art #tea Coming up soon: #vote for your favorite 020
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 27/01/2026📸 Best Microscopy Image Competition 2025 | Black Tea – Twirled and Pollen-Covered from China This week we start dark, with our ultimate favorite from Mezi Salky✨ #microscopy #bioimage #art #tea #AXIOZoom 030
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 22/01/2026📸 Best Microscopy Image Competition 2025 | Green Tea – Japanese Sencha Today we dive into deep green under the @zeiss-microscopy.bsky.social AXIO Zoom Sencha is steamed to lock in its fresh, grassy flavor and green color. More info: mezisalky.cz/product/0000... #microscopy #art #tea #AXIOZoom 052
Reposted by Cellular Imaging Core Facility - CEITECTomas Janovic @janovictom.bsky.social · 20/01/2026First test of live-cell single-molecule imaging in a new lab and it looks very promising!!! Thanks to @ceitec-cellimcf.bsky.social instruments at @ceitec.eu and @masarykuniversity.bsky.social. 🙌 #microscopy #singlemolecule #livecell #newlab 152
Reposted by Cellular Imaging Core Facility - CEITECFocalPlane @focalplane.bsky.social · 20/01/2026🔬🔦Our Imaging spotlight from @hiralshah.bsky.social & team highlights their U-ExM atlas of planktonic eukaryotes, including details on how you can explore this wonderful resource. Plus, check out Hiral’s top tips on getting started with expansion microscopy. focalplane.biologists.com/2026/01/20/i...focalplane.biologists.comImaging spotlight: U-ExM atlas of microbial eukaryotes - FocalPlaneImaging spotlight: U-ExM atlas of microbial eukaryotes - News 02211
Reposted by Cellular Imaging Core Facility - CEITECLucien Hinderling @lhinderling.bsky.social · 20/01/2026Real-time control of cell migration with closed-loop feedback, interoperability of smart microscopes, image analysis with Convpaint & our chatGPT microscope! Excited for this meeting! 2154
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 19/01/2026📸 Best Microscopy Image Competition 2025 | White Tea (wild bushes from Georgia) We put Mezi Šálky white tea under the @zeiss-microscopy.bsky.social AXIO Zoom 🔬 you can spot the fuzzy hairs on the leaves before & after brewing. More at: mezisalky.cz/product/0000... #microscopyart #tea #AXIOZoom 010
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 06/01/2026🖼️Dig out your favorite 2025 image! 🥇Win HERO13 GoPro from @zeiss-microscopy.bsky.social 🥈🥉Enjoy „tea meeting“ and store credit from Mezi Šalky 🧪 More info cellim.ceitec.cz/contest-2025... Didn’t work with CELLIM? Help us vote @masarykuniversity.bsky.social @ceitec.eu @eurobioimaging.bsky.social 011
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 10/12/2025🏅 Enabled by support by Specion, s.r.o., OptiXs s.r.o., @octagondata.bsky.social , #CzechBioimaging and @chanzuckerberg.bsky.social . Thank you all, and we hope to see you at next year’s #PABI, where we can discover new software features together. 000
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 10/12/2025🕐 36+ hours on FIJI, CellProfiler, Imaris, AIVIA, and OMERO. 🌐 An immeasurable amount of good mood & food, gained knowledge, and new connections! We experienced @leicamicrosystems.bsky.social #AIVIA and @dundeeuniunite.bsky.social #OMERO 100
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 10/12/2025🎤 11 expert speakers, who guided us through open-source and commercial software. 🧍 20+ participants, from across Czechia together with Germany, Italy, Scotland, Slovakia and Uganda. We worked on @oxfordinstruments.bsky.social #Imaris virtual machines with Julia and Guergana. 110
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 10/12/2025#PABI 2025 was successfully completed! Processing and Analysis of Biological Images workshop, organized and executed by #CELLIMteam, @ceitec.eu and CBIA. We learned about detectors, image pre-processing, FAIR data, #CellProfiler and #FIJI #workshop #bioimageanalysis #lightmicroscopy #bioimaging 261
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 24/11/2025📣A new paper from users of our core facility. Visit attached post and learn how Stereo and Confocal microscopy can work together to help understand plant embryogenesis. #PlantScience #Microscopy #UserCase #PaperRadar #CEITECscience #MUNI 030
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 11/11/2025📢Don't miss out! Your last chance to join CELLIM #workshop 🦄 Bring your data 👥 Learn from field experts 🌐 Data management and sharing #FAIR #EOSC #OneData 💻 #FIJI #Imaris #Aivia #OMERO #AItools More info: ceitec.eu/processing-a... #course #microscopy #image #analysis #software 040
Reposted by Cellular Imaging Core Facility - CEITECeurobioimaging.bsky.social @eurobioimaging.bsky.social · 28/10/2025Last month, we attended the "Imaging Principles of Life" / Czech-BioImaging Annual Meeting in Brno 🇨🇿 and got to visit the Multimodal #Imaging Brno Node. An amazing conference & fantastic facility visits! 🤩 @ceitec-cellimcf.bsky.social @ceitec.eu Learn more⤵️ www.eurobioimaging.eu/news/czech-b... 063
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 31/10/2025#CELLIMteam members were at @eurobioimaging.bsky.social #EVOLVE #TrainTheTrainer course on advancing core facility training design and delivery. Thanks to organizers, trainers and trainees for great atmosphere and knowledge transfer. #microscopy #training #course #community 021
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 15/10/2025Join us for our Processing and Analysis of Biological Images #workshop: four days focused on commercial and open-source #image-analysis software and data management. 🧑🎓 Lectures from invited industry specialists 👐 Guided #hands-on session 🦄 Bring your own #data #CzechBioImaging #EuroBioImaging 020
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 15/10/2025We stress-tested acquisition speed on our favorite flagellated #protozoa. Lightfield 4D captured full volumes of these fast swimmers with ease. When immobilized, the structural detail was impressive. #imaging #workshop #CEITECscience #MUNI #BRNOregionmicroscopy #CzechBioImaging 111
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 15/10/2025We hosted the new @zeiss-microscopy.bsky.social #Lightfield4D with Dr. Pavel Krist. 🧐First impressions: fast, user-friendly, single-snap z-information and outstanding temporal (t) resolution. ♥️Favorite feature: integration with #Airyscan for high-resolution detail capture. 121
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 03/10/2025Yesterday, #CELLIMteam had the pleasure of hosting two long term friends Pavel Krist during the @zeiss-microscopy.bsky.social #Lightfield4D workshop, and @olafselchow.bsky.social, for an exchange on the latest developments with the #Lightsheet7. #microscopy #collaboration #CEITECscience 040
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 03/10/2025😍 Amazing image, what system was it acquired on? 110
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 22/09/2025We also enjoyed a short talk from Pavel Krist #ZEISS on their new #Lightfield4D system. Exciting news: we’ll host a #workshop on this system at CELLIM in October! Stay tuned for details 👀 #Bioimaging #Microscopy #LightMicroscopy #CzechBioImaging #EuroBioImaging 000
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 22/09/2025Day 3: #ImagingPrinciplesOfLife electron microscopy We heard talks from Jana Rudá Kučerová on how different substances affect brain function, and Jarmila Navrátilová on her collaboration with the Centre for Biomedical Image Analysis. 📸 Plus, we grabbed a group photo of the #CELLIMteam. 130
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 22/09/2025We explored posters from across Czech Republic, and saw the #Tomocube in action with expert guidance from Daniel Ghete & Lenka Šídová #SVENBioLabs. 👏 Big thanks to Baubak Bajoghli #AustrianBioImaging for his inspiring talk on the power of collaboration. 🤝 010
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 22/09/2025Tereza Přerovská #MUNI_SCI wowed us with stunning #confocal images of Arabidopsis thaliana, showcasing how imaging drives plant research. 🌱 We explored posters from across Czech Republic, and saw the #Tomocube in action with expert guidance from Daniel Ghete & Lenka Šídová #SVENBioLabs. 👏 110
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 22/09/2025Day 2: #ImagingPrinciplesOfLife We kicked off with a fantastic talk by Klára Cigošová #MUNI_MED on the BEE-ST method, developed by Marcos G López in Jan Krivanek’s group showing its power with #MicroCT and #Lightsheet imaging. 🔬 📸 Mouse molar by Marcos González López 🔗 DOI: 10.1126/sciadv.adi0482 121
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 17/09/2025We are also happy to showcase the image of mouse embryo motor nerves acquired by Josef Lavicky on our Lightsheet7 microscope. We heard about amazing research behind it from Alena today. 030
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 17/09/2025It started #Czechbioimaging conference: Imaging Principles of Life Day 1: Intro to @eurobioimaging.bsky.social #czechbioimaging infrastructures Updates from core facilities 2 invited speakers: Christian Schöfer and Alena Salašová 172
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 17/09/2025We also: 💾 Processed more than 1 TB of #imaging data 🧪 Spent two full days in #hands-on microscopy sessions 🏆 Gave out prizes – and had great fun doing it! A huge thank you to all participants and our amazing staff for making this year’s course such a success. 020
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 17/09/2025We’ve just wrapped up this year’s Advanced Light Microscopy Methods in Biology workshop at @ceitec.eu @masarykuniversity.bsky.social ! Over an intense week we: 🔬 Met wonderful new colleagues in #microscopy 📚 Shared #lectures on advanced methods like #FLIM, #Airyscan, #SIM, and #Lightsheet ... 131
Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 15/09/2025👋Welcome to CELLIM on BlueSky! • a core facility for advanced light microscopy @ceitec.eu @masarykuniversity.bsky.social 🔬 Follow us for: • Updates on our microscopy platforms • Insights into imaging methods • Behind-the-scenes highlights • Workshops, courses & more #CEITECScience 0145