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Aurore Dupin

@auroredupin.bsky.social
47 followers 38 following 8 posts

Synthetic biologist, cell-free expert, microbaker

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Reposted by Aurore Dupin
Olivier Borkowski @oborkowski.bsky.social · 29/06/2026
Our paper "Active-learning-guided optimization of cell-free systems for genome-wide transcriptomic profiling reveals progressive layers of regulation" is online in Nature Communications! Congrats Lea Wagner, very proud of this work! www.nature.com/articles/s41... #cellfree #AI #T7Phage #synbio
nature.com
Active-learning-guided optimization of cell-free systems for genome-wide transcriptomic profiling reveals progressive layers of regulation - Nature Communications
Cell-free is a powerful platform to unravel biological complexity. Here, the authors used active learning to optimize buffer composition, boosting mRNA 20-fold, enabling cell-free transcriptomics and ...
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Aurore Dupin @auroredupin.bsky.social · 15/06/2026
Today in the lab we used protease inhibitors that are older than France’s first World Cup victory - and incidentally than many of my students. #oldbutgold #scienceisforever
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Reposted by Aurore Dupin
European Synthetic Cell Initiative @syncelleu.bsky.social · 13/04/2026
PhD position in the Niederholtmeyer Lab (Straubing Germany) on feedback control of dynamic condensate assembly and disassembly edu.nl/7v364 Deadline: 26/04 @hniederho.bsky.social #SynCell #SyntheticCell
edu.nl
TUM - PhD position in cell-free synthetic biology (m/f/d)
Studierenden- und Mitarbeiterportal der Technische Universität München
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Aurore Dupin @auroredupin.bsky.social · 16/03/2026
I’m very proud to share that I am a laureate of the Choose France for Science funding. This grant will help me build my lab over the next 3 years in France. Grateful to the @crpp-bordeaux.bsky.social, @cnrs.fr Chimie, @baretjc.bsky.social and others at the CRPP for their support.
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Reposted by Aurore Dupin
CIC biomaGUNE @cicbiomagune.bsky.social · 15/01/2026
This week we welcomed Aurore Dupin (@auroredupin.bsky.social) from CRPP Centre de Recherche Paul Pascal, hosted by Aitor Manteca (@manteka.bsky.social), for a fascinating seminar on surface-based cell-free platform to characterize host-pathogen interactions. #CICbiomaGUNEseminars #SyntheticBiology
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Aurore Dupin @auroredupin.bsky.social · 11/12/2025
I am very proud to share the core project of my post-doc in this beautiful paper. With colleagues at the Weizmann, we built biochips to interrogate antigen-antibody interactions at high-throughput and quantitatively. Check it out at @natnano.nature.com
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Aurore Dupin @auroredupin.bsky.social · 09/12/2025
DNA origami behaving like lipids. A very creative and exciting take from the Simmel Lab @simmellab.bsky.social on self-assembly of compartments. www.nature.com/articles/s41...
nature.com
Self-assembled cell-scale containers made from DNA origami membranes - Nature Materials
Through the programmable self-assembly of lipid-inspired radially symmetric DNA, porous molecular membranes and cell-sized compartments are formed with applications in bottom-up biology and soft robot...
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Aurore Dupin @auroredupin.bsky.social · 09/12/2025
A very cool paper from the Frey lab @physicsoflifelmu.bsky.social. Self-assembly governed by compartment geometry... Testing this in (surface-based) artificial cells would be exciting. Delay-facilitated self-assembly in compartmentalized systems | PNAS www.pnas.org/doi/10.1073/...
pnas.org
Delay-facilitated self-assembly in compartmentalized systems | PNAS
Self-assembly processes in biological and synthetic biomolecular systems are often governed by the spatial separation of biochemical processes. Whi...
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Aurore Dupin @auroredupin.bsky.social · 20/11/2025
Check this paper out: my colleague Ferdi Greiss trapped E.coli chromosomes in microfluidic reservoirs and looked at protein expression at the single molecule level.
rdcu.be
Bacterial chromosome conformation and cell-free gene expression in synthetic 2D compartments
Nature Communications - Chromosomes are long DNA polymers, compacted in cells and fragile once released from the host. Here, authors report on a method to gently transplant bacterial chromosomes...
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Reposted by Aurore Dupin
Laura Alvarez @lauraal.bsky.social · 27/08/2025
It's a pleasure to formally be part of the lab. For many more years of good science & fun! An amazing place to be!🥳 Congrats also to @auroredupin.bsky.social for the CNRS position. So great to have you with us @crpp-bordeaux.bsky.social @univbordeaux.bsky.social www.crpp.cnrs.fr/nos-deux-rec...
crpp.cnrs.fr
Nos deux recrues 2025! - CRPP
Laura Alvarez Frances a été recrutée en juin 2025 en tant que Maitre de Conférence Université de Bordeaux. Elle était sur une chaire UB depuis quelques années et a obtenu sa titularisation ! Aurore Du...
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Aurore Dupin @auroredupin.bsky.social · 31/10/2025
Big news! I am starting my own research lab at the University of Bordeaux as a @cnrs.fr researcher. Excited to turn my dream job into a reality! I will join the @crpp-bordeaux.bsky.social and the fantastic team of @baretjc.bsky.social, Nicolas Martin and @lauraal.bsky.social. Check dupinlab.com.
dupinlab.com
Dupin Lab
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Reposted by Aurore Dupin
JCB @baretjc.bsky.social · 29/06/2025
Last Friday (June 27), with Christophe Danelon (INSA Toulouse), we organized in Bordeaux at @crpp-bordeaux.bsky.social the 1st meeting of SynCell Fr, gathering the French community tackling research activities on Synthetic Cells.
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Aurore Dupin @auroredupin.bsky.social · 31/03/2025
Beautiful study using artificial/living cell communication and droplet interface bilayer (DIB) to look at antibiotic efficacy. onlinelibrary.wiley.com/doi/10.1002/...
onlinelibrary.wiley.com
Engineering a Biohybrid System to Link Antibiotic Efficacy to Membrane Depth in Bacterial Infections
A biohybrid system is presented for mimicking infections in both cellular and tissue contexts. Droplet interface bilayers (DIBs) are spatio-temporally controlled to enable antibiotic addition, withdr...
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Reposted by Aurore Dupin
Matthaeus Schwarz-Schilling @mattschwa.bsky.social · 19/12/2024
There are always many ways to look at your data.
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