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Cellular Imaging Core Facility - CEITEC

@ceitec-cellimcf.bsky.social
164 followers 302 following 36 posts

Light microscopy facility of #CEITEC_Brno #muni_cz. Part of #CzechBioimaging and #EuroBioimaging research infrastructures.

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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 30/06/2026
During the course, we worked with 4 microscopy systems: ZEISS Microscopy Axio Zoom, Axio Imager, and LSM 880, and the Evident Microscopy IXplore SpinSR SoRa. And 3 image processing and analysis software tools: ZEN, Imaris, and ImageJ/Fiji
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 30/06/2026
12 participants 4 microscopes 3 softwares 5 lecturers One microscopy adventure completed! 🔬 Thanks to: Participants, #CELLIMteam, @eurobioimaging.bsky.social, #Czech-BioImaging, @ceitec.eu & @masarykuniversity.bsky.social We are looking forward to seeing you at the 2027 course!
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 23/02/2026
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 23/02/2026
✨ CELLIM Best Microscopy Image Competition 2025 🌟 Honorary award 🌟 💙🔬Awarded to Denisa Belisová from @masarykuniversity.bsky.social 6th edition, and our CELLIM community keeps creating stunning microscopy every day. Some images come so close to the finals, again and again. #Microscopy #BioImage
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 20/02/2026
Final results – 1st place winner: 🥇Sona Cesnarikova from Dasa Bohaciakova lab at @masarykuniversity.bsky.social 🔬#Lightsheet7 🖼️A single z slice selected from a full volume acquired in two channels 🥳Congratulations and thank you for sharing your science with #microscopy community
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 20/02/2026
Final results – 2nd place winner: 🥇Nadiia Puskarova from @hejatko.bsky.social lab at @ceitec.eu 🔬#Lightsheet7 🖼️Orthogonal projection over z dimension acquired in two channels 🥳Congratulations and thank you for sharing your science with #microscopy community
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 20/02/2026
🥳Final results - 2nd place winner: 🥈Nadiia Puskarova from @hejatko.bsky.social lab at @ceitec.eu @masarykuniversity.bsky.social 🔬#Lightsheet7 📷Orthogonal projection over z dimension acquired in two channels 🥳Congratulations and thank you for sharing your science with #microscopy community
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 19/02/2026
Final results - 3rd place winner: 🥉Lucia Tomovicova from @hejatko.bsky.social lab 🔬Zeiss #LSM800 🖼️Color-coded orthogonal projection over z dimension 🥳Congratulations and thank you for sharing your science with #microscopy community!
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 09/02/2026
✨ CELLIM Best Microscopy Image Competition 2025 — FINAL VOTING OPEN! 🏆🔬 6 finalists. Need your help to pick the Best of the Best. 🎥 Watch the video, see images + vote for up to 3: cellim.ceitec.cz/contest-2025... Please share & enjoy microscopy art! 💙 @eurobioimaging.bsky.social @ceitec.eu
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Reposted by Cellular Imaging Core Facility - CEITEC
Institute of Molecular Genetics @imgprague.bsky.social · 04/02/2026
🚀Open PhD position! Join Nenad at IMG and share with us: 💛Experience 🧡Friendship 💙Professionalism 💜PhD community APPLY NOW: img.cas.cz/phd
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 29/01/2026
📸 Best Microscopy Image Competition 2025 | #Matcha -Powdered Green Tea Final dissection of the green with @zeiss-microscopy.bsky.social #AXIOZoom More tea info: mezisalky.cz/product/0000... #BrnoRegion #CzBi @eurobioimaging.bsky.social #microscopy #art #tea Coming up soon: #vote for your favorite
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 27/01/2026
📸 Best Microscopy Image Competition 2025 | Black Tea – Twirled and Pollen-Covered from China This week we start dark, with our ultimate favorite from Mezi Salky✨ #microscopy #bioimage #art #tea #AXIOZoom
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 22/01/2026
📸 Best Microscopy Image Competition 2025 | Green Tea – Japanese Sencha Today we dive into deep green under the @zeiss-microscopy.bsky.social AXIO Zoom Sencha is steamed to lock in its fresh, grassy flavor and green color. More info: mezisalky.cz/product/0000... #microscopy #art #tea #AXIOZoom
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Reposted by Cellular Imaging Core Facility - CEITEC
Tomas Janovic @janovictom.bsky.social · 20/01/2026
First test of live-cell single-molecule imaging in a new lab and it looks very promising!!! Thanks to @ceitec-cellimcf.bsky.social instruments at @ceitec.eu and @masarykuniversity.bsky.social. 🙌 #microscopy #singlemolecule #livecell #newlab
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Reposted by Cellular Imaging Core Facility - CEITEC
FocalPlane @focalplane.bsky.social · 20/01/2026
🔬🔦Our Imaging spotlight from @hiralshah.bsky.social & team highlights their U-ExM atlas of planktonic eukaryotes, including details on how you can explore this wonderful resource. Plus, check out Hiral’s top tips on getting started with expansion microscopy. focalplane.biologists.com/2026/01/20/i...
focalplane.biologists.com
Imaging spotlight: U-ExM atlas of microbial eukaryotes - FocalPlane
Imaging spotlight: U-ExM atlas of microbial eukaryotes - News
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Reposted by Cellular Imaging Core Facility - CEITEC
Lucien Hinderling @lhinderling.bsky.social · 20/01/2026
Real-time control of cell migration with closed-loop feedback, interoperability of smart microscopes, image analysis with Convpaint & our chatGPT microscope! Excited for this meeting!
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 19/01/2026
📸 Best Microscopy Image Competition 2025 | White Tea (wild bushes from Georgia) We put Mezi Šálky white tea under the @zeiss-microscopy.bsky.social AXIO Zoom 🔬 you can spot the fuzzy hairs on the leaves before & after brewing. More at: mezisalky.cz/product/0000... #microscopyart #tea #AXIOZoom
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 06/01/2026
🖼️Dig out your favorite 2025 image! 🥇Win HERO13 GoPro from @zeiss-microscopy.bsky.social 🥈🥉Enjoy „tea meeting“ and store credit from Mezi Šalky 🧪 More info cellim.ceitec.cz/contest-2025... Didn’t work with CELLIM? Help us vote @masarykuniversity.bsky.social @ceitec.eu @eurobioimaging.bsky.social
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 10/12/2025
🏅 Enabled by support by Specion, s.r.o., OptiXs s.r.o., @octagondata.bsky.social , #CzechBioimaging and @chanzuckerberg.bsky.social . Thank you all, and we hope to see you at next year’s #PABI, where we can discover new software features together.
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 10/12/2025
🕐 36+ hours on FIJI, CellProfiler, Imaris, AIVIA, and OMERO. 🌐 An immeasurable amount of good mood & food, gained knowledge, and new connections! We experienced @leicamicrosystems.bsky.social #AIVIA and @dundeeuniunite.bsky.social #OMERO
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 10/12/2025
🎤 11 expert speakers, who guided us through open-source and commercial software. 🧍 20+ participants, from across Czechia together with Germany, Italy, Scotland, Slovakia and Uganda. We worked on @oxfordinstruments.bsky.social #Imaris virtual machines with Julia and Guergana.
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 10/12/2025
#PABI 2025 was successfully completed! Processing and Analysis of Biological Images workshop, organized and executed by #CELLIMteam, @ceitec.eu and CBIA. We learned about detectors, image pre-processing, FAIR data, #CellProfiler and #FIJI #workshop #bioimageanalysis #lightmicroscopy #bioimaging
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 24/11/2025
📣A new paper from users of our core facility. Visit attached post and learn how Stereo and Confocal microscopy can work together to help understand plant embryogenesis. #PlantScience #Microscopy #UserCase #PaperRadar #CEITECscience #MUNI
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 11/11/2025
📢Don't miss out! Your last chance to join CELLIM #workshop 🦄 Bring your data 👥 Learn from field experts 🌐 Data management and sharing #FAIR #EOSC #OneData 💻 #FIJI #Imaris #Aivia #OMERO #AItools More info: ceitec.eu/processing-a... #course #microscopy #image #analysis #software
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Reposted by Cellular Imaging Core Facility - CEITEC
eurobioimaging.bsky.social @eurobioimaging.bsky.social · 28/10/2025
Last month, we attended the "Imaging Principles of Life" / Czech-BioImaging Annual Meeting in Brno 🇨🇿 and got to visit the Multimodal #Imaging Brno Node. An amazing conference & fantastic facility visits! 🤩 @ceitec-cellimcf.bsky.social @ceitec.eu Learn more⤵️ www.eurobioimaging.eu/news/czech-b...
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 31/10/2025
#CELLIMteam members were at @eurobioimaging.bsky.social #EVOLVE #TrainTheTrainer course on advancing core facility training design and delivery. Thanks to organizers, trainers and trainees for great atmosphere and knowledge transfer. #microscopy #training #course #community
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 15/10/2025
Join us for our Processing and Analysis of Biological Images #workshop: four days focused on commercial and open-source #image-analysis software and data management. 🧑‍🎓 Lectures from invited industry specialists 👐 Guided #hands-on session 🦄 Bring your own #data #CzechBioImaging #EuroBioImaging
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 15/10/2025
We stress-tested acquisition speed on our favorite flagellated #protozoa. Lightfield 4D captured full volumes of these fast swimmers with ease. When immobilized, the structural detail was impressive. #imaging #workshop #CEITECscience #MUNI #BRNOregionmicroscopy #CzechBioImaging
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 15/10/2025
We hosted the new @zeiss-microscopy.bsky.social #Lightfield4D with Dr. Pavel Krist. 🧐First impressions: fast, user-friendly, single-snap z-information and outstanding temporal (t) resolution. ♥️Favorite feature: integration with #Airyscan for high-resolution detail capture.
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 03/10/2025
Yesterday, #CELLIMteam had the pleasure of hosting two long term friends Pavel Krist during the @zeiss-microscopy.bsky.social #Lightfield4D workshop, and @olafselchow.bsky.social, for an exchange on the latest developments with the #Lightsheet7. #microscopy #collaboration #CEITECscience
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 03/10/2025
😍 Amazing image, what system was it acquired on?
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 22/09/2025
We also enjoyed a short talk from Pavel Krist #ZEISS on their new #Lightfield4D system. Exciting news: we’ll host a #workshop on this system at CELLIM in October! Stay tuned for details 👀 #Bioimaging #Microscopy #LightMicroscopy #CzechBioImaging #EuroBioImaging
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 22/09/2025
Day 3: #ImagingPrinciplesOfLife electron microscopy We heard talks from Jana Rudá Kučerová on how different substances affect brain function, and Jarmila Navrátilová on her collaboration with the Centre for Biomedical Image Analysis. 📸 Plus, we grabbed a group photo of the #CELLIMteam.
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 22/09/2025
We explored posters from across Czech Republic, and saw the #Tomocube in action with expert guidance from Daniel Ghete & Lenka Šídová #SVENBioLabs. 👏 Big thanks to Baubak Bajoghli #AustrianBioImaging for his inspiring talk on the power of collaboration. 🤝
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 22/09/2025
Tereza Přerovská #MUNI_SCI wowed us with stunning #confocal images of Arabidopsis thaliana, showcasing how imaging drives plant research. 🌱 We explored posters from across Czech Republic, and saw the #Tomocube in action with expert guidance from Daniel Ghete & Lenka Šídová #SVENBioLabs. 👏
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 22/09/2025
Day 2: #ImagingPrinciplesOfLife We kicked off with a fantastic talk by Klára Cigošová #MUNI_MED on the BEE-ST method, developed by Marcos G López in Jan Krivanek’s group showing its power with #MicroCT and #Lightsheet imaging. 🔬 📸 Mouse molar by Marcos González López 🔗 DOI: 10.1126/sciadv.adi0482
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 17/09/2025
We are also happy to showcase the image of mouse embryo motor nerves acquired by Josef Lavicky on our Lightsheet7 microscope. We heard about amazing research behind it from Alena today.
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 17/09/2025
It started #Czechbioimaging conference: Imaging Principles of Life Day 1: Intro to @eurobioimaging.bsky.social #czechbioimaging infrastructures Updates from core facilities 2 invited speakers: Christian Schöfer and Alena Salašová
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 17/09/2025
We also: 💾 Processed more than 1 TB of #imaging data 🧪 Spent two full days in #hands-on microscopy sessions 🏆 Gave out prizes – and had great fun doing it! A huge thank you to all participants and our amazing staff for making this year’s course such a success.
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 17/09/2025
We’ve just wrapped up this year’s Advanced Light Microscopy Methods in Biology workshop at @ceitec.eu @masarykuniversity.bsky.social ! Over an intense week we: 🔬 Met wonderful new colleagues in #microscopy 📚 Shared #lectures on advanced methods like #FLIM, #Airyscan, #SIM, and #Lightsheet ...
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Cellular Imaging Core Facility - CEITEC @ceitec-cellimcf.bsky.social · 15/09/2025
👋Welcome to CELLIM on BlueSky! • a core facility for advanced light microscopy @ceitec.eu @masarykuniversity.bsky.social 🔬 Follow us for: • Updates on our microscopy platforms • Insights into imaging methods • Behind-the-scenes highlights • Workshops, courses & more #CEITECScience
Microscopy image of a cell with labeled cytoskeleton and nuclear componentsZEISS LSM 880 microscope with incubation chamber2 people working on the microscopes2 men looking at monitors with microscopy images
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