Sign in

Sam Wilkinson

@biowilko.bsky.social
357 followers 146 following 5 posts

Bioinformatician, CLIMB-TRE dev, CLIMB-COVID admin. Likes food, movies, music, and writing code. He/Him.

PostsRepliesMedia
Reposted by Sam Wilkinson
ARTIC network @artic.network · 01/07/2026
Important read from ARTIC PI Placide Mbala (INRB) and @krutikakuppalli.bsky.social in @statnews.com, on what the Bundibugyo Ebola outbreak reveals about the limits of pathogen-specific diagnostics, and why we need pathogen-agnostic systems for the next emergency www.statnews.com/2026/07/01/e...
statnews.com
What Ebola and Marburg are teaching us about the next pandemic
“What is urgently needed is a shift from pathogen-specific diagnostics toward pathogen-agnostic diagnostic systems,” write Krutika Kuppalli and Placide Mbala.
01510
Reposted by Sam Wilkinson
ARTIC network @artic.network · 17/03/2026
Thanks for the great response to last week’s job post. We have another opportunity to share. This one is a Senior Research Technician role at the University of Birmingham, helping us build the ARTIC primer foundry facility: edzz.fa.em3.oraclecloud.com/hcmUI/Candid...
edzz.fa.em3.oraclecloud.com
Senior Research Technician - School of Biosciences - 107150 - 8975
This role sits within the ARTIC network project (https://artic.network/), a global initiative that develops and supports genomic surveillance for outbreak response. Based in the School of Biosciences,...
124
Reposted by Sam Wilkinson
Willem van Schaik @wvschaik.bsky.social · 04/03/2026
The traditional sign Spring has started in Birmingham. @pathogenomenick.bsky.social and his group are having pizzas outside
2151
Reposted by Sam Wilkinson
Pathoplexus @pathoplexus.org · 27/08/2025
🗓 Pathoplexus turns ONE! 🎂🎉 In the past year we’ve grown from 4 pathogens to a truly global, community-driven platform for transparent, equitable & impactful pathogen sequence sharing. 📰 Read the full update: pathoplexus.org/news/2025-08... 1/10
An image of a birthday cake with scientific doodles around it, 9 colourful candles, and the Pathoplexus logo in the middle, with the words 'Happy 1 year'
13820
Reposted by Sam Wilkinson
Nick Loman @pathogenomenick.bsky.social · 22/05/2025
Absolutely thrilled to announce the launch of ARTIC2 - a £5.5M 5 year project funded by @wellcometrust.bsky.social to build on the ARTIC approach of low-cost, globally accessible genome sequencing for surveillance of outbreaks, epidemics and endemic diseases: www.birmingham.ac.uk/news/2025/am...
birmingham.ac.uk
Ambitious project to develop low-cost genome sequencing for pathogens known and unknown - University of Birmingham
Project will build on research that helped diagnostic labs to adopt sequencing capacity for COVID-19 and permit characterisation of future infectious threats
722980
Sam Wilkinson @biowilko.bsky.social · 30/01/2025
It's great to see the proper announcement of something we have been working on for so long! @pathogenomenick.bsky.social @meerac.bsky.social @rmcolq.bsky.social @arambaut.bsky.social and many others 😁
gov.uk
UKHSA launches new metagenomic surveillance for health security
The UK launches mSCAPE, a world-first metagenomics initiative by UKHSA to enhance health security through rapid pathogen detection and surveillance.
2172
Reposted by Sam Wilkinson
Torsten Seemann @torstenseemann.bsky.social · 13/01/2025
Don't know who to follow for the best in microbial bioinformatics? This is the Starter Pack you need! bsky.app/starter-pack...
02713
Reposted by Sam Wilkinson
Ian Dunt @iandunt.bsky.social · 13/01/2025
Right let's try that again: Amyl and the Sniffers are fucking outstanding. Just outstanding.
181752
Sam Wilkinson @biowilko.bsky.social · 13/01/2025
I've written a quick post about the recent changes to the @articnetwork.bsky.social fieldbioinformatics pipeline virological.org/t/fieldbioin...
virological.org
Fieldbioinformatics Updates
> Fieldbioinformatics updated to 1.6.0 Fieldbioinformatics has been the first line recommendation by the artic network for generation of consensus sequences from Nanopore viral amplicon sequencing d...
0173
Reposted by Sam Wilkinson
ARTIC network @artic.network · 27/08/2024
ARTIC #mpox resources! Guides to setup #sequencing #bioinformatics and #analysis artic.network/mpxv/resources #wellcometrust #nanopore #illumina #molecularepidemiology #pathogen #pathogensurviellance #bioinformatics #epidemiology #virus #outbreak #clinicalvirology
076
Sam Wilkinson @biowilko.bsky.social · 31/10/2023
The COVID inquiry is getting SPICY, domcum burning everything down because they scorned him is too fun
041