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biofinder.bsky.social

@biofinder.bsky.social
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biofinder.bsky.social @biofinder.bsky.social · 12/06/2026
5️⃣ Big thanks to all co-authors! www.medrxiv.org/content/10.6...
medrxiv.org
Generating synthetic tau-PET scans in Alzheimer’s disease from MRI, blood biomarkers and demographics with deep learning
Tau protein aggregation in the brain is a hallmark of Alzheimer’s disease (AD). Positron emission tomography (PET) is the only in vivo method to visualize tau pathology and estimate both its burden an...
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biofinder.bsky.social @biofinder.bsky.social · 12/06/2026
4️⃣ Want to try it out yourself? The trained model and project code is openly available on GitHub for research use (License: CC BY-NC)! 🐙
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biofinder.bsky.social @biofinder.bsky.social · 12/06/2026
3️⃣ Synthetic scans showed high potential in clinically relevant tasks such as predicting progression to dementia in cognitively unimpaired individuals.
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biofinder.bsky.social @biofinder.bsky.social · 12/06/2026
2️⃣ Synthetic scans showed high agreement with true scans regarding both tau load and distribution. Performance was highest when using only MRI, age and plasma p-tau217 as input, but also strong with only MRI and age.
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biofinder.bsky.social @biofinder.bsky.social · 12/06/2026
1️⃣ We assembled data from 13 Alzheimer's disease cohorts covering a broad spectrum of clinical diagnoses (~5000 individuals) and systematically optimized a 3D U-Net model, evaluated on held-out test data.
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biofinder.bsky.social @biofinder.bsky.social · 12/06/2026
📢 New preprint from BioFINDER, led by @karlssonlinda1.bsky.social! We trained a deep learning model to generate synthetic tau-PET 3D scans from more accessible data: structural MRI, plasma p-tau217, and age. medrxiv.org/content/10.6...
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biofinder.bsky.social @biofinder.bsky.social · 02/06/2026
This study was led by María Rivera Sánchez. A huge thanks to all co-authors: @rikossenkoppele.bsky.social, and those not on bsky.
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biofinder.bsky.social @biofinder.bsky.social · 02/06/2026
New paper in Neurology! We investigated whether future AD dementia can be predicted in individuals with subjective cognitive decline. We found that plasma p-tau217, cognitive testing, and APOE ε4 status accurately identify those at highest risk. neurology.org/doi/pdf/10.1...
neurology.org
The Role of Clinical, Plasma, and Imaging Biomarkers in Assessing Future Dementia Risk in Individuals With Subjective Cognitive Decline | Neurology
Background and ObjectivesSubjective cognitive decline (SCD) is a well-recognized risk state for developing mild cognitive impairment (MCI) and dementia. Optimal risk stratification for early intervent...
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biofinder.bsky.social @biofinder.bsky.social · 27/05/2026
A huge thank you to all co-authors and collaborators for their incredible work on this project. @suzanneeschindler.bsky.social @rikossenkoppele.bsky.social
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biofinder.bsky.social @biofinder.bsky.social · 27/05/2026
This supports the potential of blood-based biological staging as scalable alternative to PET imaging for AD characterization. This approach may improve participant stratification for clinical trials and facilitate broader implementation of biological staging in clinical practice.
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biofinder.bsky.social @biofinder.bsky.social · 27/05/2026
4️⃣ Plasma stages were strongly associated with cognitive impairment, neurodegeneration, tau accumulation, longitudinal disease progression, and neuropathological measures of Alzheimer’s disease at autopsy.
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biofinder.bsky.social @biofinder.bsky.social · 27/05/2026
3️⃣ Importantly, the two-biomarker model outperformed a model based on %p-tau217 alone, particularly for identifying individuals in the intermediate tau stage (A+TMOD+), which may represent a therapeutically relevant window for current anti-amyloid treatments.
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biofinder.bsky.social @biofinder.bsky.social · 27/05/2026
2️⃣ %p-tau217 was most informative for identifying early amyloid-related stages, while eMTBR-tau243 improved detection of intermediate and advanced tau pathology.
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biofinder.bsky.social @biofinder.bsky.social · 27/05/2026
1️⃣ A plasma model combining %p-tau217 and eMTBR-tau243 showed high concordance with PET-based biological staging across independent cohorts.
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biofinder.bsky.social @biofinder.bsky.social · 27/05/2026
Using data from the BioFINDER-2 cohort and an independent validation cohort (Knight ADRC), we investigated whether plasma biomarkers could approximate the recently proposed amyloid- and tau-PET–based Alzheimer’s disease staging framework in a scalable and minimally invasive way.
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biofinder.bsky.social @biofinder.bsky.social · 27/05/2026
New publication in JAMA Neurology! 🧠 In this study, led by @gsalvado.bsky.social, we developed and validated a plasma-based biological staging model for Alzheimer’s disease using two blood biomarkers: %p-tau217 and eMTBR-tau243. jamanetwork.com/journals/jam...
jamanetwork.com
Plasma eMTBR-tau243 and %p-tau217 for Biological Staging of Alzheimer Disease
This longitudinal study develops and validates a blood plasma–based biological staging model for Alzheimer disease that closely mirrors an amyloid and tau positron emission tomography–based staging sy...
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biofinder.bsky.social @biofinder.bsky.social · 15/05/2026
A big thanks to all authors and collaborators! @anlijuncn.bsky.social, @rikossenkoppele.bsky.social
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biofinder.bsky.social @biofinder.bsky.social · 15/05/2026
Using large-scale proteomics across multiple cohorts, we found that APOE ε4 and APOE ε2 have largely distinct protein signatures. Many changes appeared even before detectable Aβ pathology, suggesting that APOE-related molecular alterations may begin long before dementia develops.
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biofinder.bsky.social @biofinder.bsky.social · 15/05/2026
New paper in Nature Aging led by PhD student Lina Lu! We mapped how APOE ε4 and APOE ε2 shape molecular changes in blood and cerebrospinal fluid across Alzheimer’s disease. www.nature.com/articles/s43...
nature.com
Proteomic signatures of the APOE ε4 and APOE ε2 genetic variants and Alzheimer’s disease - Nature Aging
Apolipoprotein E (APOE) is the strongest genetic influence in Alzheimer’s disease (AD). Compared to the most frequent allele, ε3, the ε4 allele increases AD risk, and the ε2 allele is protective. Here...
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biofinder.bsky.social @biofinder.bsky.social · 29/04/2026
Big thanks to all authors and collaborators! @gsalvado.bsky.social @suzanneeschindler.bsky.social @rikossenkoppele.bsky.social
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biofinder.bsky.social @biofinder.bsky.social · 29/04/2026
New paper in Nature Communications! We mapped trajectories of multiple tau species in plasma & CSF across the AD continuum. Different tau species change at distinct stages: %p-tau217 earliest, MTBR-tau243 later, highlighting stage-specific biology. www.nature.com/articles/s41...
nature.com
Trajectories of plasma and CSF MTBR-tau243 and phosphorylated-tau species across the Alzheimer’s disease continuum - Nature Communications
Plasma and CSF p-tau biomarkers show similar dynamics across Alzheimer’s disease progression, though plasma %p-tau217 and eMTBR-tau243 show less ceiling effect than CSF. Combining %ptau217, %p-tau205,...
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biofinder.bsky.social @biofinder.bsky.social · 09/04/2026
This study was led by Beata Borgström Bolmsjö and Sebastian Palmqvist. A big thanks to all collaborators and co-authors! @suzanneeschindler.bsky.social
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biofinder.bsky.social @biofinder.bsky.social · 09/04/2026
New publication alert! Are patients seen in primary care eligible for amyloid-targeting therapies (ATT) for treatment of Alzheimer’s disease? 🧠We evaluated ATT eligibility among patients with cognitive symptoms in primary care in southern Sweden.
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biofinder.bsky.social @biofinder.bsky.social · 08/04/2026
The study was led by Sophie Mastenbroek, a huge thank you to all co-authors: @teanijarv.bsky.social, @jorittmo.bsky.social, @jwvogel.bsky.social, @rikossenkoppele.bsky.social, and all not on bsky.
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biofinder.bsky.social @biofinder.bsky.social · 08/04/2026
New publication out in Brain! 📢We developed a data-driven multimodal biomarker framework to characterize a memory clinic cohort based on the presence, extent, and sequence of common pathologies. This framework may support diagnosis and trial selection. 🔗https://doi.org/10.1093/brain/awaf411
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biofinder.bsky.social @biofinder.bsky.social · 07/04/2026
The study was led by Linda Karlsson, a huge thank you to all co-authors @suzanneeschindler.bsky.social, @jwvogel.bsky.social, @gsalvado.bsky.social, @alexapb.bsky.social, and all not on BlueSky 🔗 academic.oup.com/brain/advanc...
academic.oup.com
Validate User
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biofinder.bsky.social @biofinder.bsky.social · 07/04/2026
New publication out in Brain! 📢 We found that reference proteins Aβ40 and np-tau consistently helped already high-performing fluid biomarkers (e.g., MTBR-tau243 and p-tau variants) to more reliably represent brain Aβ and tau pathology measured by PET. 🔗 academic.oup.com/brain/advanc...
academic.oup.com
Validate User
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biofinder.bsky.social @biofinder.bsky.social · 09/02/2026
This work was lead by @pavanchaggar.bsky.social, @jwvogel.bsky.social, Niklas Mattsson-Carlgren, Oskar Hansson, and @alaingoriely.bsky.social, and thanks to coauthors @rikossenkoppele.bsky.social, @saadjbabdi.bsky.social + those not on bluesky!
pavanchaggar.bsky.social
Pavan Chaggar (@pavanchaggar.bsky.social)
Mathematician and neuroscientist working on Alzheimer’s disease Currently at Lund University, previously at Ox Maths
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biofinder.bsky.social @biofinder.bsky.social · 09/02/2026
Key takeaways: * Our ATN model fits regional biomarker progression in BF and ADNI. * Braak-like tau staging emerges from network spread and Aβ-driven production. * Aβ/tau colocalisation precedes rapid cortical tau spread. * Simulated Aβ intervention before colocalisation shows increased benefit.
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biofinder.bsky.social @biofinder.bsky.social · 09/02/2026
New BioFINDER preprint! We formalise the Aβ–tau–neurodegeneration (ATN) framework into a mechanism-based model of Alzheimer’s disease, enabling us to simulate longitudinal imaging biomarkers and study how disease processes evolve and interact across the AD continuum. www.biorxiv.org/content/10.6...
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biofinder.bsky.social @biofinder.bsky.social · 02/12/2025
The study was led by Niklas Mattsson-Carlgren, Linda Karlsson and Weizhong Tang. Thank you to all co-authors: Kaj Blennow, Henrik Zetterberg, Randall Bateman, Suzanne Schindler, Nicolas Barthelemy, Sebastian Palmqvist, Erik Stomrud, Shorena Janelidze, and Oskar Hansson.
embopress.org
Prediction of continuous amyloid positron emission tomography with fluid measures of phosphorylated tau and β-amyloid | EMBO Molecular Medicine
imageimageMachine-learning models using CSF and plasma biomarkers accurately predicted quantitative Aβ-PET burden. Distinct contributions of soluble Aβ42/Aβ40 and plasma P-tau217 reveal their role in ...
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biofinder.bsky.social @biofinder.bsky.social · 02/12/2025
Main takeaway: CSF Ab42/Ab40 and plasma p-tau217 showed distinct contributions when predicting Aβ-PET, improving our understanding of disease progression and guiding how biomarkers can be applied in clinical and research settings.
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biofinder.bsky.social @biofinder.bsky.social · 02/12/2025
New paper out in EMBO Mol Med! We use machine learning to predict Aβ-PET burden from fluid biomarkers. www.embopress.org/doi/full/10.... Key findings: - Performance R² = 0.79 - CSF Aβ42/Aβ40 most predictive of Aβ plaque presence - Plasma p-tau217 best for tracking increasing amyloid plaque burden
embopress.org
Prediction of continuous amyloid positron emission tomography with fluid measures of phosphorylated tau and β-amyloid | EMBO Molecular Medicine
imageimageMachine-learning models using CSF and plasma biomarkers accurately predicted quantitative Aβ-PET burden. Distinct contributions of soluble Aβ42/Aβ40 and plasma P-tau217 reveal their role in ...
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biofinder.bsky.social @biofinder.bsky.social · 29/10/2025
💡 Takeaway: • NfL is robust but not sufficient alone in low-prevalence settings. • Diagnostic and prognostic frameworks should move toward standardized multimodal models integrating fluid #biomarkers with established predictors. #ALS #MND
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biofinder.bsky.social @biofinder.bsky.social · 29/10/2025
🚨Paper Out! Systematic Review & Meta-analysis of ALS Fluid Biomarkers 🧵Key findings: • NfL leads for both diagnosis (AUC 0.81–0.92) & prognosis (HR 2.8–4.3) • CSF chitinases, p-tau/t-tau: moderate values • Marked heterogeneity onlinelibrary.wiley.com/doi/10.1111/...
onlinelibrary.wiley.com
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biofinder.bsky.social @biofinder.bsky.social · 27/10/2025
A huge thanks to all co-authors: Lyduine Collij, Niklas Mattson-Carlgren, Shorena Janelidze, @rikossenkoppele.bsky.social, and Oskar Hansson.
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biofinder.bsky.social @biofinder.bsky.social · 27/10/2025
🚨New publication in Alzheimer's & Dementia! In this perspective paper, we discuss whether Aβ blood biomarkers can replace the accepted reference standard, Aβ-PET, for assessing Aβ burden. 🔗Full paper: alz-journals.onlinelibrary.wiley.com/doi/10.1002/...
alz-journals.onlinelibrary.wiley.com
Complementary utility of plasma biomarkers and Aβ‐PET for diagnosis, risk‐stratification, and treatment monitoring in Alzheimer's disease
With the rapid development of blood biomarkers (BBMs) related to amyloid-β (Aβ) pathology in Alzheimer's disease (AD), the question arises whether these can replace the accepted reference standard, ...
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biofinder.bsky.social @biofinder.bsky.social · 07/10/2025
🚨New publication in Brain Communications! In this study led by Atul Kumar, we show that microglial cells play a key role in Alzheimer's disease, particularly in regulating changes in soluble tau, based on cell-type-specific genetic evidence. 🔗Full paper: academic.oup.com/braincomms/a...
academic.oup.com
Cell-weighted polygenic risk scores are associated with β-amyloid and tau biomarkers in Alzheimer’s disease
Kumar et al. report distinct cellular effects on measures of β-amyloid and tau. Importantly, they also found cell-level genetic evidence for a role for mic
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biofinder.bsky.social @biofinder.bsky.social · 16/09/2025
🙏Many thanks to all collaborators in this large study including 12 international cohorts!
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biofinder.bsky.social @biofinder.bsky.social · 16/09/2025
🎯The use of plasma p-tau217 will reduce resource demands and burdensome procedures accelerating the development and implementation of early AD therapeutics.
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biofinder.bsky.social @biofinder.bsky.social · 16/09/2025
5️⃣ In conclusion, our results support the clinical utility of plasma p-tau217 as stand-alone tool for identifying preclinical AD but adding confirmatory CSF/PET would further improve PPVs as needed in many clinical applications.
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biofinder.bsky.social @biofinder.bsky.social · 16/09/2025
4️⃣ Finally, in a subsample we tested whether mass-spectrometry (MS) based methods would improve the results compared to immunoassays (IA). MS showed significantly higher accuracy and sensitivity, but PPV remained comparable to that of IA.
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biofinder.bsky.social @biofinder.bsky.social · 16/09/2025
3️⃣ In a hypothetical trial aiming to recruit 100 amyloid-positive individuals, there was >40% reduction in number of PET/CSF tests in blood-based approaches, although the initial number of individuals needed were increased.
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biofinder.bsky.social @biofinder.bsky.social · 16/09/2025
2️⃣ Next, we investigated a 2-step approach in which 🩸p-tau217 positive individuals were confirmed with CSF or PET. With this approach, PPV increased to over 90% while maintaining sensitivity.
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biofinder.bsky.social @biofinder.bsky.social · 16/09/2025
1️⃣ In a sample of 2916 cognitively unimpaired individuals we found that plasma p-tau217🩸alone (single-step) was able to determine amyloid-b status with good accuracy and, most importantly, with a positive predictive value (PPV) around 80%.
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biofinder.bsky.social @biofinder.bsky.social · 16/09/2025
🚨Paper alert🚨 New publication in JAMA Neurology led by @gsalvado.bsky.social. In a multicentric study, we examined the clinical utility to assess preclinical #Alzheimer’s disease in cognitively unimpaired individuals. jamanetwork.com/journals/jam... A 🧵...
jamanetwork.com
Plasma P-Tau217 to Identify Preclinical AD
This cohort study evaluates the use of plasma phosphorylated tau 217 in identifying preclinical Alzheimer disease in individuals with amyloid β pathology.
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biofinder.bsky.social @biofinder.bsky.social · 15/09/2025
The study was led by PhD students Pontus Tideman and Linda Karlsson. Thank you also to all co-authors.
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biofinder.bsky.social @biofinder.bsky.social · 15/09/2025
🚨New publication in Nature Medicine! In this study, we demonstrate that a brief, self-administered cognitive test battery can reliably identify individuals with cognitive impairment in a primary care setting. More details: linkedin.com/feed/update/... Full paper: www.nature.com/articles/s41...
linkedin.com
Primary care detection of Alzheimer’s disease using a self-administered digital cognitive test and blood biomarkers - Nature Medicine | The Swedish BioFINDER study
New publication in Nature Medicine!   In this study, led by PhD students Pontus Tideman and Linda Karlsson, we demonstrate that a brief, self-administered cognitive test battery can reliably identify ...
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biofinder.bsky.social @biofinder.bsky.social · 05/09/2025
Big thanks to all co-authors and collaborators: @rikossenkoppele.bsky.social @aitchbi.bsky.social @jorittmo.bsky.social @jwvogel.bsky.social + those not on bksy
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biofinder.bsky.social @biofinder.bsky.social · 05/09/2025
7/🧵 These results suggest that hemispheric difference in Aβ deposition, rather than reduction in connectivity, is associated with asymmetric tau accumulation, highlighting regional vulnerability as a crucial factor in determining the distribution of AD pathology.
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