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Ben Cooper

@bugwonk.bsky.social
1.8K followers 503 following 40 posts

Professor of infectious disease epidemiology at Centre for Global Health Research, Oxford. 🤓🧀☕️🚴🏼🦠💉💊

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Ben Cooper @bugwonk.bsky.social · 13/08/2026
After all the faffing about with shoeboxes and foil, it turns out all you need for a decent pinhole camera is a tree. Here the tree is behaving like a giant colander and light coming through gaps between the leaves is creating hundreds of images of the eclipse projected onto Abingdon County Hall
Image of light patterns on County Hall, Abingdon showing hundreds of overlapping images of the partial solar eclipse as well as shadows of branches of a tree and shadows of people standing to look at the images. The photo is blurry due to being taken with phone camera with a shattered lens.
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Esther van Kleef @esthervk.bsky.social · 10/08/2026
Changing antibiotic dispensing of #AMR is one thing. But does it actually reduce the problem? Our new paper, part II of the CABU EICO study, is now out! #IDSky #ClinMicro #OpenAccess #OA @ndm.ox.ac.uk @itmantwerp.bsky.social @oxprimarycare.bsky.social
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Centre for Tropical Medicine and Global Health @tropicalmedicine.ox.ac.uk · 07/07/2026
#ResearchHighlight from Cherry Lim @cghr.ox.ac.uk   The burden of antimicrobial-resistant bacterial infections: a causal perspective Read more 👉 ndm.ac/tropmed-res-hi Full publication 👉 www.nature.com/articles/s41...
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Centre for Tropical Medicine and Global Health @tropicalmedicine.ox.ac.uk · 03/06/2026
#ResearchHighlight from Claire Chewapreecha @moru-mip.bsky.social CRISPR-based environmental detection of Burkholderia pseudomallei identifies sanitation gaps and #melioidosis risk in northeast Thailand Read more 👉 ndm.ac/tropmed-res-hi Full publication 👉 www.nature.com/articles/s41...
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Centre for Tropical Medicine and Global Health @tropicalmedicine.ox.ac.uk · 03/06/2026
#MeetOurResearchers video interview with Elizabeth Batty @moru-mip.bsky.social Genomic surveillance in Southeast Asia  Liz research aims to identify causes of febrile illness, monitor AMR and guide appropriate treatments   Watch the interview 👉 ndm.ac/elizabeth-batty-podcast
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Centre for Tropical Medicine and Global Health @tropicalmedicine.ox.ac.uk · 22/04/2026
#MeetOurResearchers video interview with Wirichada Pan ngum @moru-mip.bsky.social Modeling for maximum impact on health research Wirichada leads a modelling group using statistical and mathematical approaches to address regional health challenges Watch 👉 ndm.ac/wirichada-pan-ngum-podcast
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Sabine Dittrich @sdittrich.bsky.social · 19/04/2026
Good start to a conference day when your face pops up during the keynote lecture. @escmid.bsky.social #ESCMIDGlobal2026 #LOMWRU #Rickettsia @innoghe.bsky.social
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Ben Cooper @bugwonk.bsky.social · 17/03/2026
I hope you have told them to watch this video www.youtube.com/watch?v=T4Up...
youtube.com
A Day in the Life of an Ensh*ttificator
YouTube video by Forbrukerrådet - Norwegian Consumer Council
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Ben Cooper @bugwonk.bsky.social · 06/03/2026
That's very kind of you. I'm obviously not paying to read more of that, but the Uta Frith interview she refers to is worth reading and thinking about whether you agree with it or not: www.tes.com/magazine/tea...
tes.com
Uta Frith: why I no longer think autism is a spectrum
The autism spectrum has widened to the point of collapse, affecting how teachers should support autistic pupils in the classroom, researcher Uta Frith tells Helen Amass
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Ben Cooper @bugwonk.bsky.social · 22/02/2026
also statmodeling.stat.columbia.edu/2026/02/19/t...
statmodeling.stat.columbia.edu
The 80% power lie | Statistical Modeling, Causal Inference, and Social Science
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Ben Cooper @bugwonk.bsky.social · 20/02/2026
Yes! I liked this perspective journals.plos.org/plosbiology/...
journals.plos.org
Is scientific reform an unwinnable arms race?
Methodological improvements should, in theory, mean more robust evidence and inference, and more rapid advances in knowledge. However, these methods are often subsequently used in the pursuit of publi...
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Ben Cooper @bugwonk.bsky.social · 20/02/2026
Well, maybe you have more faith in power calculations than I do. If you're not convinced by 0.051 surely you should only be very slightly more convinced by 0.049. For decision-making, why not take a Bayesian perspective, look at the posterior distribution and evaluate utility of different decisions?
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Ben Cooper @bugwonk.bsky.social · 20/02/2026
so p=0.049 means that it works and p=0.051 means that it doesn't then? 🤔
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Centre for Tropical Medicine and Global Health @tropicalmedicine.ox.ac.uk · 21/01/2026
#ResearchHighlight from Yewei Xie & Mo Yin @moru-mip.bsky.social One health perspective of antibiotic resistance in enterobacterales from Southeast Asia: a systematic review and meta-analysis Read more 👉 www.ndm.ac/tropmed.res-hi Full publication 👉 www.nature.com/articles/s41...
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Eric Topol @erictopol.bsky.social · 21/01/2026
The new cover and feature @nature.com www.nature.com/immersive/d4...
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The Global Health Network @tghn-news.bsky.social · 08/01/2026
Webinar: AMR tools and resources: An introduction for health professionals and researchers 📅 Date: 29 January 2026 👉 09:30–11:00 GMT Register: zoom.us/webinar/regi... 👉 15:00–16:30 GMT Register: zoom.us/webinar/regi...
WEBINAR
AMR tools and resources:
An introduction for health professionals and researchers
29th January 2026
Antimicrobial resistance (AMR) is a pressing global health challenge, and access to high-quality data and analytical tools is essential for effective decision-making. This webinar introduces key resources designed to support researchers, health professionals, and policy partners working to understand and address AMR.
Two identical sessions available to enable global participation. Please register for the time that best suits you.
Session 1:
09:30 - 11:00 (GMT)
Session 2:
15:00 - 16:30 (GMT)
REGISTER NOW
GRAM
IDDO
THE GLOBAL HEALTH NETWORK
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Esther van Kleef @esthervk.bsky.social · 20/12/2025
New PREPRINT! tinyurl.com/yynzevrh Thanks to a true transdisciplinary collaboration, we developed and evaluated a low-cost community #AMR intervention set in rural Burkina Faso and DRCongo. Combining #WHO #AWaRe–based feedback/training (medicine providers) and AMR awareness campaigns (community).
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Centre for Tropical Medicine and Global Health @tropicalmedicine.ox.ac.uk · 10/12/2025
#ResearchHighlight from Phaik Yeong Cheah @moru-mip.bsky.social Engagement and justice considerations in mitigation of antimicrobial resistance #AMR Read more 👉 www.ndm.ac/tropmed.res-hi Full publication 👉 www.cell.com/trends/micro...
Phaik Yeong Cheah
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Infectious Diseases Data Observatory (IDDO) @iddonews.bsky.social · 02/12/2025
✨ Exciting news! ✨ Our website just got a fresh new makeover! 🙌 We’ve reorganised things to make everything easier to find, smoother to navigate & more enjoyable to explore. Plus we’ve launched an new blog section! Take a look around & let us know what you think 👉 www.iddo.org
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Ben Cooper @bugwonk.bsky.social · 02/12/2025
Super exciting opportunity to work on an ambitious project both developing novel statistical methodology for infectious diseases and applying it to real world AMR problems in the UK: jobs.nottingham.ac.uk/vacancy.aspx...
jobs.nottingham.ac.uk
Job Vacancy at the University of Nottingham: Research Associate/Fellow in Statistics (Fixed Term)
We are looking for a highly motivated researcher, whose expertise lies in statistics, to work with Prof Theodore Kypraios on a project at the forefront of infectious disease modelling. The role focuse...
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gram-oxford.bsky.social @gram-oxford.bsky.social · 20/11/2025
The AMR data repository, supported by Fleming Fund and Wellcome Trust, now covers nearly 70 countries! Apply today to use this data in your research. #GRAM #WAAW Data: see QR code Story: bit.ly/4o4oNkz @bugwonk.bsky.social @wellcometrust.bsky.social @tropicalmedicine.ox.ac.uk @ndm.ox.ac.uk
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brecht ingelbeen @ingelbeen.bsky.social · 23/06/2025
Open position for an ID modeler @itmantwerp.bsky.social on community-level + healthcare transmission of resistant #AMR bacteria in LRS, working with Clinical Research Unit Nanoro, @esthervk.bsky.social, @bugwonk.bsky.social, KEMRI-wellcome Kilifi, myself,... #IDSky #EpiSky www.itg.be/en/jobs-and-...
itg.be
Epidemiologist
Epidemiologist for modelling AMR transmission in LMICMore than 500 staff members at the Institute of Tropical Medicine (ITM) contribute e...
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Ben Cooper @bugwonk.bsky.social · 14/06/2025
Congratulations to Sai Thein Than Tun @tropicalmedicine.ox.ac.uk ‬for passing his PhD viva & overcoming some formidable obstacles in the process. Sai’s work on malaria elimination is a great example of simple models supporting clear thinking about complex processes link.springer.com/article/10.1...
Screenshot from viva for DPhil candidate Sai Thein Than Tun with examiners Ben Cooper and Jennifer Flegg. All are smiling as Sai has just passed his viva with minor corrections and the examiners were hugely impressed at the quality of the work .
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Ben Cooper @bugwonk.bsky.social · 01/05/2025
Many hospitals in LMICs lack access to microbiology services. @cherrylim128.bsky.social et al asked if such services are a good use of limited resources. The answer: emphatically yes. Such services are likely to improve patient outcomes & reduce overall costs. www.sciencedirect.com/science/arti...
sciencedirect.com
Cost-effectiveness of maintaining an active hospital microbiology laboratory service in Timor-Leste
Maintaining an active hospital microbiology laboratory allows definitive antibiotic treatment for bacterial infections to be given in a timely manner.…
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Ben Cooper @bugwonk.bsky.social · 06/04/2025
A final feeling. While walking by the Thames in Abingdon last Sunday evening Joe heard drums in the distance & led me to this fallen dismembered tree, the site of an amazing one performer free festival and, despite all the amputations, a moment of pure contemplation & sensory delight.
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Ben Cooper @bugwonk.bsky.social · 06/04/2025
@laylamoran.bsky.social as our local MP & chair of the HSCC it would be great if you could help promote Joe’s fundraising for this brilliant local charity, highlight the lack of out of school support for some of those who need it most & read John’s brilliant book www.theguardian.com/books/2025/m...
theguardian.com
Maybe I’m Amazed by John Harris review – with a little help from John, Paul, George and Ringo
The Guardian journalist’s tender account of how music became a bridge between him and his autistic son, James, is full of wit and wisdom
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Ben Cooper @bugwonk.bsky.social · 06/04/2025
Joe has been attending Yellow Submarine 1 day/wk in holidays since 2019. He loves it, but last December Oxfordshire County Council told us they would no longer support YS to work with children needing 1-1 support, so kids like Joe who need to be active and outside currently have nowhere to go.
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Ben Cooper @bugwonk.bsky.social · 06/04/2025
but since Joe doesn’t believe in lying back & saying how bad his luck is he’ll be running his first 10k in July to support amazing local charity, Yellow Submarine www.yellowsubmarine.org.uk. Please sponsor him if you can bit.ly/3G24aF9 repost if you can’t & visit their awesome Oxford cafe.
board full of text explaining all the amazing things Oxfordshire charity Yellow Submarine does to support young people and adults with learning disabilities and autism to lead full lives
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Ben Cooper @bugwonk.bsky.social · 06/04/2025
he’s been listening on his headphones to Hard Times Come Again No More from Yo-Yo Ma’s Appalachian Journey www.youtube.com/watch?v=by3d.... The hardest part of all is how little support kids like Joe get: no breakfast clubs, no music lessons, and now no holiday clubs …
youtube.com
Hard Times Come Again No More
YouTube video by Yo-Yo Ma - Topic
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Ben Cooper @bugwonk.bsky.social · 06/04/2025
I particularly welcomed the book’s pushback against Daniel Levitin’s claims about which DSM categories do/don’t respond emotionally to music. Joe, who has an ASD diagnosis should he care to use it, often suddenly bursts into tears and tells me “I feel sad”. Every single time it has the same cause:
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Ben Cooper @bugwonk.bsky.social · 06/04/2025
…from using Eddy Grant’s Police on My Back (Sandinista! version obvs) as a teaching aid, to amazement at the intensity of Joe’s musical engagement and the exuberance of his musical creativity, to the great leaps forward enabled by modern ABA.
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Ben Cooper @bugwonk.bsky.social · 06/04/2025
What an incredible piece of music. Joe was transported. I was also transported by John’s book, a paean to the power of music to shape our lives and bring us together across neurological divides. It is deeply moving, particularly so for me because of the congruences with our family’s experiences…
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Ben Cooper @bugwonk.bsky.social · 06/04/2025
Kudos to 16yo son, Joe, who has a learning disability due to #ADNP syndrome, for completing his 50th #parkrun last week in Abingdon. Inspired by @johnharris1969.bsky.social ’s new book Maybe I'm Amazed www.bbc.co.uk/sounds/serie... Joe’s post-run chill-out was spent drumming to Kraftwerk’s Autobahn.
Joe running in a parkrun event in a field next to the Thames in AbingdonJoe lost in music while listening to Kraftwerk's Autobahn and drumming on a small Kenyan drum. In the background is John Harris's book Maybe I'm amazed next to lava lamp
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Infectious Diseases Data Observatory (IDDO) @iddonews.bsky.social · 17/03/2025
Track news reports of #SubstandardMedicines and #FalsifiedMedicine in your country. View our Medicine Quality Monitoring Globe, which filters by key words, time-periods, locations, and language. #medswecantrust @tropicalmedicine.ox.ac.uk @wellcometrust.bsky.social @moru-mip.bsky.social
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Ben Cooper @bugwonk.bsky.social · 16/03/2025
This is Joe at a glampsite in Hay-on-Wye last summer. My cousin, an in-demand bohemian luthier and (naturally) resting actor who lives in Frome (www.linkedin.com/in/laurence-...) calls him a lumber drummer 🤩
Joe, a 16 year old neurodivergent boy, deeply lost in music, plays a drum set assembled from from roughly cut lumber in front of a tree covered with ivy in a style that combines the instinctual energy of Moe Tucker, legendary drummer from the Velvet Underground, with the distinctive hi-hat style of Topper Headon, legendary drummer from The Clash.
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Ben Cooper @bugwonk.bsky.social · 16/03/2025
As a recovering Velvets & Clash obsessive, Hay & Frome fanboy, dad to a neurodivergent 16yo musicophile & having been through the whole dehumanising ASD diagnosis thing (🤮) this resonates on SO many levels. For Joe, since he was about 5 yrs old, this has been THE song www.youtube.com/watch?v=Z680...
youtube.com
Smells Like Teen Spirit - The Ukulele Orchestra of Great Britain
YouTube video by UkuleleOrchestra
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Ben Cooper @bugwonk.bsky.social · 16/03/2025
Thanks to Oraya Srimokla & cherrylim128.bsky.social for making the pictured Shiny App at such short notice (based on this paper www.medrxiv.org/content/10.1...). Also to other Oxford faculty Gisela Robles Aguilar and @missotuko.bsky.social & to IHME colleagues who we shared the teaching with.
Rachel Otuko (@missotuko.bsky.social), on the left of the picture, an Oxford DPhil student and teacher on the workshop explains a graph plotted on the laptop screen to a student from the Africa CDC attending the workshop. The room is filled with other students who are deep in thought while staring at computer screens which are running the same R Shiny Application.
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Ben Cooper @bugwonk.bsky.social · 16/03/2025
Just back from teaching on a 4 day policy-focused AMR workshop in Nairobi hosted by the brilliant cema-africa.uonbi.ac.ke (with generous funding from @wellcometrust.bsky.social). Great to meet so many inspiring people from throughout Africa working to reduce the number of lives lost to #AMR.
students on short course point at laptop screens which is running an R Shiny web application about cost-effectiveness of maintaining a microbiological diagnostic lab which is based on this paper https://www.medrxiv.org/content/10.1101/2024.05.14.24307355v1
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Centre for Tropical Medicine and Global Health @tropicalmedicine.ox.ac.uk · 04/03/2025
#ResearchHighlight from Mo Yin @moru-mip.bsky.social Cost-effectiveness of a short-course #antibiotic treatment strategy for the treatment of ventilator-associated #pneumonia: an economic analysis of the #REGARDVAP trial Read more 👉 www.ndm.ac/tropmed.res-hi 👉 www.thelancet.com/journals/lan...
Mo Yin
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Infectious Diseases Data Observatory (IDDO) @iddonews.bsky.social · 21/02/2025
Are you researching #InfectiousDiseases #EmergingInfections #malaria or #NTDs? The datasets we host harmonise tens of thousands of individual patient data, enabling researchers to answer new questions from existing data. Learn more www.iddo.org/data-sh... #BeatNTDs
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Ben Cooper @bugwonk.bsky.social · 04/02/2025
Love it! I wish more schools would get this. My 16yo son, Joe, who has HVDAS, ASD etc, also fears hand dryers but is transported by nature & music to an extent I didn’t even see in my dad who devoted half his life to the guitar www.theguardian.com/theguardian/... We need to get out to the mountains.
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Ben Cooper @bugwonk.bsky.social · 02/02/2025
Blackadder definitely a good start Cunk on Britain on the iplayer (my 11 year old’s favourite) is hard to beat www.bbc.co.uk/programmes/b...) David Olusoga (my wife’s favourite when she was cramming for her test last year) is also consistently great www.bbc.co.uk/programmes/p...
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Jonathan Ryder, MD @jonathanrydermd.bsky.social · 30/01/2025
Systematic review of antibiotic durations in @jac-amr.bsky.social n=315 RCTs 85% demonstrated equivalence or non-inferiority of shorter therapy Only 7% in ICU, 14% in LMIC, and 15% low risk of bias academic.oup.com/jacamr/artic...
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Ben Cooper @bugwonk.bsky.social · 09/01/2025
Agree with Tom. I'm getting on pretty well with one of these www.brooksengland.com/en_uk/c15-ca...
brooksengland.com
C15 Carved, cambium saddle with hole - Brooks England
The Cambium C15 Carved is designed for pressure relief and is suitable for everything from bikepacking to bike touring, gravel, road and urban cycling and is ready for all rides, all weathers.
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Ben Cooper @bugwonk.bsky.social · 15/12/2024
I know this is pedantic, but surely that's #TreeByTrike This is #TreeByBike :
Christmas tree being carried on the basket of a green Elephant Bike (a reconditioned posties bike)
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Ben Cooper @bugwonk.bsky.social · 11/12/2024
Hoorah! Congratulations again!
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Ricardo León-Sampedro @rleonsampedro.bsky.social · 11/12/2024
🚨 New preprint!! How can antibiotic-resistant bacteria increase in abundance in the human gut microbiome, even without antibiotics? 🧐 We show that strain-specific ecological interactions are key to understanding resistance dynamics in microbial communities. 🧵👇 1/5 www.biorxiv.org/content/10.1...
biorxiv.org
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Ben Cooper @bugwonk.bsky.social · 30/11/2024
Amazing!
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Marc Bonten @marcbonten.bsky.social · 26/11/2024
Seven is the new fourteen..... for days of antibiotic treatment of bloodstream infections? Read my new post, inspired by the BALANCE study published in NEJM 👇 letstalkscience.eu/2024/11/26/s...
letstalkscience.eu
Seven is the new fourteen - Let's talk science with Marc Bonten
Some think of medicine, or at least antibiotic treatment duration, as a religion. In the Bible “seven” stands for completeness (I got that from Wikipedia), and therefore infections should be treated w...
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Centre for Tropical Medicine and Global Health @tropicalmedicine.ox.ac.uk · 20/11/2024
#MeetOurResearchers interview with Proochista Ariana @ndmoxford.bsky.social Building capacity for #GlobalHealth impact Our MSc in International Health and Tropical Medicine fosters effective solutions & global health leadership Watch the video 👉 www.tropicalmedicine.ox.ac.uk/wall-of-face...
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